Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,290,396 C→T 7.0% intergenic (+21/‑254) pepN → / → PP_2018 aminopeptidase N/BNR domain‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,290,3960CT 7.0% 294.0 / 6.7 100intergenic (+21/‑254)pepN/PP_2018aminopeptidase N/BNR domain‑containing protein
Reads supporting (aligned to +/- strand):  ref base C (45/47);  new base T (4/3);  total (50/50)
Fisher's exact test for biased strand distribution p-value = 7.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.58e-01

Only 100 of 101 total aligned reads displayed.

GCTGACACGCTGGCGCAAGTATGACGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCAATGCATTGA  >  NC_002947/2290249‑2290535
                                                                                                                                                   |                                                                                                                                           
gcTGACACGCTGGCGCAAGTATGACGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTCTGAGCAAGAGTCTGGCGTAATTCTGGTGAAATGCGgccgcc                                                                                                                                             >  7:4833/1‑148 (MQ=255)
        gCTGGCGCAAGTATGACGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGccc                                                                                                                                    <  2:102627/149‑1 (MQ=255)
          tGGCGCAAGTATGACGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCg                                                                                                                                  >  3:45042/1‑149 (MQ=255)
          tGGCGCAAGTATGACGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCg                                                                                                                                  <  3:139240/149‑1 (MQ=255)
            gcgcAAGTATGACGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCgg                                                                                                                                 <  4:45042/148‑1 (MQ=255)
              gcAAGTATGACGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCtt                                                                                                                              >  5:55714/1‑149 (MQ=255)
                aaGTATGACGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTc                                                                                                                            <  8:247031/149‑1 (MQ=255)
                   tATGACGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCATCGGGTGAGTTGTCGAGTGATGTGTATGAGGTTGTTAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCTGCTTTcccc                                                                                                                         <  1:34603/149‑1 (MQ=255)
                     tGACGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCg                                                                                                                        <  7:297723/148‑1 (MQ=255)
                        cGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCTGGGCGGccccaatt                                                                                                                               <  7:152048/138‑5 (MQ=255)
                        cGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCTGGGCGGccccaatt                                                                                                                               >  8:152048/1‑134 (MQ=255)
                         gATGCGCTTCTGGCGCTTAGTAAGGGGGCCCTGGCGCGCATTCTGGCTTCGGGTGTTTTGTCCTGTGATGTGTATGAGGTGGTCACCAAGAGTCTGGCGTAATTCTGGTCAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGa                                                                                                                   <  6:55714/149‑1 (MQ=255)
                          aTGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGac                                                                                                                  <  7:191040/149‑1 (MQ=255)
                             cgcgTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTATTTCTGGTTAATTGGGGCCGCCGAGCGGCCCCGGCTTTCCCCGGCCGacaac                                                                                                               <  1:222409/149‑1 (MQ=255)
                              gcgTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGacaaca                                                                                                              <  8:224037/149‑1 (MQ=255)
                              gcgTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGacaac                                                                                                               >  7:224037/1‑148 (MQ=255)
                              gcgTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGacaac                                                                                                               >  4:135548/1‑148 (MQ=255)
                              gcgTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTATGGTGAATTGGGGCCTACCAGAGGCCCCGGCTTTCCCCGGCCGacaac                                                                                                               >  3:242126/1‑148 (MQ=255)
                               cgTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCATGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCACCGGCCCCGGCTTTACCCGGCGGacaaca                                                                                                              >  7:235600/1‑148 (MQ=255)
                                 tCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGc                                                                                                                                <  2:42907/128‑1 (MQ=255)
                                 tCAGGCGCGTATGAAGGGTGAGCTGGAGCGCATTGTGGCTTCGGTTCAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTCGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACaaaa                                                                                                           <  3:213060/149‑1 (MQ=255)
                                    ggCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGc                                                                                                                                      <  5:247643/119‑1 (MQ=255)
                                    ggCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGc                                                                                                                                      >  6:247643/1‑119 (MQ=255)
                                         tgatgaAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGc                                                                                                                                         <  2:277141/111‑1 (MQ=255)
                                         tgatgaAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGc                                                                                                                                         >  1:277141/1‑111 (MQ=255)
                                         tgatgaAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAacac                                                                                                   >  6:302509/1‑149 (MQ=255)
                                            tgaAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACAcccc                                                                                                >  5:288769/1‑149 (MQ=255)
                                                gggTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACcccgccc                                                                                            >  2:159091/1‑149 (MQ=255)
                                                   tGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGtt                                                                                         >  5:245089/1‑149 (MQ=255)
                                                     tgctgtcgcgcATTGTGGTTTGGGGTGTTTTGCCCTGTTTTGTTTTTTTGTTTGTGAGAAATAGTGTGGCTAAATTTTGGTTATTTGGGGCCGCCCCGCGCCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTg                                                                                        <  6:245089/141‑1 (MQ=255)
                                                       cTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTAc                                                                                     >  1:19239/1‑149 (MQ=255)
                                                          gAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTcc                                                                                  <  3:135548/149‑1 (MQ=255)
                                                                aTTCTGGTTTCGGGTGAGTCTGCGAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTGTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCaaa                                                                            <  8:235600/149‑1 (MQ=255)
                                                                aTTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGtt                                                                                         <  5:187617/136‑1 (MQ=255)
                                                                aTTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGtt                                                                                         >  6:187617/1‑136 (MQ=255)
                                                                  tCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTg                                                                                        <  3:191291/135‑1 (MQ=255)
                                                                  tCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTg                                                                                        >  4:191291/1‑135 (MQ=255)
                                                                    tGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATc                                                                        >  7:302789/1‑149 (MQ=255)
                                                                      gcgtCGGGTGAGTTGTCAAGTCATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGAAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATccc                                                                      <  6:40121/146‑1 (MQ=255)
                                                                      gCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATccc                                                                      <  8:302789/149‑1 (MQ=255)
                                                                        ttCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGt                                                                                          >  3:194398/1‑127 (MQ=255)
                                                                        ttCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGt                                                                                          <  4:194398/127‑1 (MQ=255)
                                                                        ttCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGCGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCg                                                                    >  4:200652/1‑149 (MQ=255)
                                                                                 gTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCaaa                                                                            <  4:171644/132‑1 (MQ=255)
                                                                                 gTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGAtct                                                           >  7:273567/1‑149 (MQ=255)
                                                                                  ttGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACTACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGAtctc                                                          >  1:125403/1‑149 (MQ=255)
                                                                                    gTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATctcc                                                         <  6:288769/148‑1 (MQ=255)
                                                                                     tCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCTGAACAACGGCCCCGGATTTCCCCGGCCGAAAACAAAAAATAACAACCCGCCCGTTGTAATACCGAAAAAATACACGCTAGGaagtcat                                                        >  7:221075/1‑142 (MQ=255)
                                                                                     tCCAGTGATGTGTATGAGGTTGTGAGCAAAAGTATGGCGTAATTATGGTGAATTTGGGCCGCCCATCGGCCCCGGCTTTACCCGGCCGACAAAAAAACATAACACCCCGCCCGTTGTAATACCGCAAACATCCCCCCTACGATctcca                                                        >  1:203570/1‑147 (MQ=255)
                                                                                       cAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATctcctc                                                       >  8:45509/1‑147 (MQ=255)
                                                                                            aTGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTAt                                                >  2:339927/1‑149 (MQ=255)
                                                                                            aTGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTAt                                                >  1:281247/1‑149 (MQ=255)
                                                                                              ttgtATGAGGTTGTGAGCTAGATTCTGGCGTAATTCTGCTGTATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCTGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTg                                              <  8:4833/148‑1 (MQ=255)
                                                                                               tgtATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTAc                                                                                     >  2:342092/1‑109 (MQ=255)
                                                                                               tgtATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTAc                                                                                     <  1:342092/109‑1 (MQ=255)
                                                                                                 tATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCa                                            <  1:159091/148‑1 (MQ=255)
                                                                                                 tATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCa                                            <  5:302509/148‑1 (MQ=255)
                                                                                                 tATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAg                                           >  1:325148/1‑149 (MQ=255)
                                                                                                  aTGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTAtt                                               <  6:313348/144‑1 (MQ=255)
                                                                                                  aTGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTAtt                                               >  5:313348/1‑144 (MQ=255)
                                                                                                  aTGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAgg                                          >  3:170157/1‑149 (MQ=255)
                                                                                                   tGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGc                                         <  2:19239/149‑1 (MQ=255)
                                                                                                    gAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCaa                                                     >  2:46168/1‑136 (MQ=255)
                                                                                                    gAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCaa                                                     <  1:46168/136‑1 (MQ=255)
                                                                                                     aGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCgg                                                                                                                       <  5:155814/69‑1 (MQ=255)
                                                                                                     aGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCgg                                                                                                                       >  6:155814/1‑69 (MQ=255)
                                                                                                           tgAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGa                                  <  4:170157/148‑1 (MQ=255)
                                                                                                            gAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTccc                                                                                 >  8:29701/1‑100 (MQ=255)
                                                                                                            gAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGAt                                 >  4:300621/1‑148 (MQ=255)
                                                                                                            gAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATc                                <  8:273567/149‑1 (MQ=255)
                                                                                                             aGCATGAGGCTGGCGTACTTGTGGGTCATGGGGGCCCCCCCGGGGCCCCGGCTTTCCCCCGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCa                               <  2:314772/149‑1 (MQ=255)
                                                                                                             aGCAAGTGGCTGCCGTAATTCTGGAGACTTGTGGCCGCCCAGCGGCCCAGGCTTTCCCCGGCCCACAACAAAAAATACCACCCCGCCCGTTGTACTACCCCACACATACCCGCTACGATCTCCTCAAGCTATTTCAGGCGTCTAGATCa                               <  4:258907/149‑1 (MQ=255)
                                                                                                             aGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATc                                <  2:281247/148‑1 (MQ=255)
                                                                                                              gCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAg                              >  3:89548/1‑149 (MQ=255)
                                                                                                               cAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAAc                                                                           <  2:69270/103‑1 (MQ=255)
                                                                                                               cAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAAc                                                                           >  1:69270/1‑103 (MQ=255)
                                                                                                                         gCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTg                      <  3:322720/146‑1 (MQ=255)
                                                                                                                         gCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCa                    >  7:7569/1‑148 (MQ=255)
                                                                                                                          cGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCaaa                  <  2:325148/149‑1 (MQ=255)
                                                                                                                            tAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGc                >  1:105369/1‑149 (MQ=255)
                                                                                                                               ttCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCt              >  6:16064/1‑148 (MQ=255)
                                                                                                                                 cTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGc            <  4:89548/148‑1 (MQ=255)
                                                                                                                                  tGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCaa          >  5:188999/1‑149 (MQ=255)
                                                                                                                                  tGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCaa          >  8:147548/1‑149 (MQ=255)
                                                                                                                                   ggTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCAAt         >  3:214142/1‑149 (MQ=255)
                                                                                                                                    gTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCa                                                                              >  8:267658/1‑79 (MQ=255)
                                                                                                                                    gTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCa                                                                              <  7:267658/79‑1 (MQ=255)
                                                                                                                                    gTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCctc                                      >  7:79568/1‑119 (MQ=255)
                                                                                                                                    gTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTGCAGAAAGCCTgat           <  7:45509/146‑3 (MQ=255)
                                                                                                                                    gTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGc            <  1:54314/145‑1 (MQ=255)
                                                                                                                                    gTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGc            >  2:54314/1‑145 (MQ=255)
                                                                                                                                      gAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCAATGCa      >  5:217474/1‑149 (MQ=255)
                                                                                                                                       aaTTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTa                                                                 >  3:245684/1‑89 (MQ=255)
                                                                                                                                       aaTTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTa                                                                 <  4:245684/89‑1 (MQ=255)
                                                                                                                                        aTTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCAATGCAtt    <  3:200652/149‑1 (MQ=255)
                                                                                                                                         ccggggCCGCTGGGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCAATGCAtt    >  2:215413/3‑148 (MQ=255)
                                                                                                                                         ccggggCCGCTGGGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCAATGCAtt    >  2:183877/3‑148 (MQ=255)
                                                                                                                                          cggggCCGCTGGGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCAATGCATTGa  <  1:215413/148‑1 (MQ=255)
                                                                                                                                          cggggCCGCTGGGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCAATGCATTGa  <  1:183877/148‑1 (MQ=255)
                                                                                                                                          cggggCCGCTGGGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCAATGCATTGa  >  7:129079/2‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                           
GCTGACACGCTGGCGCAAGTATGACGATGCGCGTCAGGCGCTGATGAAGGGTGAGCTGGAGCGCATTCTGGCTTCGGGTGAGTTGTCCAGTGATGTGTATGAGGTTGTGAGCAAGAGTCTGGCGTAATTCTGGTGAATTGGGGCCGCCCAGCGGCCCCGGCTTTCCCCGGCCGACAACAAAACATAACACCCCGCCCGTTGTACTCCCGCAAACATCCCCGCTACGATCTCCTCAAGCTATTGCAGGCCTCTAGATCAGGCTTTCTGCAAAGCCTGCAATGCATTGA  >  NC_002947/2290249‑2290535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: