| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,758,291 | G→T | 7.7% | Q449H (CAG→CAT) ‡ | PP_1563 → | terminase large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,758,291 | 0 | G | T | 7.7% | 277.1 / 8.1 | 87 | Q449H (CAG→CAT) ‡ | PP_1563 | terminase large subunit |
| Reads supporting (aligned to +/- strand): ref base G (40/40); new base T (2/5); total (42/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAACACCGCGCGGTACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTGGCCCACGGCGATTGCCCGGTA > NC_002947/1758144‑1758435 | cAACACCGCGCGGTACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAgg > 5:36980/1‑149 (MQ=255)cAACACCGCGCGGTACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAgg > 1:33347/1‑149 (MQ=255) aaCACCGCGCGGTACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCCAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGc > 7:314848/1‑149 (MQ=255) acacCGCGCGGTACAGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGc > 2:348777/1‑148 (MQ=255) cgcgGTACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAg < 6:144795/149‑1 (MQ=255) gcgGTACGGCGAGTTCGATGCACTAGGCGTGCTGACACTGTCTGATGGAGAAGTGACCGTCTTCGAAGTGATCAATGTGGAGATGTGTGAGTTTGCCGGGCGCTT‑CGACTTCCGGGCGTTCGCCTACGACCCGTGGCCTGCCACgggtc < 2:160612/149‑5 (MQ=255) gcgGTACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCCTGCCACgggtc < 3:178806/149‑5 (MQ=255) cgGTACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGtt < 2:129194/149‑1 (MQ=255) ggTACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTg > 2:132443/1‑149 (MQ=255) ggTACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTg > 4:160430/1‑149 (MQ=255) ggTACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTg > 1:51701/1‑149 (MQ=255) tACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGc > 6:337858/1‑149 (MQ=255) cgAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAg > 3:162884/1‑148 (MQ=255) gTTCGATGCTCTAGGCCTGCTGACGCTGACTGATGTAGAAGTCACCGAGTTCGAAGTGATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCGTACGCCTACGAGGCGTGGCAGGCCACGCAGTTGGCCCTGGaa < 2:11751/148‑1 (MQ=255) gTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGaa < 8:314848/148‑1 (MQ=255) ttCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAAt < 6:36980/149‑1 (MQ=255) cGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATg > 1:77740/1‑148 (MQ=255) aCTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGcc > 7:43395/1‑133 (MQ=255) aCTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGcc < 8:43395/133‑1 (MQ=255) aCTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCa > 1:162442/1‑135 (MQ=255) aCTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCa < 2:162442/135‑1 (MQ=255) aCTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCATGAAATGGACGCCg < 1:348777/149‑1 (MQ=255) ctgctgACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCCTGCCACgggtcg < 8:169462/122‑6 (MQ=255) ctgctgACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCCTGCCACgggtcg > 7:169462/1‑117 (MQ=255) gACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCCTGCCACggg < 6:223448/114‑3 (MQ=255) gACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCCTGCCACggg > 5:223448/1‑112 (MQ=255) aCCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGa < 2:77740/148‑1 (MQ=255) aCCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGAt > 2:184797/1‑149 (MQ=255) cccTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATg < 1:132443/149‑1 (MQ=255) ccTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGa < 2:301936/146‑1 (MQ=255) ccTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGa > 1:301936/1‑146 (MQ=255) ctgactgaTGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGt > 3:217751/1‑149 (MQ=255) actgaTGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGtt < 3:160430/147‑1 (MQ=255) actgaTGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGtt < 2:51701/147‑1 (MQ=255) actgaTGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGtt < 1:184797/147‑1 (MQ=255) tgaTGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGc > 2:69868/1‑149 (MQ=255) aaGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGcc > 2:162327/1‑104 (MQ=255) aaGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGcc < 1:162327/104‑1 (MQ=255) aaGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTgcgc > 8:2166/1‑146 (MQ=255) tCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACg > 7:335032/1‑149 (MQ=255) tCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACg > 8:143623/1‑149 (MQ=255) aCCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGa < 6:263107/127‑1 (MQ=255) aCCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGa > 5:263107/1‑127 (MQ=255) aCCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGt > 4:85840/1‑149 (MQ=255) ccGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTg < 2:33347/149‑1 (MQ=255) cGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAg > 4:2891/1‑100 (MQ=255) cGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAg < 3:2891/100‑1 (MQ=255) aCTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTg > 8:334953/1‑146 (MQ=255) ttCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTTGCGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAg > 1:73488/1‑148 (MQ=255) gAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAAcc < 4:162884/148‑1 (MQ=255) aGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTga < 4:217751/149‑1 (MQ=255) aGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTga < 7:2166/149‑1 (MQ=255) tcatcaAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTgagc < 1:56468/149‑1 (MQ=255) catcaAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGcc > 8:124917/1‑73 (MQ=255) catcaAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGcc < 7:124917/73‑1 (MQ=255) atcaAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTgagc > 5:135444/1‑147 (MQ=255) aaGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGccc < 7:143623/149‑1 (MQ=255) aTGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGaaa > 5:200097/1‑147 (MQ=255) aTGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGaaa > 8:35877/1‑147 (MQ=255) aTGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAaga < 3:85840/149‑1 (MQ=255) aTGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAag < 5:146218/148‑1 (MQ=255) aTGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAag > 6:146218/1‑148 (MQ=255) tGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAagag < 7:334953/149‑1 (MQ=255) cGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAgg < 1:69868/148‑1 (MQ=255) gTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATg < 8:86844/98‑1 (MQ=255) gTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATg > 7:86844/1‑98 (MQ=255) gTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAgg > 3:244976/1‑147 (MQ=255) aGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGaa < 7:35877/149‑1 (MQ=255) gTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAg > 1:24209/1‑149 (MQ=255) tGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCTGTTGGCCCTGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGcc < 2:73488/148‑1 (MQ=255) tGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGcc < 8:335032/148‑1 (MQ=255) cGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTgg > 7:287232/1‑149 (MQ=255) gcgcTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGtgc < 2:24209/149‑1 (MQ=255) tCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGCGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAg > 5:354763/1‑149 (MQ=255) gggCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTg < 4:244976/149‑1 (MQ=255) ggCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTCGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTgg < 5:337858/149‑1 (MQ=255) ctacgACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTGGCCCACGGc > 4:223785/1‑148 (MQ=255) cgACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTGGCCCACGGCGAtt > 3:15074/1‑149 (MQ=255) cgACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTGGCCCACGGCGAtt < 6:24808/149‑1 (MQ=255) ccGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGc < 7:275497/124‑1 (MQ=255) ccGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGc > 8:275497/1‑124 (MQ=255) gTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTGGCCCACGGCGATTGCCCgg > 6:351524/1‑149 (MQ=255) ggCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGc > 5:71244/1‑72 (MQ=255) ggCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGc < 6:71244/72‑1 (MQ=255) gCATGCAACGGAGTTGGCCCAGGAATAGGACGCCGTCGGACTGGCTAGGGTTGTGCTGGGCCAGACGGTGCAGAACCTGAGCGAGCCAATGATAGAGGTAGAAGCCCTGGCGCTGCAGCGTTAGCTGGCCGACGGCGATTGGCCTGTa < 2:297141/148‑1 (MQ=255) aGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTgg > 4:196419/1‑126 (MQ=255) aGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTgg < 3:196419/126‑1 (MQ=255) aGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTGGCCCACGGCGATTGc < 5:341427/140‑1 (MQ=255) aGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTGGCCCACGGCGATTGc > 6:341427/1‑140 (MQ=255) | CAACACCGCGCGGTACCGCGAGTTCGATGCACTAGGCCTGCTGACCCTGACTGATGGAGAAGTCACCGACTTCGAAGTCATCAAAGAGGACATGCGTGAGTTTGCCGGGCGCTT‑CGACATCCGGGCCTACGCCTACGACCCGTGGCAGGCCACGCAGTTGGCCCAGGAAATGGACGCCGAGGGACTGCCGATGGTTGAGCTGCGCCAGACGGTGCAGAACCTGAGCGAGCCCATGAAAGAGGTAGAAGCCCTGGTGCTGCAGCGAAAGCTGGCCCACGGCGATTGCCCGGTA > NC_002947/1758144‑1758435 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |