Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,534,879 G→A 7.5% intergenic (+70/‑113) secA → / → argJ protein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,534,8790GA 7.5% 198.2 / 3.9 66intergenic (+70/‑113)secA/argJprotein translocase subunit SecA/glutamate N‑acetyltransferase/amino acid acetyltransferase
Reads supporting (aligned to +/- strand):  ref base G (31/30);  new base A (3/2);  total (34/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.08e-01

CAGAAGCTGGGCCGCAACGAGCCGTGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTAATGGCTGTTGGTCTTGGTCCTTTGCCCACCC  >  NC_002947/1534732‑1535022
                                                                                                                                                   |                                                                                                                                               
cAGAAGCTGGGCCGCAACGAGCCGTGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAgg                                                                                                                                                >  2:113333/1‑149 (MQ=255)
    aGCTGGGCCGCAACGAGCCGTGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTAcc                                                                                                                                            >  5:193397/1‑149 (MQ=255)
             gCAACGAGCCGTGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTc                                                                                                                                   <  4:315073/149‑1 (MQ=255)
               aaCGAGCCGTGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCAAAGGTACCGCGCTCGTCCa                                                                                                                                 >  1:324503/1‑149 (MQ=255)
                  gAGCCGTGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATg                                                                                                                               >  4:53692/1‑148 (MQ=255)
                   aGCCGTGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGaa                                                                                                                             <  6:193397/149‑1 (MQ=255)
                     ccGTGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACg                                                                                                                           >  7:20691/1‑149 (MQ=255)
                        tGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGgc                                                                                                                        <  7:50854/149‑1 (MQ=255)
                         gCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGgcg                                                                                                                       >  6:154891/1‑149 (MQ=255)
                          cTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCTTCCATGAACGGgcg                                                                                                                       <  8:322210/148‑1 (MQ=255)
                                   ttCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTtgt                                                                                                             <  8:20691/149‑1 (MQ=255)
                                   ttCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTtgt                                                                                                             <  2:324503/149‑1 (MQ=255)
                                       ggCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTgggg                                                                                                         >  2:327665/1‑149 (MQ=255)
                                       ggCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTgg                                                                                                           >  1:65179/1‑147 (MQ=255)
                                       ggCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTgg                                                                                                           <  2:65179/147‑1 (MQ=255)
                                          aagaagTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGggcg                                                                                                      >  3:257704/1‑149 (MQ=255)
                                              agTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCt                                                                                                  >  4:226197/1‑149 (MQ=255)
                                               gTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCtt                                                                                                 <  1:327665/149‑1 (MQ=255)
                                                   aaGCATTGCCACGGTCAGACCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCCCCCACAAGGATCGCGCCCGTTCATGGACGAgc                                                                                                                        <  1:306345/122‑1 (MQ=25)
                                                   aaGCATTGCCACGGTCAGAACGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCCCCCACAAGGATCGCGCCCGTTCATGGACGAgc                                                                                                                        >  2:306345/1‑122 (MQ=25)
                                                    aGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTc                                                                                            <  3:53692/149‑1 (MQ=255)
                                                    aGCATTGCCACAGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTcc                                                                                                                                  <  2:324154/111‑1 (MQ=255)
                                                    aGCATTGCCACAGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTcc                                                                                                                                  >  1:324154/1‑111 (MQ=255)
                                                     gCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTtgt                                                                                               >  1:239547/1‑145 (MQ=255)
                                                     gCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTtgt                                                                                               <  2:239547/145‑1 (MQ=255)
                                                       aTTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTcgc                                                                                          >  2:345091/1‑148 (MQ=255)
                                                          gCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGAt                                                                                       <  3:226197/148‑1 (MQ=255)
                                                           ccACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATgg                                                                                     <  2:78535/149‑1 (MQ=255)
                                                           ccACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATgg                                                                                     >  1:78535/1‑149 (MQ=255)
                                                                 tCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGc                                                                                >  3:325362/1‑148 (MQ=255)
                                                                             aTCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCCCCCACAAGGATCGCGCCCGTTCATGGACGAGCGCGGTACCTGTGGGAGCGGCCtt                                                                                                 >  1:273140/1‑119 (MQ=14)
                                                                             aTCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCCCCCACAAGGATCGCGCCCGTTCATGGACGAGCGCGGTACCTGTGGGAGCGGCCtt                                                                                                 <  2:273140/119‑1 (MQ=14)
                                                                                tGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCttttt                                                                >  5:350707/1‑149 (MQ=255)
                                                                                    ccTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGa                                                             >  8:120713/1‑148 (MQ=255)
                                                                                      ttACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTAc                                                                                                                                             >  3:24078/1‑66 (MQ=255)
                                                                                      ttACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTAc                                                                                                                                             <  4:24078/66‑1 (MQ=255)
                                                                                          gTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACatcatc                                                      >  5:30976/1‑149 (MQ=255)
                                                                                              tACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTtgt                                                                                                             <  4:302803/90‑1 (MQ=255)
                                                                                              tACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTtgt                                                                                                             >  3:302803/1‑90 (MQ=255)
                                                                                                cAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGttttt                                                >  5:63114/1‑149 (MQ=255)
                                                                                                 aaGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGtttt                                                 >  8:288784/1‑147 (MQ=255)
                                                                                                 aaGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGtttt                                                 <  7:288784/147‑1 (MQ=255)
                                                                                                    ccTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTa                                            <  7:120713/149‑1 (MQ=255)
                                                                                                    ccTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTa                                            >  8:170367/1‑149 (MQ=255)
                                                                                                       ggggTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAg                                           >  5:118289/1‑147 (MQ=255)
                                                                                                        gggTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGa                                         <  4:257704/148‑1 (MQ=255)
                                                                                                          gTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAgcg                                      <  4:325362/149‑1 (MQ=255)
                                                                                                              cTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCg                                                                          >  1:201623/1‑109 (MQ=255)
                                                                                                              cTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCg                                                                          <  2:201623/109‑1 (MQ=255)
                                                                                                              cTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGctct                                  <  6:63114/149‑1 (MQ=255)
                                                                                                               tttGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATg                                                                                      <  5:329531/96‑1 (MQ=255)
                                                                                                               tttGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATg                                                                                      >  6:329531/1‑96 (MQ=255)
                                                                                                                ttGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGggcgg                                                                                                     >  1:161896/1‑80 (MQ=255)
                                                                                                                ttGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGggcgg                                                                                                     <  2:161896/80‑1 (MQ=255)
                                                                                                                   cGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTAATgg                             <  1:345091/149‑1 (MQ=255)
                                                                                                                     gCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTAATGGCt                           >  8:327242/1‑149 (MQ=255)
                                                                                                                        cTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTAATGGCTGtt                        <  6:30976/149‑1 (MQ=255)
                                                                                                                         tttCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGt                                                                                  >  4:182889/1‑90 (MQ=255)
                                                                                                                             gCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCATTTTTTCTAGGAGCGCTCTAATg                              >  4:150709/1‑138 (MQ=255)
                                                                                                                             gCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCATTTTTTCTAGGAGCGCTCTAATg                              <  3:150709/138‑1 (MQ=255)
                                                                                                                               aaCACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTAATGGCTGttggtcttg                 <  6:350707/149‑1 (MQ=255)
                                                                                                                                    aaGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTAATGGCTGTTGGTCTTGGTCCt            >  3:30084/1‑149 (MQ=255)
                                                                                                                                        ccGCCCCCACAAGGATCGCGCCCGTTCATGGACGAGCGCGGTACCTGTGGGAGCGGCCTTGTGTTGCGAAAGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTAATGGCTGTTGGTCTTGGTCCTTTGc        >  6:76757/1‑149 (MQ=17)
                                                                                                                                         cGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTAATGGCTGTTGGTCTTGGTCCTTTGcc       <  7:170367/149‑1 (MQ=255)
                                                                                                                                              ccACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTAATGGCTGTTGGTCTTGGTCCTTTGCCCAccc  <  4:30084/149‑1 (MQ=255)
                                                                                                                                                  aGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGctc                                   >  7:201155/1‑112 (MQ=255)
                                                                                                                                                  aGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGctc                                   <  8:201155/112‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                               
CAGAAGCTGGGCCGCAACGAGCCGTGCTGGTGTGGTTCGGGCAAGAAGTTCAAGCATTGCCACGGTCAGATCGAGTGATCTGAACCTTACGTTGTACAAGCCTGGGGTCGCTTTGCGGCCCTTTCGCAACACAAGGCCGCTCCCACAGGTACCGCGCTCGTCCATGAACGGGCGCGATCCTTGTGGGGGCGGCCTTGTGTCGCGATGGGGTGCGAAGCGGCCCCTTTTTCGACATCATCGTTTTTTCTAGGAGCGCTCTAATGGCTGTTGGTCTTGGTCCTTTGCCCACCC  >  NC_002947/1534732‑1535022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: