| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,445,684 | T→C | 6.2% | intergenic (‑173/‑43) | lexA‑I ← / → PP_2144 | transcriptional repressor/TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,445,684 | 0 | T | C | 6.2% | 286.6 / 6.1 | 97 | intergenic (‑173/‑43) | lexA‑I/PP_2144 | transcriptional repressor/TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (48/43); new base C (3/3); total (51/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
AGTGACTGGAATTATATACAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGCTGATTACCAGC > NC_002947/2445536‑2445825 | aGTGACTGGAATTATATACAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTAt > 3:307021/1‑149 (MQ=255)aGTGACTGGAATTATATACAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTAt < 2:209663/149‑1 (MQ=255) gTGACTGGAATTATATACAGTACTGGGTGCGCTGCAAGGCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATg < 7:186832/149‑1 (MQ=255) aCTGGAATTATATACAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGttt > 1:149523/1‑149 (MQ=255) aCTGGAATTATATACAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGttt > 4:159222/1‑149 (MQ=255) gAATTATATACAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACATACGTTTCag < 7:251124/148‑2 (MQ=255) aTTATATACAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACATACGTTTCag < 5:228625/146‑2 (MQ=255) aTTATATACAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACATACGTTTCag > 6:228625/1‑145 (MQ=255) ttATATACAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAacac < 3:159222/149‑1 (MQ=255) taCAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGtt > 7:218867/1‑149 (MQ=255) taCAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGtt > 2:178749/1‑149 (MQ=255) taCAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGt < 8:241482/148‑1 (MQ=255) aCAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGCCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATCTTTCAAACACCTGttt > 1:137940/1‑149 (MQ=255) aGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGt < 3:186975/149‑1 (MQ=255) aGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGt > 2:287161/1‑149 (MQ=255) aGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGt > 4:229995/1‑149 (MQ=255) tACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCt < 4:307021/149‑1 (MQ=255) tACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCt < 1:287161/149‑1 (MQ=255) cTGGGTGCGCTTCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCTGCTGGCGATTTTAAATGGCGACCTCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGATACGTATGTTTCAAACACCTGTTTGTCTGa < 6:31400/149‑1 (MQ=255) cTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTc > 3:191827/1‑146 (MQ=255) cTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTc < 4:191827/146‑1 (MQ=255) ggTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcg < 1:239013/148‑1 (MQ=255) gTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcgga < 7:331911/149‑1 (MQ=255) gTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcgga > 5:67556/1‑149 (MQ=255) tGCGCTGCAAGCCAAAAGGCGCAATAAAGAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTAt > 1:196116/1‑121 (MQ=255) tGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTAt < 2:196116/121‑1 (MQ=255) gcTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtag > 7:27524/1‑149 (MQ=255) cTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAAAACCTGTTTGTCTGAcgga > 6:254224/1‑144 (MQ=255) cTGCAAGCCAAAAGGAGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTATATGGAGACCGCCCAGTCACCGATCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTATGAcgta < 5:254224/144‑3 (MQ=255) cAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcg < 7:137025/148‑1 (MQ=255) ccAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcggagta < 8:218867/149‑1 (MQ=255) cAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcggagtag > 5:284/1‑149 (MQ=255) aaaaGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcggagtatt > 1:297120/1‑147 (MQ=255) aaaaGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcggagtagt > 7:319563/1‑149 (MQ=255) aaaaGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGATGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcggagtag > 4:27382/1‑148 (MQ=255) aaGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCaa > 2:91286/1‑113 (MQ=255) aaGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCa < 6:67556/149‑1 (MQ=255) cgcAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGc > 1:65739/1‑149 (MQ=255) gcAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGcc > 5:119618/1‑149 (MQ=255) aaaCAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATc > 2:223/1‑149 (MQ=255) aaCAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATc < 8:299081/148‑1 (MQ=255) aaCAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATc > 7:299081/1‑148 (MQ=255) ccgatctggTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGa < 1:165548/142‑1 (MQ=255) agaagaGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGaa < 2:65739/149‑1 (MQ=255) agaagaGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGa > 2:235140/1‑148 (MQ=255) ggTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGtt < 6:284/149‑1 (MQ=255) gTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGtt < 8:319563/148‑1 (MQ=255) gTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGACAAATCGGa > 2:165548/1‑141 (MQ=255) gcgcTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcg < 4:10128/116‑1 (MQ=255) gcgcTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcg > 3:10128/1‑116 (MQ=255) ttGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGcc > 1:334716/1‑126 (MQ=255) ttGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGcc < 2:334716/126‑1 (MQ=255) gCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCAtt < 1:178749/148‑1 (MQ=255) gCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATtc > 2:208028/1‑149 (MQ=255) aGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACggagtagtcggagtagtc > 4:58456/1‑116 (MQ=255) aGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACggagtagtcggagtagtc < 3:58456/116‑1 (MQ=255) ggCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGAc < 2:149523/148‑1 (MQ=255) gCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCAt < 4:80804/113‑1 (MQ=255) gCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCAt > 3:80804/1‑113 (MQ=255) gCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGc > 4:154624/1‑149 (MQ=255) ggttGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAAc < 6:225861/130‑1 (MQ=255) ggttGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAAc > 5:225861/4‑133 (MQ=255) ggCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGc > 3:29469/1‑149 (MQ=255) tGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcggagta > 7:329798/1‑102 (MQ=255) tGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcggagta < 8:329798/102‑1 (MQ=255) gcgcTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGagc < 2:297120/149‑1 (MQ=255) cTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGagcagc > 3:311769/1‑149 (MQ=255) ttAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAAt < 6:79407/107‑1 (MQ=255) ttAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAAt > 5:79407/1‑107 (MQ=255) ttAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCt < 4:29469/147‑1 (MQ=255) ttAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGt > 3:206695/1‑149 (MQ=255) aaaTGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGtt < 3:229995/148‑1 (MQ=255) tcggCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTcgc > 4:148124/3‑149 (MQ=255) aTGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTcgc < 4:311769/149‑1 (MQ=255) aTGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTcgc > 6:93533/1‑149 (MQ=255) tGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTcgcg > 6:169145/1‑149 (MQ=255) ccGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAgg < 3:154624/149‑1 (MQ=255) ccAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcggagta < 3:46843/79‑1 (MQ=255) ccAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAcggagtagtcggagta > 4:46843/1‑79 (MQ=255) aGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGAGGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTc < 6:119618/149‑1 (MQ=255) ttGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAggggg < 4:184503/134‑1 (MQ=255) ttGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAggggg > 3:184503/1‑134 (MQ=255) ttGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCg > 7:182418/1‑149 (MQ=255) ttGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGACATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCg > 7:100519/1‑149 (MQ=255) cAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGc < 1:223/149‑1 (MQ=255) aGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCg > 6:67695/1‑149 (MQ=255) aaGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGc > 8:254515/1‑149 (MQ=255) aGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGCt < 4:206695/149‑1 (MQ=255) gCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGa < 4:213993/94‑1 (MQ=255) gggCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGCTGAtt < 5:67695/149‑1 (MQ=255) gtttGAAACATACGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGCTGATTa > 3:49349/4‑149 (MQ=255) tttGAAACATACGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGCTGa < 5:160783/143‑1 (MQ=255) tttGAAACATACGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGCTGa > 6:160783/3‑145 (MQ=255) gCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGc < 5:113340/139‑1 (MQ=255) gCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGc > 6:113340/1‑139 (MQ=255) gCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGCTGATTAc < 8:100519/149‑1 (MQ=255) tGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGCTGATTAc > 3:8241/1‑147 (MQ=255) tGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGCTGATTACCa > 8:155109/1‑149 (MQ=255) aaaCGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGCTGATTACCa < 5:169145/147‑1 (MQ=255) aCGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCAAATCGGAAACAGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGTCTGATTACCAGc > 4:262598/1‑147 (MQ=255) | AGTGACTGGAATTATATACAGTACTGGGTGCGCTGCAAGCCAAAAGGCGCAATAAACAGAAGAGGTGGCGCTTGCAGTGGGCCGGCTGGCGCTTTTAAATGGCGACCGCCCAGTCACCGAGCCTTGACAGAAGCAGGGCTGAAACGTATGTTTCAAACACCTGTTTGTCTGACGGAGTAGTCGGAGTAGTCATGGCCCAATCGGAAACCGTTGAACGCATTCTCGACGCTGCCGAGCAGCTGTTCGCGGAAAGGGGGTTCGCCGAAACCTCGTTGCGGCTGATTACCAGC > NC_002947/2445536‑2445825 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |