| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,944,530 | T→C | 8.2% | intergenic (+31/+231) | actP‑I → / ← PP_1744 | acetate permease/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,944,530 | 0 | T | C | 8.2% | 270.1 / 10.3 | 97 | intergenic (+31/+231) | actP‑I/PP_1744 | acetate permease/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (41/48); new base C (4/4); total (45/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
TGGTTCTTCTCGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGTTTAATCAC > NC_002947/1944383‑1944674 | tGGTTCTTCTCGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCtt > 1:44525/1‑149 (MQ=255) gTTCTTCTCGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGt > 3:119669/1‑149 (MQ=255) ttctCGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCggg > 6:318033/1‑149 (MQ=255) tctcGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCgggg > 2:31739/1‑149 (MQ=255) ctcGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCgggg < 7:308067/148‑1 (MQ=255) ctcGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCgg < 2:44525/146‑1 (MQ=255) ggTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGc < 7:137641/146‑1 (MQ=255) ggTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGc < 5:318033/146‑1 (MQ=255) ggTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGtt < 4:41114/149‑1 (MQ=255) gTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGttt < 7:18159/149‑1 (MQ=255) aCCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGACAAGCGGGGCGttttc < 3:144579/148‑2 (MQ=255) ccGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTa < 5:358590/149‑1 (MQ=255) cGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCACAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTAt > 1:71929/1‑149 (MQ=255) cAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCATCTGAAAACGCCCCGCTTGTCGGGGCGTTTTTTAttt < 1:53004/149‑1 (MQ=255) cAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTc < 7:274726/149‑1 (MQ=255) aaGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCa > 8:188024/1‑149 (MQ=255) gTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATg < 7:188024/149‑1 (MQ=255) cAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAg > 2:313364/1‑149 (MQ=255) aaGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCGTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTAt < 8:127328/139‑1 (MQ=255) aaGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTAt > 7:127328/1‑139 (MQ=255) aaGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCa > 4:21683/1‑147 (MQ=255) aaGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCa < 3:21683/147‑1 (MQ=255) ggcTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGtt < 7:61451/128‑1 (MQ=255) ggcTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGtt > 8:61451/1‑128 (MQ=255) gcTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTGGGGGCGTTTTTTATTTCATGCAGTCGGCGa < 1:31739/149‑1 (MQ=255) tGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATg > 6:301766/1‑149 (MQ=255) aGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATg < 4:119669/147‑1 (MQ=255) aGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATg < 6:107689/129‑1 (MQ=255) aGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCa < 3:54520/148‑1 (MQ=255) gcTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCgg < 4:217788/129‑1 (MQ=255) gcTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCgg > 3:217788/1‑129 (MQ=255) gcTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCATGGGTGCCTGCGGGGAGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGACACGGTTGTCGGGGCGTTTTTTATTTCATGCAGACGGCGATGGCCTCCAGACAgg > 5:218135/1‑147 (MQ=255) gcTGTTCTTACCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAAAGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAgg < 6:218135/147‑1 (MQ=255) tcCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGt > 1:276625/1‑144 (MQ=255) tcCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGt < 2:276625/144‑1 (MQ=255) ccGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAgg < 7:311483/137‑1 (MQ=255) ccGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAgg > 8:311483/1‑137 (MQ=255) ccGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGGCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGc < 5:301766/149‑1 (MQ=255) gCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCAt < 4:137479/109‑1 (MQ=255) gCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCAt > 3:137479/1‑109 (MQ=255) gTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGAc > 4:227017/1‑125 (MQ=255) gTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGAc < 3:227017/125‑1 (MQ=255) tGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTccc > 4:44581/1‑149 (MQ=255) tGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGACAAGCGGGGCGtttt < 4:187681/92‑1 (MQ=38) tGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGACAAGCGGGGCGtttt < 4:192246/92‑1 (MQ=38) tGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGACAAGCGGGGCGtttt > 3:187681/1‑92 (MQ=38) tGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGACAAGCGGGGCGtttt > 3:192246/1‑92 (MQ=38) cAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGccc < 6:208375/133‑1 (MQ=255) cAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGccc > 5:208375/1‑133 (MQ=255) aGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCg > 1:167106/1‑149 (MQ=255) gACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGt < 1:313364/149‑1 (MQ=255) aCTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGt < 2:71929/148‑1 (MQ=255) gCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAgcg > 5:77128/1‑149 (MQ=255) tGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCt > 5:74300/1‑149 (MQ=255) gggTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCt > 3:62434/1‑148 (MQ=255) ggTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCtt > 4:85950/1‑148 (MQ=255) gCCAGCGGTGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCa > 6:134157/1‑119 (MQ=255) gCCAGCGGTGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCa < 5:134157/119‑1 (MQ=255) cAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTccc > 5:312000/1‑124 (MQ=255) cAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTccc < 6:312000/124‑1 (MQ=255) cAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATgga < 6:74300/149‑1 (MQ=255) aGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATggag > 6:151035/1‑149 (MQ=255) aGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGACCATGCTCACCTCATGTCGTGAGCGCCTTCATgtag > 4:203036/1‑149 (MQ=255) gggCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACg > 8:215722/1‑149 (MQ=255) gCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGc < 6:77128/149‑1 (MQ=255) gTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTcc > 1:222737/1‑85 (MQ=255) gTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTcc < 2:222737/85‑1 (MQ=255) tcGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACAttt > 7:43310/1‑149 (MQ=255) gCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTgg < 5:151035/149‑1 (MQ=255) ctcTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTgg < 3:105546/146‑1 (MQ=255) aCTAACATCAATCCCCTGCAT‑TGAGAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTgggg > 1:299001/1‑149 (MQ=255) tAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTgg > 4:105546/1‑145 (MQ=255) aCATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTgg > 5:319102/1‑143 (MQ=255) aCATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTgg < 6:319102/143‑1 (MQ=255) aCATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTg < 8:43310/149‑1 (MQ=255) cATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTgg < 4:62434/149‑1 (MQ=255) ccTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAg < 7:215722/149‑1 (MQ=255) gCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCa > 1:175938/1‑149 (MQ=255) gCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCa > 2:250948/1‑149 (MQ=255) cAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCa > 3:122582/1‑148 (MQ=255) aataaaaaaCGCCCCGACAAGCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTgg > 2:131639/6‑129 (MQ=38) aT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGTTGCTCTGACCATGCTCCCCTCATGTCGTGAGCGCCTTCATGTAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATa < 3:203036/149‑1 (MQ=255) aT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTgg > 4:120272/1‑128 (MQ=255) aT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTgg < 3:120272/128‑1 (MQ=255) t‑tGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATggagga > 4:310960/1‑115 (MQ=255) t‑tGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATggagga < 3:310960/115‑1 (MQ=255) ataaaaaaCGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATa < 5:329046/145‑1 (MQ=255) taaaaaaCGCCCCGACAAGCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGc < 4:60102/141‑1 (MQ=255) taaaaaaCGCCCCGACAAGCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGc > 3:60102/4‑144 (MQ=255) gAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTg > 8:8195/1‑149 (MQ=255) aaaaCGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTg < 4:174879/65‑1 (MQ=255) aaaaCGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGt < 7:8195/149‑1 (MQ=255) aaaCGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGt < 3:85950/148‑1 (MQ=255) aaaCGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGt < 2:167106/148‑1 (MQ=255) gCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGTTTaa > 2:286818/1‑148 (MQ=255) gCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGTTTaa < 1:286818/148‑1 (MQ=255) ccGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGTTTAATCAc > 6:5659/1‑149 (MQ=255) ccGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGTTTAATCAc < 1:250948/149‑1 (MQ=255) ttGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGc < 6:25379/129‑1 (MQ=255) ttGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGc > 5:25379/1‑129 (MQ=255) | TGGTTCTTCTCGGTCACCGACAAGTCCAAGGCGGCTGAGGATGAGCGCGCGCTGTTCTTCCCGCAGTTCGTGCGTTCGCAGACTGGCCTGGGTGCCAGCGGGGCGGTCTCGCACTAACATCAATCCCCTGCAT‑TGAAAACGCCCCGCTTGTCGGGGCGTTTTTTATTTCATGCAGTCGGCGATGGCCTCCAGACAGGTTGGTGCTCTGCCCATGCTCCCCTCATGTCGTGAGCGCCTTCATGGAGGACGGCACATTTGGGGGCTGGTCAATGAAGCCATACTGTTTAATCAC > NC_002947/1944383‑1944674 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |