| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,405,350 | T→C | 6.0% | V116A (GTG→GCG) ‡ | PP_2108 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,405,350 | 0 | T | C | 6.0% | 285.7 / 6.4 | 99 | V116A (GTG→GCG) ‡ | PP_2108 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (50/43); new base C (3/3); total (53/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.25e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
TTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAG > NC_002947/2405202‑2405498 | ttGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGt < 2:304045/149‑1 (MQ=255)ttGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGt < 2:76308/149‑1 (MQ=255) gcgcCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCg > 7:11647/1‑149 (MQ=255) cgcCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCgg < 3:97426/149‑1 (MQ=255) gcCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGt > 7:330089/1‑149 (MQ=255) gcCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGCACCCATCTGTc > 5:25710/1‑146 (MQ=255) gcCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGCACCCATCTGTc < 6:25710/146‑1 (MQ=255) ccTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTg < 2:86173/149‑1 (MQ=255) cTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGa > 7:174492/1‑149 (MQ=255) cGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CTGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGAcg < 8:330089/148‑1 (MQ=255) gATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGc > 5:9454/1‑133 (MQ=255) gATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGc < 6:9454/133‑1 (MQ=255) ccAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGTGCAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCgg > 1:73297/1‑148 (MQ=255) ccAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACGGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCa > 6:192766/1‑149 (MQ=255) cAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCgcag < 2:257121/149‑1 (MQ=255) ggCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTg > 6:244214/1‑113 (MQ=255) cTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGt < 8:11647/149‑1 (MQ=255) cTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGt < 1:94495/149‑1 (MQ=255) ggcggcGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCTAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCgcgc < 5:90466/139‑1 (MQ=255) ggcggcGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCgcgc > 6:90466/1‑139 (MQ=255) cggcggACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTg < 4:231405/149‑1 (MQ=255) ttCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAACTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATgcg > 2:86025/1‑149 (MQ=255) cACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGt < 2:116086/96‑1 (MQ=255) aCGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGATAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCa > 1:326904/1‑148 (MQ=255) aCGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCa > 7:160447/1‑148 (MQ=255) aCGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCa > 3:288750/1‑148 (MQ=255) ggTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAg > 6:107072/1‑149 (MQ=255) ggTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAg > 7:50361/1‑149 (MQ=255) ggTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAg < 8:174492/149‑1 (MQ=255) cGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGAcc < 4:165372/133‑1 (MQ=255) cGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGAcc > 3:165372/1‑133 (MQ=255) cGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCg > 2:99126/1‑149 (MQ=255) aGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGc < 8:50361/149‑1 (MQ=255) t‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTAc < 8:160447/149‑1 (MQ=255) gCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTg > 3:256350/1‑149 (MQ=255) gCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTg > 2:83165/1‑149 (MQ=255) ccGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGACAGCGGCTACCTGGc > 4:22661/1‑149 (MQ=255) ccGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGCACCCATCTGTc < 5:152520/86‑1 (MQ=255) cgcgcgAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGATAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCg < 2:326904/149‑1 (MQ=255) gcgcgAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCgg < 1:141095/149‑1 (MQ=255) gcgcgAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCgg < 1:99126/149‑1 (MQ=255) gcgAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCggg‑g < 5:192766/149‑1 (MQ=255) gcgAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCggg‑g < 4:256350/149‑1 (MQ=255) cgAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑Gc < 2:73297/149‑1 (MQ=255) gagaCCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCt > 7:320726/1‑149 (MQ=255) aCCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGc > 7:40823/1‑148 (MQ=255) gTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCaaag > 3:90976/1‑147 (MQ=255) gTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCa < 4:90976/146‑1 (MQ=255) ggCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCgcaggc < 7:166457/96‑1 (MQ=255) ggCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCgcaggc > 8:166457/1‑96 (MQ=255) gCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGaa < 5:172333/146‑1 (MQ=255) gCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGaa > 6:172333/1‑146 (MQ=255) tCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGTATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCAtt > 8:143496/1‑148 (MQ=255) tCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGc < 2:339971/127‑1 (MQ=255) tCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGc > 1:339971/1‑127 (MQ=255) aGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGCTGCATCTGTCGGTGACGCGAGGCACGCCGCGCAGGCAGGTGCTGACAATGCGCAAAGGCAGCCGCTACCAGGCTGG‑GCTGCAATGAAGCGCAATGAc > 2:70649/1‑149 (MQ=255) gCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACg > 3:148656/1‑149 (MQ=255) aaaGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGAGGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACgg > 2:46693/1‑147 (MQ=255) aGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGgcagc < 5:107072/149‑1 (MQ=255) gTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGgcagc > 5:50237/1‑148 (MQ=255) ggTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAggg > 6:135327/1‑149 (MQ=255) cccTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATg > 1:220366/1‑149 (MQ=255) ttCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCgg > 3:310783/1‑109 (MQ=255) ttCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCgg < 4:310783/109‑1 (MQ=255) ttCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTc > 5:239146/1‑149 (MQ=255) cGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTc < 5:135327/147‑1 (MQ=255) aTCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATAAAGCGCATTGACGGCAGCAAGGGGATGTTCGTAt < 1:46693/149‑1 (MQ=255) cAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGc > 8:320695/1‑149 (MQ=255) aGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCt < 8:320726/149‑1 (MQ=255) aGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCt < 6:50237/149‑1 (MQ=255) aGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCt < 4:288750/149‑1 (MQ=255) gCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCt < 6:261335/105‑1 (MQ=255) cTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTg > 6:322439/1‑148 (MQ=255) cTGATCCTGGAACTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGt < 1:86025/149‑1 (MQ=255) aTCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGGCGCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGta < 1:83165/148‑1 (MQ=255) ccTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCt > 5:46033/1‑90 (MQ=255) ccTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCt < 6:46033/90‑1 (MQ=255) tGGAATTCGACGGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATaaa > 3:107851/1‑149 (MQ=255) tGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCAt < 7:95940/111‑1 (MQ=255) tGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACgg > 2:171558/1‑117 (MQ=255) tGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATaaa > 7:251598/1‑149 (MQ=255) cGACAGATGCACCCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGaa < 2:229420/98‑1 (MQ=255) cGACAGATGCACCCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGaa > 1:229420/1‑98 (MQ=255) gACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCa < 6:216859/92‑1 (MQ=255) gACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCa > 5:216859/1‑92 (MQ=255) gACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAgtgt > 5:57827/1‑149 (MQ=255) gACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAgtgt > 4:155930/1‑149 (MQ=255) gACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAgtg < 5:322439/148‑1 (MQ=255) aCAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAATCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTc > 4:42082/1‑149 (MQ=255) aCAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTc < 7:320695/149‑1 (MQ=255) aGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTc > 1:102025/1‑147 (MQ=255) aTGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCgg < 1:341874/80‑1 (MQ=255) aTGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCgg > 2:341874/1‑80 (MQ=255) ggTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTg > 4:80078/1‑148 (MQ=255) gTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGtatata < 2:169598/130‑1 (MQ=255) gTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGtatata > 1:169598/1‑130 (MQ=255) gTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAg < 6:197024/144‑1 (MQ=255) gTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAg > 5:197024/1‑144 (MQ=255) gTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGaa < 6:195700/149‑1 (MQ=255) tGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAg < 3:42082/149‑1 (MQ=255) | TTGATCGGTGGCGCCTCCGATAGCCAGCACGTGCAAGGGCTGGCGGCGGACTTCACGGTGATCGAGGT‑CAGCCCGCGCGAGACCGTCCGGCGAATCAGCAAAAGTGCGGTGCCCTTCGATCAGCTGATCCTGGAATTCGACAGATGGGTGCATCTGTCGGTGACGCGCGGCACGCCGCGCAGGCAGGTGCTGACCATGCGCAAAGGCAGCGGCTACCTGGCGGG‑GCTGCAATGAAGCGCATTGACGGCAGCAAGGGGATGTTCGTATGCTGTATATAAATACAGTGTCGAGGTGAAG > NC_002947/2405202‑2405498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |