Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,366,554 C→A 7.5% R49L (CGC→CTC)  PP_1191 ← S4 domain‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,366,5540CA 7.5% 193.2 / 4.5 62R49L (CGC→CTC) PP_1191S4 domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (31/26);  new base A (3/2);  total (34/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCGGACATGGG  >  NC_002947/1366429‑1366702
                                                                                                                             |                                                                                                                                                    
ccTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGc                                                                                                                               <  6:314263/149‑1 (MQ=255)
 cTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCg                                                                                                                              >  8:68872/1‑149 (MQ=255)
    gCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCgg                                                                                                                             <  2:327445/147‑1 (MQ=255)
    gCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCgg                                                                                                                             <  2:322241/147‑1 (MQ=255)
        aGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTc                                                                                                                       <  7:68872/149‑1 (MQ=255)
          gCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGgctgc                                                                                                                         >  5:77023/1‑145 (MQ=255)
          gCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGgctgc                                                                                                                         <  6:77023/145‑1 (MQ=255)
               ccATGTTAATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGaccac                                                                                                                 >  1:51198/1‑148 (MQ=255)
                    ttCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGGTGCTGCTCAACCTTGaa                                                                                                                                   >  5:307811/1‑125 (MQ=255)
                    ttCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGaa                                                                                                                                   <  6:307811/125‑1 (MQ=255)
                      cATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCGCGTCGAgctgctgcc                                                                                                                                             >  1:300338/1‑112 (MQ=255)
                      cATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCGCGTCGAgctgctgcc                                                                                                                                             <  2:300338/113‑2 (MQ=255)
                             gcgcGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGAcc                                                                                                    <  2:51198/147‑1 (MQ=255)
                                   gCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCa                                                                                            >  4:181736/1‑149 (MQ=255)
                                     aTCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGc                                                                                          >  2:246227/1‑149 (MQ=255)
                                       cTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACg                                                                                                             >  3:254577/1‑128 (MQ=255)
                                       cTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACg                                                                                                             <  4:254577/128‑1 (MQ=255)
                                           aCTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTACACGCCCTGCTGCTAAACCTTTAACAGCCGCTGCTGGCCCCCCCCCCCAACCACCCTTACCCCGccagcg                                                                                     >  2:132372/1‑144 (MQ=255)
                                               tCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAAt                                                                                <  6:359178/149‑1 (MQ=255)
                                               tCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGCCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAAt                                                                                <  1:246227/149‑1 (MQ=255)
                                                   tGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTAc                                                                            <  1:132372/149‑1 (MQ=255)
                                                     ccGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTg                                                                          >  6:267121/1‑149 (MQ=255)
                                                       ggctggctGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGCCGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGt                                                                                                  >  5:224196/1‑123 (MQ=255)
                                                       ggctggctGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGt                                                                                                  <  6:224196/123‑1 (MQ=255)
                                                         ctggctggTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCg                                                                      <  5:267121/149‑1 (MQ=255)
                                                          tggctggTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTCCTGCTCgg                                                                     >  7:63356/1‑149 (MQ=255)
                                                            gctggTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGAc                                                                                                     >  2:537/1‑115 (MQ=255)
                                                            gctggTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGcc                                                                   >  8:19389/1‑149 (MQ=255)
                                                                    agcagcagGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGgctgct                                                                                                                        >  7:202565/1‑88 (MQ=255)
                                                                    agcagcagGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGgctgct                                                                                                                        <  8:202565/88‑1 (MQ=255)
                                                                     gcagcagGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGcggcgg                                                          <  2:116172/149‑1 (MQ=255)
                                                                        gcagGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCTGCGGGac                                                       >  7:291764/1‑148 (MQ=255)
                                                                            ggTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGagcagc                                                   >  4:334301/1‑149 (MQ=255)
                                                                               cACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACcaccac                                                                                                              >  8:159658/1‑87 (MQ=255)
                                                                               cACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACcaccac                                                                                                              <  7:159658/87‑1 (MQ=255)
                                                                                aCCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCCCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAg                                               >  8:294391/1‑149 (MQ=255)
                                                                                      tCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTc                                         >  6:169091/1‑149 (MQ=255)
                                                                                        cAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGa                                       >  2:188087/1‑149 (MQ=255)
                                                                                          gggTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATg                                     <  3:181736/149‑1 (MQ=255)
                                                                                               tCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCg                                >  3:231262/1‑149 (MQ=255)
                                                                                                 ggCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCgcggc                                                            >  1:173791/1‑119 (MQ=255)
                                                                                                 ggCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCgcggc                                                            <  2:173791/119‑1 (MQ=255)
                                                                                                     cGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCCCGCCATCGACCGTTCCCCAGCCTCCTTCAATGTACTGCTCGGCATCGCGGCGGGCGCAGCCGAGCTGCTCGATGAGGCGTTTGGa                          >  4:89353/1‑149 (MQ=255)
                                                                                                        gcgcCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCTGGAGCAGCCGAGCTGCTCGATGa                                    <  5:348078/136‑1 (MQ=255)
                                                                                                        gcgcCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGa                                    >  6:348078/1‑136 (MQ=255)
                                                                                                          gcCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGc                     >  5:285968/1‑149 (MQ=255)
                                                                                                          gcCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGc                     <  3:334301/149‑1 (MQ=255)
                                                                                                           cccGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCg                    >  3:19943/1‑149 (MQ=255)
                                                                                                            ccGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGttt                             <  7:217369/139‑1 (MQ=255)
                                                                                                            ccGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGttt                             >  8:217369/1‑139 (MQ=255)
                                                                                                            ccGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCg                    >  2:91462/1‑148 (MQ=255)
                                                                                                              ggCAGCAGCTCGACGCGCTGCTGCCCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGAc                 <  7:294391/149‑1 (MQ=255)
                                                                                                               gcagcaGCGCGTCGAGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCa                                                                                            >  4:321356/1‑73 (MQ=38)
                                                                                                               gcagcaGCGCGTCGAGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCa                                                                                            <  3:321356/73‑1 (MQ=38)
                                                                                                                 agcagcGCGTCGAGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGAACACCACGCCATCGACCGTTACCCAGCCTCCTTCACTGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTGTGGCCAGGcgggcggg              >  2:104595/1‑149 (MQ=255)
                                                                                                                  gcagcTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGt             >  3:106658/1‑149 (MQ=255)
                                                                                                                    agcTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTc           <  5:363629/149‑1 (MQ=255)
                                                                                                                    agcTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTc           <  1:91462/149‑1 (MQ=255)
                                                                                                                     gcTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCg          <  1:188087/149‑1 (MQ=255)
                                                                                                                      cTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCg          >  1:233655/1‑148 (MQ=255)
                                                                                                                        cGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAgg                      >  4:250415/1‑134 (MQ=255)
                                                                                                                        cGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAgg                      <  3:250415/134‑1 (MQ=255)
                                                                                                                           cgcgCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCAGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCGGACATg    <  2:233655/149‑1 (MQ=255)
                                                                                                                             cgcTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCGGACATggg  <  5:169091/149‑1 (MQ=255)
                                                                                                                             |                                                                                                                                                    
CCTCGCTGAGGCTGCCCATGTTCATGCTGGCGCGGGCATCTTCACTGTCCATGCCGGCTGGCTGGTTCAGCAGCAGGGTCACCGGCTCCAGGGTTTCGGCACGGGCGCCCGGCAGCAGCTCGACGCGCTGCTGCTCAACCTTGAACTGCGGCTGCTCGACCACCACGCCATCGACCGTTACCCAGCCTCCTTCAATGTACTGCTCGGCCTCGCGGCGGGAGCAGCCGAGCTGCTCGATGAGGCGTTTGGACAGGCGGACGGGTTCGGACATGGG  >  NC_002947/1366429‑1366702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑