Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 6,049,292 | G→A | 6.1% | V52M (GTG→ATG) | spoT → | bifunctional (p)ppGpp synthase/hydrolase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 6,049,292 | 0 | G | A | 6.1% | 193.9 / 2.0 | 65 | V52M (GTG→ATG) | spoT | bifunctional (p)ppGpp synthase/hydrolase |
Reads supporting (aligned to +/- strand): ref base G (31/30); new base A (2/2); total (33/32) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01 |
TATAGAAGCCTTGGCCGAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCA > NC_002947/6049147‑6049439 | tataGAAGCCTTGGCCGAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTgg < 7:304089/149‑1 (MQ=255) taGAAGCCTTGGCCGAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGc < 5:299011/148‑1 (MQ=255) gCCTTGGCCGAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCAt > 5:140183/1‑149 (MQ=255) gcggAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTgg < 6:293426/133‑1 (MQ=255) gCCGAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTgg > 5:293426/1‑136 (MQ=255) ccGAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTg < 4:50924/134‑1 (MQ=255) ccGAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTg > 3:50924/1‑134 (MQ=255) cGAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCACGGCCAGcgg > 5:155008/1‑139 (MQ=255) cGAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCACGGCCAGcgg < 6:155008/141‑3 (MQ=255) gAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGa > 7:225959/1‑149 (MQ=255) aCCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGc > 6:66212/1‑142 (MQ=255) aCCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGGGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGc < 5:66212/142‑1 (MQ=255) cTATCTTGGCCCCGAACAGGTCAACGTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCACGGCCAGcgggtgg < 6:287040/130‑7 (MQ=255) cTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGAc > 1:344234/1‑148 (MQ=255) cTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCACGGCCAGcgggtgg > 5:287040/1‑124 (MQ=255) ttGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCa < 4:55421/120‑1 (MQ=255) ggCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCagag > 6:193188/1‑149 (MQ=255) ccccGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGcc < 7:146997/124‑1 (MQ=255) ccccGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGcc > 8:146997/1‑124 (MQ=255) ccccGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGcc < 2:128200/124‑1 (MQ=255) ccccGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGcc > 1:128200/1‑124 (MQ=255) gAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGAt > 6:163379/1‑149 (MQ=255) aCCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCAtg < 4:234932/149‑1 (MQ=255) ccTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATc < 7:170814/128‑1 (MQ=255) ccTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATc > 8:170814/1‑128 (MQ=255) ccTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCAtgc > 1:15633/1‑149 (MQ=255) gTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCAtgctgc < 8:225959/148‑1 (MQ=255) gCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGAtg < 8:84969/149‑1 (MQ=255) cGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGAtgt < 2:344234/149‑1 (MQ=255) cTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATc > 6:849/1‑148 (MQ=255) cTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCg < 5:163379/149‑1 (MQ=255) tATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCg > 5:53017/1‑148 (MQ=255) tttCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGaa < 5:193188/148‑1 (MQ=255) tCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGa < 5:849/148‑1 (MQ=255) cGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCg > 5:176542/1‑149 (MQ=255) gCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCgg > 1:219749/1‑149 (MQ=255) aGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGcc < 2:15633/149‑1 (MQ=255) gCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATggcg > 5:173930/1‑108 (MQ=255) gCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATggcg < 6:173930/108‑1 (MQ=255) gCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCaa < 2:219749/149‑1 (MQ=255) gATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGa < 6:4620/121‑1 (MQ=255) gggCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCGCATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCt > 4:233341/1‑149 (MQ=255) ggCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCt < 6:140183/148‑1 (MQ=255) gCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTca < 6:53017/149‑1 (MQ=255) gCAACGCCGCCGCACTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCACCCCGACATGCACATGGACCATCAGACCCTGATGGCGGCCATGCTGCACGATCTGATCCAAGACACCGGCATCGCAAAGGAACCCCt > 8:234787/1‑147 (MQ=255) cAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGCCACCGGCATCGCCAAGGAAGCCCTcag > 5:332050/1‑149 (MQ=255) cgcAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTca > 8:196918/1‑139 (MQ=255) cgcAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTca < 7:196918/139‑1 (MQ=255) aGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTgg < 3:233341/149‑1 (MQ=255) gTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGc > 8:127401/1‑149 (MQ=255) ccGAGACCTACGTCACCCACCCGCTGCCCGTGGCCAGCATCCTCGCCGACATCCACAAGGACCATCACAGCCTGATGGCGGCAATGCTGCACGATGTGATCGAAGACACAGCAATCGCCAAGGAAGCCCTCAGCCAGCAGtttccc > 2:84293/2‑143 (MQ=255) cccTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACTTGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGTAGACTGGGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGt < 1:84293/149‑1 (MQ=255) tACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGc > 7:6266/1‑149 (MQ=255) tGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGaa > 3:203175/1‑149 (MQ=255) gACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAAt > 3:334155/1‑149 (MQ=255) cccacccGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTg < 1:135832/149‑1 (MQ=255) ccacccGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTgg > 3:168605/1‑149 (MQ=255) ccacccGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTgg > 4:254808/1‑149 (MQ=255) ccacccGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTgg > 4:297178/1‑149 (MQ=255) cacccGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGt < 8:6266/149‑1 (MQ=255) gCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGc > 6:241304/1‑96 (MQ=255) gCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGc < 5:241304/96‑1 (MQ=255) gCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATg > 2:270200/1‑149 (MQ=255) ccGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTc < 7:127401/149‑1 (MQ=255) cGTGGCCAGCATCCTCGCCGACTTGCTCATGGACCATCAGACCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGGATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCa < 7:234787/149‑1 (MQ=255) | TATAGAAGCCTTGGCCGAACGGCTTTCGACCTATCTTGGCCCCGAACAGGTCAACCTGGTTCGGCGTGCCTATTTCTACGCCGAACAGGCCCACGATGGGCAACGCCGCCGCAGTGGCGAGCCCTACGTGACCCACCCGCTGGCCGTGGCCAGCATCCTCGCCGACATGCACATGGACCATCAGAGCCTGATGGCGGCCATGCTGCACGATGTGATCGAAGACACCGGCATCGCCAAGGAAGCCCTCAGCCAGCAGTTTGGCGAGACCGTGGCCGAATTGGTCGATGGGGTCA > NC_002947/6049147‑6049439 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |