| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,092,382 | T→C | 7.6% | intergenic (+28/+63) | deaD → / ← ygiD | ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,092,382 | 0 | T | C | 7.6% | 187.6 / 4.8 | 66 | intergenic (+28/+63) | deaD/ygiD | ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase |
| Reads supporting (aligned to +/- strand): ref base T (33/28); new base C (2/3); total (35/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.14e-01 | |||||||||||
CGCGACAGCTTCAGCTTGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGG > NC_002947/2092235‑2092529 | cgcgACAGCTTCAGCTTGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCtt < 5:114958/149‑1 (MQ=255)cgcgACAGCTTCAGCTTGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCtt < 5:120042/149‑1 (MQ=255) cgACAGCTTCAGCTTGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAg > 4:166342/1‑149 (MQ=255) gcttcagcttGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCgg < 3:168371/149‑1 (MQ=255) cagcttGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑t > 3:268510/1‑149 (MQ=255) cagcttGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑t > 1:172715/1‑149 (MQ=255) ggTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGACCTAAGCCGGGGA‑tttttt < 1:277324/148‑1 (MQ=255) gTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGACCTAAGCCGGGGA‑ttttttc < 8:265315/148‑2 (MQ=255) tCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTa > 3:210807/1‑149 (MQ=255) cGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCggg > 2:225882/1‑149 (MQ=255) gaAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑ttttttt > 7:64332/1‑122 (MQ=255) gaAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑ttttttt < 8:64332/122‑1 (MQ=255) ctgctgTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCGGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGccc > 1:284918/1‑149 (MQ=255) gctgTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCcgc > 3:279510/1‑149 (MQ=255) ttCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTcgcg < 6:218911/134‑1 (MQ=255) atCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTcgcg > 5:218911/2‑135 (MQ=255) ccAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCt > 7:300516/1‑116 (MQ=255) ccAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCt < 8:300516/116‑1 (MQ=255) cAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAaga < 4:279510/148‑1 (MQ=255) gCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGcc > 8:294341/1‑149 (MQ=255) tCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCt > 6:282816/1‑149 (MQ=255) tCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCt > 3:212486/1‑149 (MQ=255) aGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCa < 2:284918/149‑1 (MQ=255) gACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCAAGCCCGCGaaagg > 4:85306/1‑136 (MQ=255) gACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCAAGCCCGCGaaagg < 3:85306/139‑4 (MQ=255) acTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGACCTAAGCCGGGGA‑ttttttc < 4:187203/97‑2 (MQ=38) acTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGACCTAAGCCGGGGA‑ttttttc > 3:187203/1‑96 (MQ=38) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCtt < 6:292398/122‑1 (MQ=255) gcgTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAAc < 4:212486/147‑1 (MQ=255) gTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAaga < 2:86510/129‑1 (MQ=255) gTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGAt < 2:172715/149‑1 (MQ=255) gTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGAt < 4:268510/149‑1 (MQ=255) tggctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATa < 3:166342/149‑1 (MQ=255) ggctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGa > 4:71475/1‑146 (MQ=255) gcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGt < 1:225882/148‑1 (MQ=255) gcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTc > 4:86792/1‑149 (MQ=255) aaGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTcc > 3:35408/1‑148 (MQ=255) aaGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCa > 1:92937/1‑149 (MQ=255) agcTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATccc < 4:35408/149‑1 (MQ=255) cTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCa < 5:282816/149‑1 (MQ=255) tGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCa > 6:209518/1‑122 (MQ=255) tGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCa < 5:209518/122‑1 (MQ=255) tGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAg > 1:206347/1‑149 (MQ=255) gCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAgcgcg > 3:242944/1‑149 (MQ=255) tCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑gg > 7:218593/1‑149 (MQ=255) gCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTg < 3:113586/69‑1 (MQ=255) gCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTg > 4:113586/1‑69 (MQ=255) tACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAgg < 1:49245/101‑1 (MQ=255) tACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAgg > 2:49245/1‑101 (MQ=255) ccGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTaaa > 4:288631/1‑148 (MQ=255) ccGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTaaa < 3:288631/148‑1 (MQ=255) ccGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAAc < 7:294341/149‑1 (MQ=255) ggATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGa < 2:206347/149‑1 (MQ=255) tCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGATGcacc < 3:71475/148‑1 (MQ=255) ccTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGt < 1:17109/109‑1 (MQ=255) ccTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGt > 2:17109/1‑109 (MQ=255) gCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGATGCACCACGcc > 4:54085/1‑148 (MQ=255) aaCGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTAGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGATGCACCACGCCGAACt > 5:146633/1‑149 (MQ=255) aCGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑gg > 6:161692/1‑120 (MQ=255) aCGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑gg < 5:161692/120‑1 (MQ=255) gAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGAt > 4:112885/1‑97 (MQ=255) gAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGGTAAACCCCTGATGCACCACGCCGAACTTg > 5:259405/1‑149 (MQ=255) gAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGATGCACCACGCCGAACTTGc > 7:18925/1‑149 (MQ=255) aaaaaaaTCCCCGACCTAAGCCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGATGCACCACGCCGAACTTGc > 6:191815/2‑149 (MQ=255) aaaaaaTCCCCGGCTTAGGTTGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGATGCACCACGCCGaa < 2:15656/143‑1 (MQ=255) aaaaaaTCCCCGGCTTAGGTGGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGATGCACCACGCCGaa > 1:15656/1‑143 (MQ=255) aTCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCgg < 2:92937/149‑1 (MQ=255) tCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGc < 4:242944/149‑1 (MQ=255) ttAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAgg < 6:259405/149‑1 (MQ=255) | CGCGACAGCTTCAGCTTGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCA‑GGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGG > NC_002947/2092235‑2092529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |