| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,080,138 | A→T | 5.2% | I28F (ATC→TTC) ‡ | PP_5332 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,080,138 | 0 | A | T | 5.2% | 233.9 / 2.4 | 77 | I28F (ATC→TTC) ‡ | PP_5332 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (36/37); new base T (2/2); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.86e-01 | |||||||||||
CGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGC > NC_002947/6079990‑6080285 | cGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGa < 1:122260/149‑1 (MQ=255) tGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCg > 3:195562/1‑149 (MQ=255) gTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCcag > 2:161811/1‑149 (MQ=255) tAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACT‑GCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCcag > 8:82739/1‑147 (MQ=255) aaCTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCcagcag < 8:222072/149‑1 (MQ=255) tCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGTGCGCCCTGCTGGgc > 1:179733/1‑149 (MQ=255) cATCTGCCCGGATCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGTGCGCCCTGCTGGgcgatc > 7:297013/1‑144 (MQ=255) cATCTGCCCGGATCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGTGCGCCCTGCTGGgcgatc < 8:297013/147‑4 (MQ=255) aTCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGTGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAgg > 4:9665/1‑149 (MQ=255) tGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTcc > 8:86008/1‑149 (MQ=255) cccGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGTGCGCCCTGCTGGGCGATCAgga < 2:179733/145‑2 (MQ=255) cccGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCt > 2:255025/1‑148 (MQ=255) cccGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTc < 7:86008/149‑1 (MQ=255) cccGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTc < 4:195562/149‑1 (MQ=255) ccGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCt > 7:298230/1‑147 (MQ=255) ccGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCt > 2:139983/1‑147 (MQ=255) ccGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCt > 1:244999/1‑147 (MQ=255) ccGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCa < 3:99804/149‑1 (MQ=255) gggTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGAt < 7:60967/121‑1 (MQ=255) gggTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGAt > 8:60967/1‑121 (MQ=255) gTCCAAGGCCCACT‑GCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTAc < 7:82739/149‑1 (MQ=255) aGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCATCAGCTACcagc < 6:100254/149‑1 (MQ=255) gCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAAAGAGCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCCAcagca > 1:282128/1‑145 (MQ=255) cccACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAgg < 7:271951/122‑1 (MQ=255) cccACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAgg > 8:271951/1‑122 (MQ=255) gCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCg > 2:285562/1‑148 (MQ=255) gCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCg < 1:161811/148‑1 (MQ=255) gCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCg > 3:131347/1‑148 (MQ=255) gCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGACCAAAATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGACCAGCAGGGCGCACAGCTCCTCAGCTACCAGCACGTAGGCg > 7:282516/1‑148 (MQ=255) aatcaatGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAAc < 6:29680/149‑1 (MQ=255) aatcaatGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAAc < 1:255025/149‑1 (MQ=255) tcaatGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGTGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAAccg > 6:308789/1‑149 (MQ=255) tGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACcgccgc > 3:305656/1‑149 (MQ=255) agaagaACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCgctg > 6:97500/1‑149 (MQ=255) aagaaCGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGTGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCgctgct < 5:308789/149‑1 (MQ=255) aagaaCGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCgctgct > 5:246322/1‑149 (MQ=255) aagaaCGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCgctgct > 6:124330/1‑149 (MQ=255) agaaCGCAATGGCTACCTTTCATGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGctgctg < 6:246322/149‑1 (MQ=255) aCGCAATGGCTACCTTTCAGGTCGTAACCGTGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTgg < 3:9665/149‑1 (MQ=255) cGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGc < 4:305656/149‑1 (MQ=255) cGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGc < 1:139983/149‑1 (MQ=255) gCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCt < 8:298230/149‑1 (MQ=255) aaTGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGa < 5:124330/149‑1 (MQ=255) aaTGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGa < 5:97500/149‑1 (MQ=255) tGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCGCAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGc > 7:198766/1‑149 (MQ=255) gCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGa < 1:285562/149‑1 (MQ=255) aCCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGAc > 1:13879/1‑147 (MQ=255) aCCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGAc > 1:308773/1‑147 (MQ=255) aGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATc < 2:263767/149‑1 (MQ=255) aGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATc > 1:263767/1‑149 (MQ=255) gTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTcc < 4:131347/148‑1 (MQ=255) cGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAgg < 2:13879/149‑1 (MQ=255) aCATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCGCAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGt < 8:198766/149‑1 (MQ=255) aCATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTcc < 6:114736/137‑1 (MQ=255) aCATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTcc > 5:114736/1‑137 (MQ=255) tCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAg > 5:72272/1‑131 (MQ=255) tCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAg < 6:72272/131‑1 (MQ=255) aaCTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCgg < 2:164705/149‑1 (MQ=255) aCTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCggg > 5:282181/1‑149 (MQ=255) ctgctgGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCgggg < 6:282181/149‑1 (MQ=255) tgGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGcc < 5:23826/111‑1 (MQ=255) tgGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGcc > 6:23826/1‑111 (MQ=255) gCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAggg < 3:41024/123‑1 (MQ=255) gCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAggg > 4:41024/1‑123 (MQ=255) gCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCgg > 7:208120/1‑149 (MQ=255) cagcagTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTAc < 6:331022/128‑1 (MQ=255) cagcagTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTAc > 5:331022/1‑128 (MQ=255) agcagTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTAc < 6:73057/127‑1 (MQ=255) agcagTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGCGCAAGTCGGTAc > 5:73057/1‑127 (MQ=255) gcagTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCa > 4:310728/1‑51 (MQ=255) gcagTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCa < 3:310728/51‑1 (MQ=255) gcagTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGAc < 4:58223/95‑1 (MQ=255) cGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAgg > 6:878/1‑59 (MQ=255) tGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTg < 8:208120/149‑1 (MQ=255) tGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTg < 2:33602/149‑1 (MQ=255) aaCTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAAc < 2:308773/149‑1 (MQ=255) gATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAgc > 3:27682/1‑149 (MQ=255) gATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAgc > 8:98512/1‑149 (MQ=255) aTCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTg < 5:148949/136‑1 (MQ=255) aTCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTg > 6:148949/1‑136 (MQ=255) aTCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAg < 2:244999/147‑1 (MQ=255) | CGCTGGCGGTAAACTCATTGCATCTGCCCGGGTCCAAGGCCCACTGGCAATCAATGAGAAGAACGCAATGGCTACCTTTCAGGTCGTAACCGAGCAACATGGCGAA‑‑CTCAACTGCTGGCGTATCAGCAGTGACCGTGCCGAACTCCTGATCGCCCAGCAGGGCGCACAGGTCCTCAGCTACCAGCAGGTAGGCGAACCGCCGCTGCTGTGGCTGAGCGACCAGGCCATCTTCCGCCAGGGCAAGTCGGTACGCGCCGGGGTACCGGTGTGCTGGCCATGGTTTGGCAACCTGCAGC > NC_002947/6079990‑6080285 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |