| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,242,681 | T→C | 8.3% | L85P (CTG→CCG) | PP_1978 → | TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,242,681 | 0 | T | C | 8.3% | 199.7 / 7.1 | 72 | L85P (CTG→CCG) | PP_1978 | TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (33/33); new base C (2/4); total (35/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.15e-01 | |||||||||||
GCAGGCCTGACCGTCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGCACATCGAGTTGATGACTGCCGCGATG > NC_002947/2242536‑2242829 | gCAGGCCTGACCGTCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGc < 6:70603/149‑1 (MQ=255) cAGGCCTGACCGTCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGcc > 8:221201/1‑149 (MQ=255) cAGGCCTGACCGTCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGcc > 8:219251/1‑149 (MQ=255) gCCTGACCGTCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCggg < 6:189719/149‑1 (MQ=255) gCCTGACCGTCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCggg < 6:116511/149‑1 (MQ=255) aCCGTCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑tt < 2:215562/149‑1 (MQ=255) aCCGTCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCCCCGGCCAGCGCTCGCCGCCCGGCGccat < 5:224331/149‑3 (MQ=255) aCCGTCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCCCCGGCCAGCGCTCGCCGCCCGGCGccat < 5:106073/149‑3 (MQ=255) cGTCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCt < 2:108275/149‑1 (MQ=255) tCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTAc < 5:116053/149‑1 (MQ=255) cggcTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACctct < 2:303243/149‑1 (MQ=255) ttCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTcgcg > 5:109846/1‑149 (MQ=255) ttCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCCCCGGCCAGCGCTCGCCGCCCGGCGcc > 5:104455/1‑135 (MQ=255) ttCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCCCCGGCCAGCGCTCGCCGCCCGGCGcc < 6:104455/135‑1 (MQ=255) tGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAg > 5:175595/1‑148 (MQ=255) aCTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCgg > 5:30342/1‑149 (MQ=255) ttCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGAAGGCCCCGGCCAGCGCTCGCCGCCCGGCGCC‑ATcga > 6:167376/1‑126 (MQ=25) ttCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGAAGGCCCCGGCCAGCGCTCGCCGCCCGGCGCC‑ATcga < 5:167376/128‑3 (MQ=25) aCAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGc < 2:238532/149‑1 (MQ=255) cAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAg > 3:208441/1‑149 (MQ=255) cAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAg > 7:224438/1‑149 (MQ=255) aaGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGt < 8:224438/149‑1 (MQ=255) ggACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTa > 5:182962/1‑148 (MQ=255) ggACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTAc < 7:219251/149‑1 (MQ=255) ggACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTAc < 7:221201/149‑1 (MQ=255) gCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCtt < 6:350645/149‑1 (MQ=255) ttATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATg > 5:294326/1‑144 (MQ=255) ttATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATg < 6:294326/144‑1 (MQ=255) aTGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGc < 2:8186/147‑1 (MQ=255) gCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCgg > 8:187601/1‑124 (MQ=255) gCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATg > 1:152895/1‑140 (MQ=255) gCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATg < 2:152895/140‑1 (MQ=255) gAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTc > 2:126576/1‑99 (MQ=255) ttCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAAcgc > 5:352591/1‑149 (MQ=255) ccAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTgg > 4:236370/1‑149 (MQ=255) cAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTggg < 3:64391/149‑1 (MQ=255) ttgttgGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTgg < 1:156618/145‑1 (MQ=255) ttgttgGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTgg > 2:156618/1‑145 (MQ=255) gttgGGTGAGCGCCGTGCCTTGCTCGCCCAGATAGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATTCTTGCCCGCTGCCTAACGCGTTGGGCGaaa > 7:122464/1‑149 (MQ=255) ttgGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGt < 4:183187/113‑1 (MQ=255) ttgGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGt > 3:183187/1‑113 (MQ=255) gggTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATg > 6:24018/1‑148 (MQ=255) cgcCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCt < 4:208441/149‑1 (MQ=255) ccTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGa < 5:24018/148‑1 (MQ=255) cTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTa > 1:346215/1‑66 (MQ=255) cTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTa < 2:346215/66‑1 (MQ=255) cTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAgg > 6:269925/1‑149 (MQ=255) tCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAg < 7:254600/131‑1 (MQ=255) tCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAg > 8:254600/1‑131 (MQ=255) tCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTc > 3:4938/1‑149 (MQ=255) gCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCcg > 5:94529/1‑149 (MQ=255) ccAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCcgc > 4:90491/1‑148 (MQ=255) gATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAgg > 2:43756/1‑149 (MQ=255) aTCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGccc < 5:181220/95‑1 (MQ=255) aTCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGccc > 6:181220/1‑95 (MQ=255) ccccAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTgg < 4:4938/149‑1 (MQ=255) ccccAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTgg > 4:175180/1‑149 (MQ=255) ccccAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTgg < 3:236370/149‑1 (MQ=255) cccAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTTCCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGa < 1:286914/128‑1 (MQ=255) cccAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGa > 2:286914/1‑128 (MQ=255) cAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGcc > 7:293030/1‑148 (MQ=255) aaTCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGa < 3:175180/149‑1 (MQ=255) gATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGc < 6:182962/145‑1 (MQ=255) cgcCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGCACATCGAGt < 6:94529/149‑1 (MQ=255) cgcCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGCACATCGAGt < 8:293030/149‑1 (MQ=255) gcCGGGCGGCGAGCGCTGGCCGGGGCCGTTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGCACATCGAGt > 1:192631/1‑149 (MQ=255) gggCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGCACATCGAGTtgat < 2:192631/149‑1 (MQ=255) cgAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTgg < 7:244174/124‑1 (MQ=255) cgAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTgg > 8:244174/1‑124 (MQ=255) cTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAgc > 2:111070/1‑88 (MQ=255) cTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTcc > 7:95983/1‑106 (MQ=255) cTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTcc < 8:95983/106‑1 (MQ=255) tGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGCACATCGAGTTGATGACTGCCGCGATg > 7:163816/1‑149 (MQ=255) | GCAGGCCTGACCGTCGGCGGCTTCTATGCGCACTTCGACAGCAAGGACGAGCTTATGCTCGAAGCGTTCCGCCAGTTGTTGGGTGAGCGCCGTGCCTTGCTCGCCCAGATCGACCCCAATCTCGATGGCGCCGGGCGGCGAGCGCTGGCCGGGGCC‑TTCTACCTCTCGCGCAAGCACCGGGACTGCGAAGTACATGCTTGCCCGCTGCCTAACGCGTTGGGCGAAATGCAGCGCCTGCCGGAGGTCTTCCGCGAGGTGCTGGCCGAGCACATCGAGTTGATGACTGCCGCGATG > NC_002947/2242536‑2242829 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |