Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	590,707	T→C	6.5%	R277R (CGT→CGC)	PP_0500 →	dTDP‑4‑rhamnose reductase‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	590,707	0	T	C	6.5%	177.6 / 2.4	61	R277R (CGT→CGC)	PP_0500	dTDP‑4‑rhamnose reductase‑like protein
Reads supporting (aligned to +/- strand):  ref base T (27/30);  new base C (2/2);  total (29/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01

TCCTCGCCGAGGCCGGCCAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGCCGTACGCATTCTCGAC  >  NC_002947/590559‑590855                                                                                                                                                      |                                                                                                                                                      tCCTCGCCGAGGCCGGCCAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGt                                                                                                                                                       <  2:234909/149‑1 (MQ=255)             ccggccAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCt                                                                                                                                           <  4:136588/149‑1 (MQ=255)              cggccAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCCAGCGCGCCAGgcacgcg                                                                                                                                           >  3:98639/1‑148 (MQ=255)              cggccAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTg                                                                                                                                          <  3:339974/149‑1 (MQ=255)                    aTACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGc                                                                                                                                    <  6:330022/149‑1 (MQ=255)                     tACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGcc                                                                                                                                   <  3:77470/149‑1 (MQ=255)                      aCCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCt                                                                                                                                                   <  7:102655/132‑1 (MQ=255)                      aCCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCt                                                                                                                                                   >  8:102655/1‑132 (MQ=255)                       ccGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCCAGCGCGCCAGGCACGC‑GGCTTgata                                                                                                                                  <  4:98639/148‑4 (MQ=255)                       ccGCAAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCAc                                                                                                                                 >  5:184638/1‑149 (MQ=255)                        cGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCAcc                                                                                                                                >  7:31847/1‑149 (MQ=255)                        cGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCAcc                                                                                                                                >  7:37188/1‑149 (MQ=255)                           cAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACct                                                                                                                               <  8:332309/147‑1 (MQ=255)                            aGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTa                                                                                                                            >  4:139601/1‑149 (MQ=255)                             gCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTAc                                                                                                                           <  3:139601/149‑1 (MQ=255)                             gCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTAc                                                                                                                           <  2:316253/149‑1 (MQ=255)                                  ccGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGAc                                                                                                                      >  1:170527/1‑149 (MQ=255)                                  ccGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGAc                                                                                                                      >  8:306515/1‑149 (MQ=255)                                   cGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCa                                                                                                                                  <  5:211079/136‑1 (MQ=255)                                   cGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCa                                                                                                                                  >  6:211079/1‑136 (MQ=255)                                    gTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTgg                                                                                                                        >  4:170492/1‑145 (MQ=255)                                    gTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTgg                                                                                                                        <  3:170492/145‑1 (MQ=255)                                     ttCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCgg                                                                                                                   >  4:190644/1‑149 (MQ=255)                                          gCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTa                                                                                                             <  5:349495/149‑1 (MQ=255)                                          gCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTa                                                                                                             <  6:124670/149‑1 (MQ=255)                                           cccccACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCAc                                                                                                                                 >  6:186191/1‑129 (MQ=255)                                              ccACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGc                                                                                                         <  2:170527/149‑1 (MQ=255)                                               cACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGc                                                                                                         >  5:224074/1‑148 (MQ=255)                                               cACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGc                                                                                                         >  7:236551/1‑148 (MQ=255)                                                 cgccgcAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCAt                                                                                                      <  5:129357/149‑1 (MQ=255)                                                 cgccgcAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCAt                                                                                                      <  3:190644/149‑1 (MQ=255)                                                 cgccgcAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCAt                                                                                                      <  8:236551/149‑1 (MQ=255)                                                         gCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACg                                                                                              >  3:69146/1‑149 (MQ=255)                                                          cccATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGc                                                                                             <  8:37188/149‑1 (MQ=255)                                                          cccATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGc                                                                                             <  8:31847/149‑1 (MQ=255)                                                                        caggATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCa                                                                               >  2:266550/3‑149 (MQ=255)                                                                             tGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACcggc                                                                          <  6:224074/149‑1 (MQ=255)                                                                                            acaGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCAtt                                                           >  5:23392/1‑149 (MQ=255)                                                                                             caGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTTCCTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCAtt                                                           <  1:266550/149‑1 (MQ=255)                                                                                                 aCGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTc                                                      <  4:69146/149‑1 (MQ=255)                                                                                                  cgcgGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTcc                                                     >  6:320932/1‑149 (MQ=255)                                                                                                          tGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACcg                                                                            <  6:169651/118‑1 (MQ=255)                                                                                                          tGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACcg                                                                            >  5:169651/1‑118 (MQ=255)                                                                                                                gCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCAtt                                                           >  3:49166/1‑129 (MQ=255)                                                                                                                gCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCAtt                                                           <  4:49166/129‑1 (MQ=255)                                                                                                                     aaaaTCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCgttgt                                  <  5:320932/149‑1 (MQ=255)                                                                                                                         tCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGa                              >  4:284159/1‑149 (MQ=255)                                                                                                                            ttCATACCTTCGGTATCAAGCC‑GCGTGCCGGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCAt                                                            <  6:248709/116‑1 (MQ=255)                                                                                                                              cATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACaaa                          <  6:184638/148‑1 (MQ=255)                                                                                                                                     tCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCt                                                >  3:39861/1‑119 (MQ=255)                                                                                                                                     tCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCt                                                <  4:39861/119‑1 (MQ=255)                                                                                                                                     tCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGc                  >  6:363587/1‑149 (MQ=255)                                                                                                                                       ggTATCTAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTG‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTCGACAAAGGCTACGcc                 <  6:192725/148‑1 (MQ=255)                                                                                                                                         tATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGCCGTa              >  5:29205/1‑149 (MQ=255)                                                                                                                                         tATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGCCGTa              >  1:272088/1‑149 (MQ=255)                                                                                                                                           tCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTCATCACCGCCGGTGCCGGCTTCATTGTCTCCCACCTGTGCCATGCGTTGTTGGAc                             >  4:50798/1‑132 (MQ=255)                                                                                                                                           tCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCAACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGAc                             <  3:50798/132‑1 (MQ=255)                                                                                                                                           gcAAGCCAGCGCGCCAGGCACGC‑GGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACaaa                          <  6:237632/134‑1 (MQ=255)                                                                                                                                           gcAAGCCAGCGCGCCAGGCACGC‑GGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACaaa                          >  5:237632/2‑135 (MQ=255)                                                                                                                                               gCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGCCGTACGCAtt        >  7:171571/1‑149 (MQ=255)                                                                                                                                                     gTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAgg                        >  6:5109/1‑128 (MQ=255)                                                                                                                                                     gTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAgg                        <  5:5109/128‑1 (MQ=255)                                                                                                                                                      tGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGCCGTACGCATTCTcgac  <  5:363587/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      TCCTCGCCGAGGCCGGCCAATACCGCCAGCTGGCCGTTCAGGCCCCCACGCCGCAGGCCCATGCCGCGCGCCCGGATGCCAGCGAAGAGCCACAGCACGCGGTACTGGCCTGCAAGAAAATCCTTCATACCTTCGGTATCAAGCC‑GCGTGCCTGGCGCGCTGGCTTGCCACCTCTACTGGACCGGTT‑CTACCGCCATGGCTGACGCCCCCATCCTGATCACCGGCGGTGCCGGCTTCATTGGCTCCCACCTGTGCGATGCGTTGTTGGACAAAGGCTACGCCGTACGCATTCTCGAC  >  NC_002947/590559‑590855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑