Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,052,166 T→A 6.6% T401S (ACC→TCC)  PP_0910 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,052,1660TA 6.6% 174.8 / 3.1 61T401S (ACC→TCC) PP_0910hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (26/31);  new base A (2/2);  total (28/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.55e-01

GCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGAACTGCGGTGTGTGGCAACCTTGGCAACCCGCC  >  NC_002947/1052018‑1052305
                                                                                                                                                    |                                                                                                                                           
gCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGt                                                                                                                                             <  6:200004/149‑1 (MQ=255)
gCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGt                                                                                                                                             >  2:259350/1‑149 (MQ=255)
      ccACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCtc                                                                                                                                       >  1:37581/1‑149 (MQ=255)
      ccACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCtc                                                                                                                                       >  8:220639/1‑149 (MQ=255)
      ccACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGAGCGCtc                                                                                                                                       >  4:327791/1‑149 (MQ=255)
      ccACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGAGCGCtc                                                                                                                                       >  4:322567/1‑149 (MQ=255)
          cGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCtcgtcg                                                                                                                                   >  4:227940/1‑149 (MQ=255)
            tGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGc                                                                                                                                 <  5:260781/149‑1 (MQ=255)
               cacaGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCgg                                                                                                                                  >  6:174252/1‑145 (MQ=255)
               cacaGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCgg                                                                                                                                  <  5:174252/145‑1 (MQ=255)
                   gCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGcccc                                                                                                                          >  2:163029/1‑149 (MQ=255)
                     aCGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGCTGCGCTCGTCGGCCAGCCCCgg                                                                                                                        <  7:220639/149‑1 (MQ=255)
                           tCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCAt                                                                                                                  >  3:92701/1‑149 (MQ=255)
                             aaGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCAt                                                                                                                  <  1:163029/147‑1 (MQ=255)
                                 aGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATg                                                                                                            <  6:150062/149‑1 (MQ=255)
                                   gTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATg                                                                                                            >  5:150998/1‑147 (MQ=255)
                                      gCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATgcagc                                                                                                        <  3:237020/148‑1 (MQ=255)
                                        gggCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATgcagcagc                                                                                                     <  6:157829/149‑1 (MQ=255)
                                         ggCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGAGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATgcagcagca                                                                                                    <  3:322567/149‑1 (MQ=255)
                                         ggCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGAGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATgcagcagca                                                                                                    <  3:327791/149‑1 (MQ=255)
                                                ccGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGc                                                                                                                      <  8:235510/124‑1 (MQ=255)
                                                 cGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTg                                                                                            <  7:132932/149‑1 (MQ=255)
                                                       gCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAgggg                                                                                      >  6:337182/1‑149 (MQ=255)
                                                        cAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGc                                                                                     >  6:1382/1‑149 (MQ=255)
                                                           gAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGc                                                                                     <  4:125614/146‑1 (MQ=255)
                                                           gAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGc                                                                                     >  3:125614/1‑146 (MQ=255)
                                                                 gCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCAACACAGTGGCGGCGTACGCAAGTCCTGGCCGTTGGAGGCGAATACGGTGCCCTCGTCGGCCAGCACCGCGCCCATGTCATCCAGCAGCATGTCGCAGTAGCGGCGGATAAcc                                                                             >  6:296972/1‑148 (MQ=255)
                                                                     tGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGAtt                                                                        <  4:92701/149‑1 (MQ=255)
                                                                       gCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTgg                                                                      >  8:86308/1‑149 (MQ=255)
                                                                        ccACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGc                                                                     >  2:66164/1‑149 (MQ=255)
                                                                         cACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGc                                                                     >  3:195547/1‑148 (MQ=255)
                                                                            tGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAAc                                                                 >  6:259023/1‑149 (MQ=255)
                                                                            tGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAAc                                                                 >  7:295950/1‑149 (MQ=255)
                                                                              aCCGTTTCGGTCAGGCCGATGCCGCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAAcgc                                                               <  5:296972/149‑1 (MQ=255)
                                                                              aCCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAAcgc                                                               >  1:297964/1‑149 (MQ=255)
                                                                              aCCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAAcgc                                                               >  5:268354/1‑149 (MQ=255)
                                                                                cGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCgg                                                             <  6:268354/149‑1 (MQ=255)
                                                                                cGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCgg                                                             <  8:295950/149‑1 (MQ=255)
                                                                                cGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCgg                                                             <  5:1382/149‑1 (MQ=255)
                                                                                 gTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGAATGGCCAACGCggg                                                            <  6:150998/149‑1 (MQ=255)
                                                                                      gCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATaa                                                                               <  3:174961/125‑1 (MQ=255)
                                                                                      gCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATaa                                                                               >  4:174961/1‑125 (MQ=255)
                                                                                       cTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGGTGGCGGCGAATTCGGTGCGCTCGGCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGt                                                      <  3:227940/149‑1 (MQ=255)
                                                                                        tCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCAAGTCATGGAGCAGCAGGTCGCTGTAGGGGCGGCTAACCGGCTTGGCCACCGCGGGTTCGGTg                                                     >  5:12487/1‑149 (MQ=255)
                                                                                          aGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTg                                                     <  2:297964/147‑1 (MQ=255)
                                                                                           ggCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCg                                                  >  1:84095/1‑149 (MQ=255)
                                                                                             ccGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTc                                                <  2:37581/149‑1 (MQ=255)
                                                                                                     ccACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCt                                                                                             <  5:266253/96‑1 (MQ=255)
                                                                                                     ccACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCt                                                                                             >  6:266253/1‑96 (MQ=255)
                                                                                                      cacaGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCggt                                       <  5:337182/149‑1 (MQ=255)
                                                                                                       acaGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGc                                                                                     >  1:340248/1‑102 (MQ=255)
                                                                                                       acaGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGc                                                                                     <  2:340248/102‑1 (MQ=255)
                                                                                                              cggcgTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGAACt                               <  7:86308/149‑1 (MQ=255)
                                                                                                                 cgTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCAGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGAACTGCg                            <  1:66164/149‑1 (MQ=255)
                                                                                                                     cGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGAACTGCGgtgt                        <  4:195547/149‑1 (MQ=255)
                                                                                                                        cAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGAACTGCGGtgtgtg                     >  3:284755/1‑149 (MQ=255)
                                                                                                                             cTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGAACTGCGGTGTGTGGCAAc                >  8:60192/1‑149 (MQ=255)
                                                                                                                                  cGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGAACTGCGGTGTGTGGCAACCTTgg           <  7:60192/149‑1 (MQ=255)
                                                                                                                                   gTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGaa                                 >  6:113878/1‑126 (MQ=255)
                                                                                                                                   gTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGaa                                 <  5:113878/126‑1 (MQ=255)
                                                                                                                                      ggcggcGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCACATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGAACTGCGGTGTGTGGCAACCTTGGCaa        <  1:259350/148‑1 (MQ=255)
                                                                                                                                       gcggcgAATTCGGTGCGCTCGGCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGAACTGCGGTGTGTGGCAACCTTGGCAAc       <  7:55837/148‑1 (MQ=255)
                                                                                                                                           cgAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGAACTGCGGTGTGTGGCAACCTTGGCAACCCGcc  <  5:259023/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                           
GCTTCGCCACCGTGCCACAGCACGGCCTCAAGCAGGTTGCGGGCGCGGCCGTCATGCAGGAACTGGCTATGGCCACTGACCGTTTCGCTCAGGCCGATGCCCCACAGTGGCGGCGTACGCCAGTCCTGGCCGTTGGCGGCGAATTCGGTGCGCTCGTCGGCCAGCCCCGGGCCCATGTCATGCAGCAGCAGGTCGCTGTAGGGGCGGATAACCTGATTGGCCAACGCGGGTTCGGTGGCGTCGGCGGCGGTGGTGAACTGCGGTGTGTGGCAACCTTGGCAACCCGCC  >  NC_002947/1052018‑1052305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑