Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 6,158,981 C→T 8.1% intergenic (+318/+550) PP_5739 → / ← PP_5402 hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029476,158,9810CT 8.1% 175.0 / 4.5 62intergenic (+318/+550)PP_5739/PP_5402hypothetical protein/NAD‑dependent acetyl‑CoA synthetase deacetylase subunit
Reads supporting (aligned to +/- strand):  ref base C (28/28);  new base T (3/2);  total (31/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01

CAAGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTC  >  NC_002947/6158836‑6159127
                                                                                                                                                 |                                                                                                                                                   
cAAGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCctc                                                                                                                                                   >  3:43400/1‑148 (MQ=255)
    ccGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAg                                                                                                                                              <  7:285102/149‑1 (MQ=255)
          gTGATCCATTTCGCTTTAGAGGATAAATTTTTCGTTTGGTTGAGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCTACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCt                                                                                                                                       >  6:90998/1‑149 (MQ=255)
             aTCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCTTGAGAGGGCGGCttt                                                                                                                                     <  8:89223/148‑1 (MQ=255)
                     cGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTTATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTATTGCCt                                                                                                                            >  7:119479/1‑149 (MQ=255)
                      gCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCt                                                                                                                            <  7:135288/148‑1 (MQ=255)
                      gCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTc                                                                                                                           <  4:217375/149‑1 (MQ=255)
                                    aTTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGt                                                                                                             <  4:84159/149‑1 (MQ=255)
                                     tttttCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCg                                                                                                                          <  4:320543/135‑1 (MQ=255)
                                     tttttCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCg                                                                                                                          >  3:320543/1‑135 (MQ=255)
                                                    cGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAg                                                                                             >  2:220223/1‑149 (MQ=255)
                                                       cATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCTTGAGAGGGCGGCttttt                                                                                                                                   >  2:292921/1‑108 (MQ=38)
                                                         ttaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCg                                                                                        <  1:220223/149‑1 (MQ=255)
                                                         ttaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCg                                                                                        >  7:67477/1‑149 (MQ=255)
                                                         ttaattaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCg                                                                                        >  4:1237/1‑149 (MQ=255)
                                                            attaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAgt                                                                                            <  8:321563/142‑1 (MQ=255)
                                                            attaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAgt                                                                                            >  7:321563/1‑142 (MQ=255)
                                                            attaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGcc                                                                                      >  1:99085/1‑148 (MQ=255)
                                                            attaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTAGTATCGGTACCGTCGTGCTGCCAGTGTCGcc                                                                                      >  4:313890/1‑148 (MQ=255)
                                                             ttaTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGACGTGCTGCCAGTGTCGCCg                                                                                     >  8:325906/1‑148 (MQ=255)
                                                               aTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACcgtc                                                                                                       >  6:49856/1‑128 (MQ=255)
                                                               aTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACcgtc                                                                                                       <  5:49856/128‑1 (MQ=255)
                                                               aTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGaa                                                                                   <  3:1237/148‑1 (MQ=255)
                                                               aTGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAAc                                                                                  >  8:247713/1‑149 (MQ=255)
                                                                  aTTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGcc                                                                                               >  5:89753/1‑133 (MQ=255)
                                                                  aTTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGcc                                                                                               <  6:89753/133‑1 (MQ=255)
                                                                  aTTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACtt                                                                                <  4:43400/148‑1 (MQ=255)
                                                                   tttAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGa                                                                              <  3:313890/149‑1 (MQ=255)
                                                                           taGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACtgt                                                                       >  2:153951/1‑148 (MQ=255)
                                                                           taGTCCTCAAAGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTTGCCTCGTATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACt                                                                         <  5:90998/147‑1 (MQ=255)
                                                                              tCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAgg                                                                   <  1:153951/149‑1 (MQ=255)
                                                                                cTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAc                                                                 >  2:46601/1‑149 (MQ=255)
                                                                                 tCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTc                                                                                         <  2:330403/124‑1 (MQ=255)
                                                                                 tCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTc                                                                                         >  1:330403/1‑124 (MQ=255)
                                                                                 tCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAc                                                                 >  1:77886/1‑148 (MQ=255)
                                                                                 tCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGACTCGGATAAGTATCGGTACCGACGTGCTGACAGTGTCGCCCAACTTGATCACTGTGATGAc                                                                 >  5:132720/1‑148 (MQ=255)
                                                                                  cAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTAt                                                                                                                 >  4:98415/1‑99 (MQ=255)
                                                                                  cAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTAt                                                                                                                 <  3:98415/99‑1 (MQ=255)
                                                                                   aaCGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGAcc                                                                <  7:247713/147‑1 (MQ=255)
                                                                                          gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCTTGAGAGGGCGGCttttta                                                                                                                                  >  3:30775/1‑73 (MQ=25)
                                                                                          gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCTTGAGAGGGCGGCttttta                                                                                                                                  <  4:30775/74‑2 (MQ=25)
                                                                                          gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGa                                                                                                                        >  8:285930/1‑84 (MQ=255)
                                                                                          gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGa                                                                                                                        <  7:285930/84‑1 (MQ=255)
                                                                                          gACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATc                                                        <  7:325906/148‑1 (MQ=255)
                                                                                           aCTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCAt                                                      <  2:77886/149‑1 (MQ=255)
                                                                                               tttCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGc                                                    <  2:99085/147‑1 (MQ=255)
                                                                                                 tCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTa                                                 >  1:2328/1‑148 (MQ=255)
                                                                                                   aGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAgt                                                                                            <  5:93489/103‑1 (MQ=255)
                                                                                                   aGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAgt                                                                                            >  6:93489/1‑103 (MQ=255)
                                                                                                             cgacgaACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCt                                    <  8:67477/149‑1 (MQ=255)
                                                                                                                   aCCTCTCAATTCGTTGGCTAAAAAGCCTCCATCTCAAGTCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCTTACACTGAACGACCTGTGAc                               <  6:132720/148‑1 (MQ=255)
                                                                                                                     ctctCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACt                                                                         <  6:212587/104‑1 (MQ=255)
                                                                                                                     ctctCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACt                                                                         >  5:212587/1‑104 (MQ=255)
                                                                                                                      tctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTGTCATGCGTACACTCAACCACCTGTGACTGt                            >  6:31404/1‑148 (MQ=255)
                                                                                                                       ctcAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTc                          >  3:83878/1‑149 (MQ=255)
                                                                                                                          aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTGTCATGCGTACACTCAACCACCTGTGACTGTTc                          <  5:31404/146‑1 (MQ=255)
                                                                                                                          aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTa                                                 >  7:2626/1‑123 (MQ=255)
                                                                                                                          aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTa                                                 <  8:2626/123‑1 (MQ=255)
                                                                                                                          aaTTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCgg                        <  4:83878/148‑1 (MQ=255)
                                                                                                                               gTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGt                   <  3:173210/148‑1 (MQ=255)
                                                                                                                                   aaaaaaaaGCCGCCTTGAGAGGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGc               >  7:243246/4‑148 (MQ=255)
                                                                                                                                     tAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAc            >  4:176881/1‑149 (MQ=255)
                                                                                                                                     tAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAAc            >  5:191789/1‑149 (MQ=255)
                                                                                                                                               cgctctCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACGGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCTCGCCAgtc  <  8:119479/147‑1 (MQ=255)
                                                                                                                                               cccTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAgtc  <  2:2328/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
CAAGCCGCAAGTGATCCATTTCGCTTTAGCGGCTAAATTTTTCGTTTGGTTGCGTCATTAATTATGATTTAGCTATAGTCCTCAACGTTCGACTGTTTCAGTACGTCGCCGACGAACCTCTCAATTCGTTGGCTAAAAAGCCGCCCTCTCAAGGCGGCTTTTTTTTGCCTCGGATTCGTATCGGTACCGTCGTGCTGCCAGTGTCGCCGAACTTGATCACTGTGAGGACCAGATTATCATGCGTACACTCAACCACCTGTGACTGTTCGGCCTGTTGGCAACCACGCCAGTC  >  NC_002947/6158836‑6159127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: