| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 156,385 | G→A | 6.1% | intergenic (‑10/+33) | ygdQ ← / ← citN | transport protein/citrate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 156,385 | 0 | G | A | 6.1% | 240.8 / 2.6 | 81 | intergenic (‑10/+33) | ygdQ/citN | transport protein/citrate transporter |
| Reads supporting (aligned to +/- strand): ref base G (43/33); new base A (3/2); total (46/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
CCAGAATCGAGATCATGATGATGTTGTCGATACCGAGGACGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATA > NC_002947/156246‑156532 | ccAGAATCGAGATCATGATGATGTTGTCGATACCGAGGACGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGgcgc > 1:339416/1‑149 (MQ=255) cAGAATCGAGATCATGATGATGTTGTCGATACCGAGGACGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCTGACCGGGGcgcg > 8:102282/1‑149 (MQ=255) gAATCGAGATCATGATGATGTTGTCGATACCGAGGACGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCTGACCGGGGcgcgtt < 7:102282/149‑2 (MQ=255) atgatgatgTTGTCGATACCGAGGACGATCTCAAGCGAGGTAACGGTGAAAAAGGCAACCAAGATTTCCGGGCTGGTCAGACATTCCATGAATTTTCCTTCGAGCGGTAATGGCAACTCGCCCCGGTAACGGAGCGTCGCTTACGtaa > 7:247872/1‑146 (MQ=255) gatgatgTTGTCGATACCGAGGACGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATAc > 5:13667/1‑149 (MQ=255) tgatgTTGTCGATACCGAGGACGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACgg < 6:13667/149‑1 (MQ=255) gatgTTGTCGATACCGAGGACGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTAc > 1:86614/1‑139 (MQ=255) gatgTTGTCGATACCGAGGACGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTAc < 2:86614/139‑1 (MQ=255) cGAGGACGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGacta < 2:339416/149‑1 (MQ=255) ggACGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGactact > 1:221196/1‑148 (MQ=255) cGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGaa > 1:172607/1‑148 (MQ=255) cGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAAc < 2:143667/149‑1 (MQ=255) gATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGaa > 4:243730/1‑147 (MQ=255) gATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACa > 8:184734/1‑149 (MQ=255) tctcAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGTATGTAT‑‑Taaa < 8:214237/135‑1 (MQ=255) tctcAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑Taaa > 7:214237/1‑135 (MQ=255) tctcAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGc > 7:214628/1‑149 (MQ=255) aaGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCggg > 8:34354/1‑148 (MQ=255) ggTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATcc < 7:184734/149‑1 (MQ=255) gTATGGGTGAAAACGCAAACCCTGATTTCCGGGCTGGTAAGCCATTCCTTGTATTTTCCTTCTAGCGGTATTGGAAACGCGCCCCGGTCAGGGCGCGTCGCGTAGGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATccc < 1:237947/149‑1 (MQ=255) tAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATccc > 1:157677/1‑148 (MQ=255) aGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCa < 2:172607/148‑1 (MQ=255) gAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAG > 2:100393‑M1/1‑147 (MQ=255) aaaaGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACgg > 2:52466/1‑104 (MQ=255) aaaaGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCACATCAGCAGT > 8:139748‑M1/1‑149 (MQ=255) aaCCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGcc > 6:134751/1‑147 (MQ=255) aaCCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGcc > 5:142656/1‑147 (MQ=255) aaCCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGa < 3:243730/149‑1 (MQ=255) ccAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCa > 8:42882/1‑149 (MQ=255) ccAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCa > 7:301773/1‑149 (MQ=255) ccAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCa > 7:8155/1‑149 (MQ=255) ccAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCa > 5:86279/1‑149 (MQ=255) ccAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCa > 7:9510/1‑149 (MQ=255) ccAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCa > 8:110538/1‑149 (MQ=255) ccAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCACCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCa > 1:16788/1‑149 (MQ=255) tttCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATg < 6:86279/149‑1 (MQ=255) gTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTATTCTAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGc < 1:100393/147‑1 (MQ=255) tCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATAc > 5:19884/1‑148 (MQ=255) aGCAATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAg < 8:168173‑M2/149‑2 (MQ=255) ccATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgca > 7:34354‑M2/1‑146 (MQ=255) cATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGAACAGGCATACCAgcac < 7:189467‑M2/149‑5 (MQ=255) aTTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAgcact < 1:184183‑M2/149‑6 (MQ=255) tCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCAt < 6:324148/138‑1 (MQ=255) tCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCAt > 5:324148/1‑138 (MQ=255) cATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCtggtatgcctgtgcataatgctcggcgcactgct > 3:234861‑M1/1‑114 (MQ=255) aTGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCtggtatgcctgtgcataatgctcggcgcactgctga < 2:157677‑M1/149‑37 (MQ=255) aTGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAgg > 4:39201/1‑132 (MQ=255) aTGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCa < 7:168173/149‑1 (MQ=255) aTGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCa > 8:245716/1‑149 (MQ=255) tGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCtggtatgcctgtgcataatgctcggcgcactgctgat < 4:234861‑M1/149‑38 (MQ=255) tGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGa < 4:36358/117‑1 (MQ=255) aTTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACtt > 7:177377/1‑148 (MQ=255) aTTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACtt > 5:19451/1‑148 (MQ=255) aTTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACtt > 3:328570/1‑148 (MQ=255) aTTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACtt > 3:236961/1‑148 (MQ=255) cGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGaa < 8:214628/148‑1 (MQ=255) cGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGa < 6:19451/147‑1 (MQ=255) gAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCCGCACTGCCCACTTGAGCGTGAAgc > 3:39082/1‑149 (MQ=255) gCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAgcgc < 7:42882/149‑1 (MQ=255) gCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAgcgc > 5:74635/1‑149 (MQ=255) ggTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtg < 4:1141/149‑1 (MQ=255) gTAATTGCAACGGGCCACGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtga < 8:189467/149‑1 (MQ=255) gTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAgcgc < 4:181870/146‑1 (MQ=255) gTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAgcgc > 3:181870/1‑146 (MQ=255) gTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtga < 8:9510/149‑1 (MQ=255) gTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtga < 8:8155/149‑1 (MQ=255) gTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtga < 6:74635/149‑1 (MQ=255) gTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtga < 6:19884/149‑1 (MQ=255) gtacgcgaCGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtga < 6:165681/140‑1 (MQ=255) aTGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtgatga < 8:177377/149‑1 (MQ=255) ggCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATc > 6:332334/1‑149 (MQ=255) ggCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATc > 5:187783/1‑149 (MQ=255) gcgaCGCGCCCTGACCGGGGCGCGTTGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtga > 3:187029/4‑143 (MQ=255) gcgaCGCGCCCTGACCGGGGCGCGTTGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCtga < 4:187029/140‑1 (MQ=255) gcgaCGCGCCCTGACCGGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCg > 2:209048/4‑149 (MQ=255) aaCGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTg < 2:179037/132‑1 (MQ=255) aaCGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTg > 1:179037/1‑132 (MQ=255) aaCGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGcc > 7:240255/1‑149 (MQ=255) cgcgCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCg > 2:300144/1‑148 (MQ=255) gcgcCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGaa > 6:98732/1‑131 (MQ=255) ccccGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTc < 7:245716/149‑1 (MQ=255) ggTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGAGTGAAGCGCTGATGATCGCCGAACTCGATa < 2:184183/149‑1 (MQ=255) | CCAGAATCGAGATCATGATGATGTTGTCGATACCGAGGACGATCTCAAGCGCGGTAAGGGTGAAAAAGGCAACCCAGATTTCCGGGCTGGTCAGCCATTCCATGTATTTTCCTTCGAGCGGTAATGGCAACGCGCCCCGGTCAGGGCGCGTCGCGTACGTGATACGGATGTAT‑‑TAAAGACTACTGAACAGCGGGAAAATCCCCATCAGCAGTGCGCCGAGCATTATGCACAGGCATACCAGCACTGCCCACTTGAGCGTGAAGCGCTGATGATCGCCGAACTCGATA > NC_002947/156246‑156532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |