Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,392,617 C→G 7.5% I382M (ATC→ATG)  PP_2097 → sensory box protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,392,6170CG 7.5% 294.1 / 9.3 92I382M (ATC→ATG) PP_2097sensory box protein
Reads supporting (aligned to +/- strand):  ref base C (39/46);  new base G (4/3);  total (43/49)
Fisher's exact test for biased strand distribution p-value = 7.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCTGCTCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGCCT  >  NC_002947/2392470‑2392762
                                                                                                                                                   |                                                                                                                                                 
gctgctCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGatca                                                                                                                                                  >  2:35563/1‑149 (MQ=255)
  tgctCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGatcatc                                                                                                                                                >  5:20336/1‑149 (MQ=255)
  tgctCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGatcatc                                                                                                                                                >  7:260037/1‑149 (MQ=255)
   gctCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCg                                                                                                                                               >  3:270913/1‑149 (MQ=255)
    ctctACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGc                                                                                                                                              <  3:144286/149‑1 (MQ=255)
    ctctACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGc                                                                                                                                              <  5:131148/149‑1 (MQ=255)
    ctctACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGc                                                                                                                                              <  3:9553/149‑1 (MQ=255)
       tACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGccac                                                                                                                                           >  8:105923/1‑149 (MQ=255)
         cAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGccacc                                                                                                                                          >  6:278102/1‑148 (MQ=255)
         cAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGAGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATGATCGccacc                                                                                                                                          <  8:293616/148‑1 (MQ=255)
          aGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGccacctg                                                                                                                                        <  7:105923/149‑3 (MQ=255)
              tGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCt                                                                                                                                     >  5:209864/1‑148 (MQ=255)
               gTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTc                                                                                                                                    >  4:70062/1‑148 (MQ=255)
               gTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTc                                                                                                                                    <  2:157164/148‑1 (MQ=255)
               gTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTc                                                                                                                                    >  1:157164/1‑148 (MQ=255)
                  cagccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAg                                                                                                                                 <  8:35833/148‑1 (MQ=255)
                   agccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGCTCATCGCCACCAACCTCAAggg                                                                                                                               >  3:223817/1‑149 (MQ=255)
                   agccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAggg                                                                                                                               >  1:147967/1‑149 (MQ=255)
                   agccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAgg                                                                                                                                <  5:202003/148‑1 (MQ=255)
                    gccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAgggg                                                                                                                              >  3:343435/1‑149 (MQ=255)
                     ccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAggggg                                                                                                                             >  3:255757/1‑149 (MQ=255)
                     ccagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGACGCGACCCAGGTGTCGATCATCGCCACCAACCTCAAggggg                                                                                                                             >  4:79524/1‑149 (MQ=255)
                      cagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGggt                                                                                                                            <  7:57700/149‑1 (MQ=255)
                      cagcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTAGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTCGCGCTGATCGCCACCAACCTCAAGGgtgt                                                                                                                            >  2:240691/1‑149 (MQ=255)
                       agcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGggtg                                                                                                                           <  6:209864/149‑1 (MQ=255)
                       agcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGggtg                                                                                                                           <  5:278102/149‑1 (MQ=255)
                       agcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGggtg                                                                                                                           <  6:20336/149‑1 (MQ=255)
                       agcGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGggtg                                                                                                                           <  8:260037/149‑1 (MQ=255)
                         cGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGggtggt                                                                                                                         <  8:80898/149‑1 (MQ=255)
                                    cctggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATGATCGccacctg                                                                                                                                        <  5:281153/123‑3 (MQ=255)
                                    cctggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATGATCGccacctg                                                                                                                                        >  6:281153/1‑121 (MQ=255)
                                    cctggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCt                                                                                                                                     <  4:131910/126‑1 (MQ=255)
                                    cctggccctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCt                                                                                                                                     >  3:131910/1‑126 (MQ=255)
                                          cctggTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAATGGGGTGGTCAGCACGTTCAACGCCg                                                                                                        <  3:79524/149‑1 (MQ=255)
                                              gTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGt                                                                                                      <  4:223817/147‑1 (MQ=255)
                                                 gCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCg                                                                                                  <  4:343435/148‑1 (MQ=255)
                                                     aGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACg                                                                                              >  1:27459/1‑148 (MQ=255)
                                                       cGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAGCTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCAt                                                                                           <  5:148541/149‑1 (MQ=255)
                                                       cGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCAt                                                                                           <  3:182313/149‑1 (MQ=255)
                                                        gTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATg                                                                                          >  2:140447/1‑149 (MQ=255)
                                                          aCTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGggtg                                                                                                                           <  2:294021/114‑1 (MQ=255)
                                                          aCTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGggtg                                                                                                                           >  1:294021/1‑114 (MQ=255)
                                                           cTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTc                                                                                       >  8:80764/1‑149 (MQ=255)
                                                               cGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGtt                                                                                   <  6:290919/149‑1 (MQ=255)
                                                                     gCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCgg                                                                             >  8:307710/1‑149 (MQ=255)
                                                                       aGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCg                                                                                      <  6:108153/138‑1 (MQ=255)
                                                                         gTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCag                                                                         <  4:270913/149‑1 (MQ=255)
                                                                          tCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCagc                                                                        >  3:113370/1‑149 (MQ=255)
                                                                            aGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAg                                                                                                                                 <  2:311480/90‑1 (MQ=255)
                                                                             gCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCagcgaa                                                                     <  2:147967/149‑1 (MQ=255)
                                                                             gCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCagcgaa                                                                     <  1:35563/149‑1 (MQ=255)
                                                                              cGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGc                                                                                             <  6:267716/124‑1 (MQ=255)
                                                                              cGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGc                                                                                             >  5:267716/1‑124 (MQ=255)
                                                                              cGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCagcgaag                                                                    <  3:70062/149‑1 (MQ=255)
                                                                                aGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCagcgaagcg                                                                  <  1:140447/149‑1 (MQ=255)
                                                                                     tCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAAc                                                                                                                                       <  8:274166/75‑1 (MQ=255)
                                                                                     tCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAAc                                                                                                                                       >  7:274166/1‑75 (MQ=255)
                                                                                       gTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGcc                                                           <  7:80764/149‑1 (MQ=255)
                                                                                       gTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGcc                                                           >  2:313264/1‑149 (MQ=255)
                                                                                        ttGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCg                                                          >  7:99511/1‑149 (MQ=255)
                                                                                                cACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGcc                                                  <  8:99511/149‑1 (MQ=255)
                                                                                                   ccACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCtt                                                >  3:331878/1‑148 (MQ=255)
                                                                                                     acaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGtt                                                       >  2:242411/1‑139 (MQ=255)
                                                                                                     acaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGtt                                                       <  1:242411/139‑1 (MQ=255)
                                                                                                     acaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCtt                                                <  1:6898/146‑1 (MQ=255)
                                                                                                     acaACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCtt                                                >  2:6898/1‑146 (MQ=255)
                                                                                                      caaccaacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTg                                               >  7:288702/1‑146 (MQ=255)
                                                                                                       aaccaacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGa                                           >  3:269150/1‑149 (MQ=255)
                                                                                                          caacTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCt                                        >  4:221758/1‑149 (MQ=255)
                                                                                                            acTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTgg                                      <  1:313264/149‑1 (MQ=255)
                                                                                                            acTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTgg                                      <  7:307710/149‑1 (MQ=255)
                                                                                                                   aGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGcc                               >  4:339920/1‑149 (MQ=255)
                                                                                                                     tgtgCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCgg                             <  2:27459/149‑1 (MQ=255)
                                                                                                                       tgCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCggag                           >  4:323469/1‑149 (MQ=255)
                                                                                                                       tgCTGGATGCAGCGACCCAGGTGGCGTTCATCGCCACCAACCTCATGGGGGTGTTCAGGACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGGCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCggag                           <  7:164043/149‑1 (MQ=255)
                                                                                                                         cTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTg                                                                                                     >  4:20683/1‑73 (MQ=255)
                                                                                                                         cTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTg                                                                                                     <  3:20683/73‑1 (MQ=255)
                                                                                                                            gATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCt                      >  5:5343/1‑149 (MQ=255)
                                                                                                                               gCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCt                                        <  8:196665/128‑1 (MQ=255)
                                                                                                                                 cgcgACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCg                                                          <  7:333997/108‑1 (MQ=255)
                                                                                                                                 cgcgACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCg                                                          >  8:333997/1‑108 (MQ=255)
                                                                                                                                 cgcgACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCggag                           <  1:291874/139‑1 (MQ=255)
                                                                                                                                 cgcgACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCggag                           >  2:291874/1‑139 (MQ=255)
                                                                                                                                 cgcgACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAAcc                 >  7:77869/1‑149 (MQ=255)
                                                                                                                                    gACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGc              <  8:288702/149‑1 (MQ=255)
                                                                                                                                     aCCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTgg                                      <  3:25360/124‑1 (MQ=255)
                                                                                                                                     aCCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTgg                                      >  4:25360/1‑124 (MQ=255)
                                                                                                                                     aCCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCg             <  6:5343/149‑1 (MQ=255)
                                                                                                                                      cccAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGt            <  4:255757/149‑1 (MQ=255)
                                                                                                                                        ttggTGGCGATGATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGc                       >  5:225750/3‑136 (MQ=255)
                                                                                                                                        ttggTGGCGATGATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGc                       <  6:225750/134‑1 (MQ=255)
                                                                                                                                        ttggTGGCGATGATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGc          >  6:243494/3‑149 (MQ=255)
                                                                                                                                              gCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGc    >  1:148865/1‑149 (MQ=255)
                                                                                                                                                gATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGCCt  >  2:174985/1‑149 (MQ=255)
                                                                                                                                                gATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGCCt  >  7:148581/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
GCTGCTCTACAGCCTGTTCAGCCAGCGTCAGCGCGCCCTGGCCCTGGTCGCTCAGCGTACTGCCGAGTTGCAGGTCAGCGAGCAGTCGTTGCGTGGCACCCACAACCAACTGCGCAGTGTGCTGGATGCCGCGACCCAGGTGGCGATCATCGCCACCAACCTCAAGGGGGTGGTCAGCACGTTCAACGCCGGTGCCGAACGCATGCTCGGTTACGCGGCCAGCGAAGCGATCGGCCGGTTGCGCCTTGAAGACCTGGTACTGCCGGAGGAGCTGAACCTGCGTGCCCAGGCCT  >  NC_002947/2392470‑2392762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑