| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 196,795 | G→C | 13.2% | T767T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 196,795 | 0 | G | C | 13.2% | 162.0 / 17.5 | 68 | T767T (ACG→ACC) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base G (30/29); new base C (3/6); total (33/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 | |||||||||||
AAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT > NC_002947/196647‑196937 | aaaCCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACg > 3:124948/1‑149 (MQ=255) aTTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGc > 2:3107/1‑149 (MQ=255) ctttGAATCCGGCAAGACACATGGCATCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCt < 4:221562/143‑1 (MQ=255) cGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCt > 3:221562/1‑145 (MQ=38) gCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGAt > 5:27858/1‑149 (MQ=37) ggCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCaa > 7:39770/1‑149 (MQ=37) gCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCaa < 2:205018/148‑1 (MQ=37) gCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCaa > 1:205018/1‑148 (MQ=37) gCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAAc > 5:176644/1‑149 (MQ=37) aaGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGa < 4:324483/149‑1 (MQ=37) cccAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCg < 6:176644/149‑1 (MQ=34) ccAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACt > 3:98913/1‑146 (MQ=34) ccAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACt > 5:152873/1‑146 (MQ=34) ccAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACt < 4:98913/146‑1 (MQ=34) ccAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACt < 6:152873/146‑1 (MQ=34) ggCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGa > 6:244712/1‑133 (MQ=34) ggCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGa < 5:244712/133‑1 (MQ=34) gCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGAt < 6:27858/149‑1 (MQ=34) cAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCTCCAGACC‑ACGATCAACGACTCGGTCGAt < 1:3107/149‑1 (MQ=21) gTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAAc > 6:261205/1‑132 (MQ=34) gTCGATTTCCAGACACCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAAc < 5:261205/132‑1 (MQ=21) cccGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGa < 8:39770/149‑1 (MQ=34) gTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTc > 6:131260/1‑149 (MQ=32) tCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCg > 3:14587/1‑149 (MQ=32) tCTACAACAACGGTCCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCg > 7:300309/1‑149 (MQ=17) cTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGa < 1:106040/128‑1 (MQ=32) cTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGa > 2:106040/1‑128 (MQ=32) caacaaCGGTTCGACCGTCAGCGTCACCTTCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGa > 1:196508/1‑137 (MQ=17) caacaaCGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGa < 2:196508/137‑1 (MQ=32) caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGa < 4:235139/86‑1 (MQ=33) caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGa > 3:235139/1‑86 (MQ=33) caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATg > 8:260885/1‑110 (MQ=32) caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATg < 7:260885/110‑1 (MQ=32) aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCAACGCGCCCCTGCCGGCGAGCCCGTCGGTCACCg > 5:56809/1‑148 (MQ=12) ggTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAgg < 4:124948/149‑1 (MQ=32) gACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGgcggcg > 7:62248/1‑149 (MQ=32) gTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGAt < 8:265645/143‑1 (MQ=32) gTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGAt > 7:265645/1‑143 (MQ=32) ccATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACAcc > 1:19548/1‑149 (MQ=32) ccATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACAGAAGGCGGCG‑TGATCACCTACAcc < 2:301813/149‑1 (MQ=17) cATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACCGACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACAcc > 1:104247/1‑149 (MQ=17) cATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCAc > 7:150536/1‑141 (MQ=32) cATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCAc < 8:150536/141‑1 (MQ=32) cATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCg > 3:23622/1‑149 (MQ=32) tCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCa < 8:206960/138‑1 (MQ=32) tCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCa > 7:206960/1‑138 (MQ=32) agaACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGAcc < 8:62248/149‑1 (MQ=33) aCGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGACCCTg < 7:26703/149‑1 (MQ=34) cGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGACCCTGa < 5:131260/149‑1 (MQ=34) cGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGACCCTGa < 4:23622/149‑1 (MQ=34) tGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGt < 7:292768/135‑1 (MQ=11) tGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGt > 8:292768/1‑135 (MQ=11) tttCGAACACCTGACCCCGAACCCGACCCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGa < 6:245746/148‑1 (MQ=255) cTTCGAACAGGTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGCTGATCACCTACACCGTGACCCTGAGCAATc < 1:207346/141‑1 (MQ=12) cTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGACCCTGAGCAATc > 2:207346/1‑140 (MQ=32) gAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGACACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGcc > 3:148725/1‑149 (MQ=17) aaCAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCg > 6:170623/1‑149 (MQ=32) gCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGa < 4:148725/149‑1 (MQ=32) cgggccccGCACCCGACGCCGGCG‑CAGACC‑ACGCACAACCACTAGGGAGATTCCCCCCCCGCGACCCTGACGGCGAGCCCGTGGGTAACCGCAGGCGGCG‑TGGTCACCTAAACCCGGAAACGGAGGAATCCAGCCCACCCGCCCGTGAc > 6:254028/5‑149 (MQ=2) aCCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACa < 8:300309/147‑1 (MQ=32) aCCCCGAACCCGACCCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACa < 2:212182/147‑1 (MQ=11) ccccGAACCCGACCCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTg < 4:223996/149‑1 (MQ=17) ccccGAACCCGACCCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCAGTGACAGTg < 2:171958/149‑1 (MQ=12) cccGAACCCGACCCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGa > 7:27549/1‑149 (MQ=17) cccGAACCCGACCCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAACGCGGCG‑TAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGa > 4:256107/1‑149 (MQ=12) cGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGAcc < 4:14587/149‑1 (MQ=32) cGAACCCGACCCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGAcc > 6:276291/1‑149 (MQ=17) cGAACCCGACCCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGAcc < 6:37075/149‑1 (MQ=17) cccGACCCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TAATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGt < 5:276291/149‑1 (MQ=11) | AAACCATTACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACTGGCGGCAACTTCGAACAGCTGACCCCGAACCCGACGCCGGCT‑CAGACC‑ACGATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCG‑TGATCACCTACACCGTGACCCTGAGCAATCCTGCCCAGACGCCGGTGACAGTGACCCTGT > NC_002947/196647‑196937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |