| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,104,902 | G→C | 9.8% | intergenic (‑19/+22) | PP_1879 ← / ← PP_1880 | hypothetical protein/outer membrane autotransporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,104,902 | 0 | G | C | 9.8% | 175.8 / 9.6 | 61 | intergenic (‑19/+22) | PP_1879/PP_1880 | hypothetical protein/outer membrane autotransporter |
| Reads supporting (aligned to +/- strand): ref base G (33/22); new base C (3/3); total (36/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.48e-01 | |||||||||||
CTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCTGCACCGA > NC_002947/2104754‑2105048 | cTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGgcg > 3:277116/1‑149 (MQ=255) ttCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGgcg > 7:244797/1‑148 (MQ=255) cATCGTCCACCACGCTTGGTAGGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCAGCGTCCATCTCCATGTGTCACGCAGGAATCCAGACGGGAAGgcgccgtgg > 6:107948/1‑144 (MQ=255) cATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTga > 8:76133/1‑148 (MQ=255) caccacGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCCAATGCGCCTTccc < 2:172387/149‑1 (MQ=255) cacGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCg > 2:178422/1‑149 (MQ=255) acGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCCAATGCGCCTTCCCttct < 4:215659/149‑4 (MQ=255) gTACTGTTGGTGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTGCTGCGGTTAACGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGTGAAGGCGCATTGGCCTTCCCTCGTTTCttt < 6:36097/148‑1 (MQ=255) tACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTAc > 1:336428/1‑149 (MQ=255) aCGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTAca > 8:142070/1‑148 (MQ=255) ggTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAg < 1:178422/149‑1 (MQ=255) tttggggtACATGAGAGGCCGAGTCCAGTTCAGGGTTTTGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGtt < 4:277116/146‑1 (MQ=255) ttGGGGGGACATGTGAGGCCGAGTCCAGTTCAGGGGTTGGAGGTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGtt < 4:135041/149‑1 (MQ=255) agagagGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGgcgc > 8:247986/1‑149 (MQ=255) ccGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGc > 3:177119/1‑148 (MQ=255) gAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCCAATGCGCCTTccc < 2:241087/112‑1 (MQ=255) gAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCCAATGCGCCTTccc > 1:241087/1‑112 (MQ=255) tCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCAATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGc > 8:36333/1‑149 (MQ=255) cAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGccc > 6:91310/1‑149 (MQ=255) aGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCCCGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCGGCGTTTCTTTACCACTTGTAACGGGCGCCGA‑CGCTCACGccc > 7:240612/1‑148 (MQ=255) aGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATgg < 4:22772/148‑1 (MQ=255) aGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATgg < 7:142070/148‑1 (MQ=255) aGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATgg < 7:217709/148‑1 (MQ=255) aGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGc > 2:81527/1‑149 (MQ=255) aGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGc > 6:221165/1‑149 (MQ=255) aGGCGTTCGAGATCTGCGGTTACCGGAGCGCTTGTTCTGTGACATCCTCAATCACCATGTGTCACGCATGAATACAGAAGGGAAGGCGCAATCGCCATGCCTCGTTTCTATAACAGAAGTAACGGGCGCCGA‑CGCTCACGCCCCATgca > 4:204305/1‑147 (MQ=255) gTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGtt > 5:323583/1‑149 (MQ=255) gAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCaa < 1:81527/148‑1 (MQ=255) aGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGc < 7:36333/149‑1 (MQ=255) tGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCAc < 3:213960/125‑1 (MQ=255) tGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCAc > 4:213960/1‑125 (MQ=255) ccGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATgg < 5:221165/148‑1 (MQ=255) cGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCAt > 7:208838/1‑123 (MQ=255) cGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCAt < 8:208838/123‑1 (MQ=255) cGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCt > 6:80734/1‑149 (MQ=255) caGCGCTAGTTCAGTGTCATCGTCCAACTCCATGTGTCACGCATCAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGCGCGCCGA‑CGCACACGCCCCATGGCTGTACAAGCTTGCTGCCATGGCTg > 4:299281/2‑148 (MQ=255) tgtCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCg > 5:322587/1‑149 (MQ=255) gtCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGACCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGt < 7:76133/149‑1 (MQ=255) aTCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTggg > 2:272071/1‑149 (MQ=255) aTCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTgg < 6:323583/148‑1 (MQ=255) gTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCt < 5:80734/149‑1 (MQ=255) gTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCt < 7:247986/149‑1 (MQ=255) tCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTg > 2:334080/1‑149 (MQ=255) tCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTg > 2:32284/1‑149 (MQ=255) tCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTg > 5:161377/1‑149 (MQ=255) tctcCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCAt > 4:184211/1‑149 (MQ=255) cATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCAttttt > 1:298662/1‑149 (MQ=255) aTGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTc < 6:322587/149‑1 (MQ=255) aTGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTc < 6:161377/149‑1 (MQ=255) aTGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTc < 1:272071/149‑1 (MQ=255) tgtCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGcc > 8:9224/1‑149 (MQ=255) gtCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGccc > 2:289345/1‑149 (MQ=255) tCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCCAAGTCGGCGTGGGCCTGCCATTTTTc < 2:153826/144‑1 (MQ=255) tCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCCAAGTCGGCGTGGGCCTGCCATTTTTc > 1:153826/1‑144 (MQ=255) gCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGc > 7:90227/1‑149 (MQ=255) gaagggaaggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCAccc > 7:292989/1‑149 (MQ=255) agggaaggCCAATGCGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCt > 5:65265/1‑149 (MQ=255) ggaaggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATc < 6:298114/98‑1 (MQ=255) ggaaggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATc > 5:298114/1‑98 (MQ=255) ggaaggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCTg > 8:269545/1‑148 (MQ=255) ggaaggCCAATGCGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGACCGATCACCCCCCATGGCTGTTAAAGCTGCATCCCATGGCTGAAATCGAATTCGGCTTGGGCCTGCAATTTTACGCCCCAGGCTACCCCCAcccatc > 1:262626/1‑146 (MQ=255) aaggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTgg > 2:9208/1‑109 (MQ=255) aaggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTgg < 1:9208/109‑1 (MQ=255) aaggCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCTGCAc > 8:252286/1‑149 (MQ=255) gcgcATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGc > 3:255606/1‑112 (MQ=255) gcgcATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGc < 4:255606/112‑1 (MQ=255) gcgcATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCTGCACCGa > 4:329456/1‑149 (MQ=255) gcATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCa < 5:84164/112‑1 (MQ=255) gcATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCa > 6:84164/1‑112 (MQ=255) | CTTCAACATCGTCCACCACGCTTGGTACGGTTGGGGGGACAAGAGAGGCCGAGTCCAGTTCAGGGGTTGGAGTTCTGCGGTTACCGGAGCGCTTGTTCTGTGTCATCGTCCATCTCCATGTGTCACGCATGAATGCAGAAGGGAAGGCGCATTGGCCTTCCCTCGTTTCTTTACCAGTTGTAACGGGCGCCGA‑CGCTCACGCCCCATGGCTGTTCAAGCTTGCTGCCATGGCTGTAATCGAAGTCGGCGTGGGCCTGCCATTTTTCGCCCCAGGCGACCGCCACCCCTGCACCGA > NC_002947/2104754‑2105048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |