| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 654,403 | T→G | 5.9% | K114Q (AAG→CAG) | ctpL ← | methyl‑accepting chemotaxis protein CtpL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 654,403 | 0 | T | G | 5.9% | 202.3 / 3.9 | 69 | K114Q (AAG→CAG) | ctpL | methyl‑accepting chemotaxis protein CtpL |
| Reads supporting (aligned to +/- strand): ref base T (33/30); new base G (2/2); total (36/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
AGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGT > NC_002947/654255‑654549 | aGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCtt < 6:267266/149‑1 (MQ=255) gCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCca < 4:234493/148‑1 (MQ=255) gCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑g > 2:61471/1‑149 (MQ=255) aaGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑Gtt < 7:306851/149‑1 (MQ=255) gggCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCACTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTgg < 1:39045/149‑1 (MQ=255) gggCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGAAGATGGCCAACTGCTGCAATTACGCCCCCAGAACCCCAACGGATTCCACCAGCA‑GGGATTGTGGTTCGCCGGCCACCTTCCCGCCGCCAAGCAGTGC‑GTAgg > 2:116804/1‑149 (MQ=255) aaGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTc > 2:287609/1‑137 (MQ=255) aaGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTc < 1:287609/137‑1 (MQ=255) aaGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGaa < 1:130993/149‑1 (MQ=255) aGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAg < 1:61471/149‑1 (MQ=255) tAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGc < 4:317943/149‑1 (MQ=255) ttGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCGGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAg < 1:238776/149‑1 (MQ=255) ccTCGGCGTTGCCACTGTCGCGGGCGTCTCTTGCCATCTGCTCGAAGTTCGCACCCAGATCCCGCTCGGCTTGCAGAAGCA‑GGGCTGGTTGGTCGCCGGCACGCTTGCCGGCGGCCCGCAGTTC‑GGTGGCGGTGAAGGCGTGCAgga > 6:360388/1‑146 (MQ=255) cTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCgg < 7:123761/131‑1 (MQ=255) cTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCgg > 8:123761/1‑131 (MQ=255) tCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATc > 1:290611/1‑149 (MQ=255) cGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGCCGCCGGCAAGCTGGCCGGCGAcc > 2:201427/1‑113 (MQ=255) cGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGCCGCCGGCAAGCTGGCCGGCGAcc < 1:201427/113‑1 (MQ=255) gCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGtt < 6:107404/118‑1 (MQ=255) ccACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTggg > 5:30910/1‑149 (MQ=255) aCTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgc > 3:88926/1‑149 (MQ=255) cTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGgcg > 1:140202/1‑149 (MQ=255) gCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTtctc < 4:278327/149‑1 (MQ=255) gTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCgg < 2:140202/149‑1 (MQ=255) aTCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTAc > 7:46357/1‑149 (MQ=255) aTCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTAc > 3:271666/1‑149 (MQ=255) cTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCAGGGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTtctc > 1:68393/1‑133 (MQ=255) cTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTgg > 5:159142/1‑119 (MQ=255) cTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTgg < 6:159142/119‑1 (MQ=255) cTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTtctc < 2:68393/132‑1 (MQ=255) tCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCt < 6:354528/100‑1 (MQ=255) tCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCt > 5:354528/1‑100 (MQ=255) tCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGc < 7:40744/134‑1 (MQ=255) tCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGc > 8:40744/1‑134 (MQ=255) tCGAAGTTAGCCCCCAGCTCCCCCTCGGCTTGCAGCAGCA‑GGGCGTGTGGGTCGCCGGCCACCTTGCCGGCGGCCAGCAGTTC‑GTTTGGGGTGTAGGGCGGCCGGCTATACACGGTGGGGGGCAACTTATAGGCCCGCTCTACCGGccc > 2:261068/1‑148 (MQ=255) gAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCa < 6:30910/147‑1 (MQ=255) gCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAg > 4:185825/1‑149 (MQ=255) cccAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGc > 1:62140/1‑149 (MQ=255) ccGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGc < 1:49020/127‑1 (MQ=255) ccGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGc > 2:49020/1‑127 (MQ=255) ccGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTCGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGc > 4:136036/1‑127 (MQ=255) ccGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTCGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGc < 3:136036/127‑1 (MQ=255) ggCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTcc > 2:204963/1‑127 (MQ=255) ttGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGt > 6:327469/1‑149 (MQ=255) cagcagca‑gGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGc > 1:126199/1‑136 (MQ=255) cagcagca‑gGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGc < 2:126199/136‑1 (MQ=255) agcagca‑gGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAgg > 7:28494/1‑72 (MQ=255) agcagca‑gGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAgg < 8:28494/72‑1 (MQ=255) gcagca‑gGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGcc > 4:268793/1‑149 (MQ=255) a‑gGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCAt > 8:66833/1‑149 (MQ=255) a‑gGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCAt < 3:185825/149‑1 (MQ=255) ttGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGt < 5:218522/111‑1 (MQ=255) ttGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGt > 6:218522/1‑111 (MQ=255) ttGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATggc < 2:151587/147‑1 (MQ=255) ttGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATggc > 1:151587/1‑147 (MQ=255) tgGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCAt < 7:69518/141‑1 (MQ=255) tgGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCAt > 8:69518/1‑141 (MQ=255) tgGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATggcggcg < 7:66833/148‑1 (MQ=255) tgGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGGGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATggcggcg < 5:360388/148‑1 (MQ=255) ctggccGCCGGCAAGCTGGCCGGCGACCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTcc > 7:191593/6‑106 (MQ=39) ctggccGCCGGCAAGCTGGCCGGCGACCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTcc < 8:191593/101‑1 (MQ=39) gggTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATggcggcggc < 2:62140/149‑1 (MQ=255) ggTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGcc > 4:132913/1‑149 (MQ=255) gTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTCGGTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGcc > 1:47205/1‑149 (MQ=255) tCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGtt > 7:29392/1‑124 (MQ=255) tCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGtt < 8:29392/124‑1 (MQ=255) ccAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAgg < 5:327469/149‑1 (MQ=255) cAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCt > 3:196270/1‑125 (MQ=255) cAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCt < 4:196270/125‑1 (MQ=255) cTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGt > 8:57862/1‑149 (MQ=255) | AGATGCAGGGTGGCGTCTAGCAAGGGCAGCAAGTAGCGATTGGCCTCGGCGTTGCCACTGTCGCGGGCGTAGCTGGCCATCTGCTCGAAGTTCGCCCCCAGCTCCCGCTCGGCTTGCAGCAGCA‑GGGCTTGTGGGTCGCCGGCCAGCTTGCCGGCGGCCAGCAGTTC‑GTTGGCGGTGAAGGCCTGCAGGCTATCCAGGCTGGGGCGCAACTTCTCGGCCAGCTCTACCGGCCAGTCCGTCAGTGCGGCCTGCAACTGTTGGTTCGCCTCCATGGCGGCGGCCTGGCGCAGGGCGT > NC_002947/654255‑654549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |