| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 535,048 | T→A | 8.2% | intergenic (+33/‑87) | nusG → / → rplK | transcription antipausing factor NusG/50S ribosomal protein L11 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 535,048 | 0 | T | A | 8.2% | 195.9 / 8.2 | 73 | intergenic (+33/‑87) | nusG/rplK | transcription antipausing factor NusG/50S ribosomal protein L11 |
| Reads supporting (aligned to +/- strand): ref base T (33/34); new base A (3/3); total (36/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.18e-01 | |||||||||||
CAATGGTAGTGTCGAAGAAGTTAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAGGCCGGCCAGGCCAACCCAAG > NC_002947/534901‑535196 | cAATGGTAGTGTCGAAGAAGTTAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCtgtg > 6:55374/1‑149 (MQ=255) gtgtCGAAGAAGTTAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCg < 5:55374/148‑1 (MQ=255) tgtCGAAGAAGTTAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCggg < 8:263733/149‑1 (MQ=255) agaacTTATCTACGAAAAGCGCCGCCTGCCGGTTGCGGTGCTCATTTTCGGTCGCTCAACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGCACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGGGtatgg < 4:311239/149‑5 (MQ=255) gTTAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTgtcgt > 2:346728/1‑149 (MQ=255) ttAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGGGtatggga > 4:31723/1‑140 (MQ=255) ttAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCACACAGGGCTGCGGGGtatggga < 3:31723/146‑7 (MQ=255) tACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTg > 3:65640/1‑148 (MQ=255) cGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTg < 4:65640/146‑1 (MQ=255) agagTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATaaaa < 1:89537/149‑1 (MQ=255) gCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCaa < 1:346728/148‑1 (MQ=255) gTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGGGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCgg < 2:106712/149‑1 (MQ=255) ggTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGc > 1:135115/1‑149 (MQ=255) gTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGcc < 2:135115/149‑1 (MQ=255) tGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCACATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGca > 8:154457/1‑147 (MQ=255) tCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCggg < 7:278494/102‑1 (MQ=255) tCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCggg > 8:278494/1‑102 (MQ=255) ttttCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATc < 7:210095/133‑1 (MQ=255) ttttCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATc > 8:210095/1‑133 (MQ=255) tttCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATcc > 1:202116/1‑133 (MQ=255) tttCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATcc < 2:202116/133‑1 (MQ=255) ggTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTc < 6:351777/148‑1 (MQ=255) ggTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTc < 3:301551/148‑1 (MQ=255) ggTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTc > 5:351777/1‑148 (MQ=255) gCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTAcc > 1:196310/1‑149 (MQ=255) ctctACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATc < 2:264293/135‑1 (MQ=255) ctctACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATc > 1:264293/1‑135 (MQ=255) ctctACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATc < 2:259957/135‑1 (MQ=255) ctctACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATc > 1:259957/1‑135 (MQ=255) tctACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCggg > 5:34637/1‑88 (MQ=255) tctACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCggg < 6:34637/88‑1 (MQ=255) tACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGAt > 1:266937/1‑149 (MQ=255) tACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGAt > 5:231955/1‑149 (MQ=255) cTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTCCGTACCCGAttt > 3:58492/1‑149 (MQ=255) tCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGAtttt > 8:221940/1‑149 (MQ=255) tCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGAtttt > 8:112660/1‑149 (MQ=255) cGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTg > 2:315200/1‑148 (MQ=255) ggTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGa < 1:17781/149‑1 (MQ=255) ggTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGa < 1:315200/149‑1 (MQ=255) ggTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGa < 2:196310/149‑1 (MQ=255) cTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGcc < 2:338504/116‑1 (MQ=255) tCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCa > 3:152401/1‑149 (MQ=255) gAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTgtc < 1:106643/78‑1 (MQ=255) gAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTgtc > 2:106643/1‑78 (MQ=255) gAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCAt < 7:221940/148‑1 (MQ=255) gAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCAt < 2:266937/148‑1 (MQ=255) gTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGc < 7:85399/149‑1 (MQ=255) ttCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCt < 4:152401/149‑1 (MQ=255) ttCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCAGATTTTGGAGTAGCTCATGGc > 7:111888/1‑148 (MQ=255) aGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTaa < 7:112660/148‑1 (MQ=255) aaaaGGTCTAGGCGGACGAAGCATCCCATACCCAGCAGCCCTGTCTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAgg > 6:11759/1‑149 (MQ=255) aaaGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGc > 7:239761/1‑149 (MQ=255) tAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACAt > 3:248122/1‑148 (MQ=255) ggCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTAc > 3:2738/1‑144 (MQ=255) ggCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTAc < 4:2738/144‑1 (MQ=255) ggCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATc < 6:231955/147‑1 (MQ=255) gAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGc > 3:33242/1‑147 (MQ=255) gCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTCCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGtt < 4:58492/149‑1 (MQ=255) aTCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAagaaga < 5:82085/121‑1 (MQ=255) aTCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAagaaga > 6:82085/1‑121 (MQ=255) aTCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGtt > 2:204857/1‑147 (MQ=255) aTCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTaa < 4:248122/149‑1 (MQ=255) tCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAg < 4:33242/149‑1 (MQ=255) tCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAg > 4:26926/1‑149 (MQ=255) gacaaaaCCCCGCAGCACACAGGGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAg > 2:345551/7‑149 (MQ=255) gacaaaaCCCCGCAGCACACAGGGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAg > 8:310326/7‑149 (MQ=255) ccATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAggc > 3:347397/1‑149 (MQ=255) aTACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACa > 7:106158/1‑128 (MQ=255) aTACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACa < 8:106158/128‑1 (MQ=255) ccccGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAggccggc < 4:347397/148‑1 (MQ=255) ccccGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAggccggc < 3:26926/148‑1 (MQ=255) cccGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAggccggc > 3:163428/1‑147 (MQ=255) cccGCAGCCCTGTGTGCTGCGGGGTTTAGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAggccggc > 5:17866/1‑147 (MQ=255) cGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTc < 4:298813/113‑1 (MQ=255) tgtgCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAGGCCGGCCAGGCCAACCCAAg < 3:246885/149‑1 (MQ=255) | CAATGGTAGTGTCGAAGAAGTTAACTACGAAAAGAGTCGCCTGCAGGTTGCGGTGCTCATTTTCGGTCGCTCTACTCCGGTGGAGCTCGAGTTCAGCCAGGTCGAAAAGGTCTAGGCGGACGAAGCATCCCATACCCCGCAGCCCTGTGTGCTGCGGGGTTTTGTCGTCACTGGGATAAAACGCAAGTCATCCGGGGAGCCATCAGGCGTTCGTACCCGATTTTGGAGTAGCTCATGGCTAAGAAGATTCAGGCTTACATCAAGCTGCAAGTTAAGGCCGGCCAGGCCAACCCAAG > NC_002947/534901‑535196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |