| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,415,310 | A→T | 6.3% | intergenic (+46/‑15) | tusA‑II → / → pdxB | sulfurtransferase/erythronate‑4‑phosphate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,415,310 | 0 | A | T | 6.3% | 389.2 / 11.1 | 126 | intergenic (+46/‑15) | tusA‑II/pdxB | sulfurtransferase/erythronate‑4‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (63/55); new base T (2/6); total (65/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.29e-01 | |||||||||||
Only 100 of 127 total aligned reads displayed.
CCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCCTGCTGGTGCGCT > NC_002947/2415162‑2415457 | ccgcGACATCCCCAAGTTCTGCAACTTCCTGGGCCACTAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCa < 1:177076/149‑1 (MQ=255) cccAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGagag > 4:143262/1‑149 (MQ=255) ccAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGAGCTCCCCAGACAGGAGAgc > 6:167860/1‑149 (MQ=255) aGTTCTGCTACTTCCTGTGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAACGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCTCCTGTCTGGGGAgcgca < 1:236638/149‑2 (MQ=255) aGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTTCACTGCGCTCTCCTGTCTGGGGAgcgca < 1:21902/149‑2 (MQ=255) aGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCTCCTGTCTGGGGAgcgca < 7:153856/149‑2 (MQ=255) aGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCTCCTGTCTGGGGAgcgca < 7:15989/149‑2 (MQ=255) aGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCTCCTGTCTGGGGAgcgca < 7:23803/149‑2 (MQ=255) gCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCt > 7:197224/1‑148 (MQ=255) cAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGa > 7:44866/1‑149 (MQ=255) aaCTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGa > 1:18503/1‑148 (MQ=255) aaCTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGa > 2:326898/1‑148 (MQ=255) cTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGAc > 6:325844/1‑124 (MQ=255) cTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGc < 3:143262/149‑1 (MQ=255) cTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATACGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGc < 4:227074/149‑1 (MQ=255) tGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGcc > 8:140083/1‑149 (MQ=255) gCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCcgac < 6:273435/149‑1 (MQ=255) ctcttgctgctGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGga > 7:73808/6‑122 (MQ=255) ctcttgctgctGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGga < 8:73808/117‑1 (MQ=255) ctcttgctgctGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCcgacga > 4:212071/6‑149 (MQ=255) cACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCcgacga < 8:197224/149‑1 (MQ=255) tgctgctGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGaa < 3:212071/147‑1 (MQ=255) gctgctGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACa > 4:167841/1‑149 (MQ=255) ctgcAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCcgac < 8:240442/138‑1 (MQ=255) ctgcAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATccc > 3:65574/1‑149 (MQ=255) atcagcaAGAGGACTACGGCACTTTCCTTTACTGGATCCGCAAGAAAGCCGAATGAATCGCTCTGGAACAAGCACGTAGTTGAGCCTACACTGCGCTATCCTGTCTGGGGAgcgca > 2:63782/3‑115 (MQ=255) agcagcaAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGTGTTGAGCCTACACTGCGCTCTCCTGTCTGGGGAgcgca < 1:63782/116‑2 (MQ=255) agcaAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTc > 4:176194/1‑149 (MQ=255) agagGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATg < 3:176194/149‑1 (MQ=255) ggACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGgag < 2:82774/100‑1 (MQ=255) cGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCcttct > 7:88841/1‑149 (MQ=255) gCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCcttctt > 6:70757/1‑149 (MQ=255) ggCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCa < 2:271871/149‑1 (MQ=255) cACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAgg < 1:326898/149‑1 (MQ=255) cACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAgg < 5:110381/149‑1 (MQ=255) tttCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGtt > 7:152245/1‑149 (MQ=255) cTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCg < 3:167841/148‑1 (MQ=255) cTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACGGCGCTCTCCTGTCTGGGGAgcgca > 2:251278/1‑89 (MQ=37) tGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCAt > 8:20570/1‑91 (MQ=255) tGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCAt < 7:20570/91‑1 (MQ=255) tGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGt > 6:85566/1‑149 (MQ=255) tGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGt > 4:306590/1‑149 (MQ=255) gTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGc < 3:258731/92‑1 (MQ=255) gTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGc > 4:258731/1‑92 (MQ=255) tACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCcga < 7:132883/104‑1 (MQ=255) tACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCcga > 8:132883/1‑104 (MQ=255) tACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAAc < 7:93091/111‑1 (MQ=255) tACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGa < 4:65574/149‑1 (MQ=255) cTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGaaa < 8:211257/149‑1 (MQ=255) cTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGaaa < 5:127683/149‑1 (MQ=255) tGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAAt > 8:307924/1‑149 (MQ=255) tCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCgctgct > 1:333083/1‑115 (MQ=255) cGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTcgccg < 5:70757/149‑1 (MQ=255) cGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTcgcc < 7:140083/148‑1 (MQ=255) gCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACgaga < 3:240285/99‑1 (MQ=255) aGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCa > 4:89568/1‑124 (MQ=255) aaGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCcgac < 8:280170/89‑1 (MQ=255) aaGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTAcccc > 3:164894/1‑149 (MQ=255) gCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTAcccggc > 8:177407/1‑146 (MQ=255) ccGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGc > 8:218902/1‑149 (MQ=255) gACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGCCAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGcc > 6:151403/1‑148 (MQ=255) gACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTACCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCctt > 6:175651/1‑110 (MQ=255) gACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTACCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCctt < 5:175651/110‑1 (MQ=255) aaTCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGaaa > 6:165549/1‑125 (MQ=255) aaTCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGaaa < 5:165549/125‑1 (MQ=255) aaTCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGc > 8:88021/1‑148 (MQ=255) aTCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCt > 3:141350/1‑149 (MQ=255) tCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGAt < 6:206140/98‑1 (MQ=255) tCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGAt > 5:206140/1‑98 (MQ=255) tCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTcgcc < 7:324744/129‑1 (MQ=255) tCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTc > 5:212983/1‑149 (MQ=255) gCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGa < 8:44866/149‑1 (MQ=255) ctctGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGTGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGAt < 4:324096/149‑1 (MQ=255) tctGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGAAGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGAtg > 4:264473/1‑149 (MQ=255) gAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGAtgctgc > 1:40259/1‑149 (MQ=255) gAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGAtgctgc > 3:76952/1‑149 (MQ=255) gAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGAtgctg < 8:106919/148‑1 (MQ=255) aaCACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGAtgctgc > 7:112225/1‑148 (MQ=255) aaCACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGcc < 2:18503/149‑1 (MQ=255) acacGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGAtgctgc > 4:79741/1‑147 (MQ=255) acGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGc < 4:164894/149‑1 (MQ=255) cccGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTc < 2:40259/149‑1 (MQ=255) cccGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTc < 4:76952/149‑1 (MQ=255) cGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCaa < 7:124235/149‑1 (MQ=255) ggCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAg < 5:85566/149‑1 (MQ=255) gcgcCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGc < 7:307924/148‑1 (MQ=255) gcgcCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCCACCCCGGCCGAAGCCTCGATGCTGCCa < 4:176113/135‑1 (MQ=255) gcCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGTCTCGATGCTGCCAGCGTCAAGGACGCCGa > 4:117114/1‑149 (MQ=255) ccTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAg > 3:332180/1‑133 (MQ=255) acacTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATc > 5:93708/1‑149 (MQ=255) cacTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATcc < 8:112225/149‑1 (MQ=255) cacTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATc < 7:218902/148‑1 (MQ=255) tGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCctgc > 7:256052/1‑149 (MQ=255) cgcTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCctgctg < 6:284824/149‑1 (MQ=255) cccAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCg > 8:272649/1‑133 (MQ=255) cccAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCg < 7:272649/133‑1 (MQ=255) cccAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCCTGCTGGTgcg > 7:249278/1‑149 (MQ=255) ccAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCaa > 6:28977/1‑124 (MQ=255) ccAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCaa < 5:28977/124‑1 (MQ=255) cAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCCTGCTGGTGCGCt > 7:166896/1‑149 (MQ=255) | CCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAGCGCCATGCTGATAGTTGCCGACGAGAACATCCCGCTGCTCGATGCCTTCTTCCAGGGTTTCGGTGAAATTCGCCGCTACCCCGGCCGAAGCCTCGATGCTGCCAGCGTCAAGGACGCCGATATCCTGCTGGTGCGCT > NC_002947/2415162‑2415457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |