| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,454,982 | G→A | 7.2% | A46V (GCC→GTC) | mfd ← | transcription‑repair coupling factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,454,982 | 0 | G | A | 7.2% | 289.5 / 6.8 | 96 | A46V (GCC→GTC) | mfd | transcription‑repair coupling factor |
| Reads supporting (aligned to +/- strand): ref base G (41/48); new base A (4/3); total (45/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.81e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
GCGATGCGCTGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGAACTGACACGGGAGATTGCAC > NC_002947/2454841‑2455130 | gCGATGCGCTGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTcag < 3:335313/149‑1 (MQ=255)gCGATGCGCTGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTca < 4:48500/148‑1 (MQ=255)gCGATGCGCTGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTGTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGCGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTc < 2:263271/147‑1 (MQ=255) gATGCGCTGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTcagca < 7:30625/149‑1 (MQ=255) ggtGGGTGATGATGTCCTGTTGCGGCGAGAACAGGTCGTAGGGGAGGTTTTCGCAATCGGGGTACGGCAGCACGGGCAGTTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAgg < 4:42436/147‑1 (MQ=255) gcTGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAgg < 2:76687/149‑1 (MQ=255) cTGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTc < 5:72886/139‑1 (MQ=255) cTGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTc > 6:72886/1‑139 (MQ=255) tGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAgg < 3:338841/147‑1 (MQ=255) tGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAgg > 4:338841/1‑147 (MQ=255) tGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGt > 1:138524/1‑149 (MQ=255) gggAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGt > 1:312463/1‑148 (MQ=255) ggAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTg < 6:108751/148‑1 (MQ=255) agaTGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAg < 3:256388/149‑1 (MQ=255) agaTGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAg < 7:233508/149‑1 (MQ=255) gatgatGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGaa > 6:33127/1‑147 (MQ=255) gatgatGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGaa < 5:33127/147‑1 (MQ=255) gatgTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTcagca < 7:307201/134‑1 (MQ=255) gatgTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTcagca > 8:307201/1‑134 (MQ=255) gatgTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGc > 7:299207/1‑149 (MQ=255) gTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAg > 5:37083/1‑149 (MQ=255) tCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAgc < 4:49279/149‑1 (MQ=255) gTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGTGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCgctgc > 7:6754/1‑149 (MQ=255) cgAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTcag > 2:326413/1‑117 (MQ=255) cgAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTcag < 1:326413/117‑1 (MQ=255) gagaACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTggcggc > 3:65364/1‑149 (MQ=255) gagaACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCCGCCAGCAGCGCTggccgc < 8:100046/149‑1 (MQ=255) aCAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTcag < 2:34626/112‑1 (MQ=255) aCAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTcag > 1:34626/1‑112 (MQ=255) aCAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCg > 1:125554/1‑149 (MQ=255) aCAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGACTTCg < 2:312463/149‑1 (MQ=255) cAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCgg < 4:229350/149‑1 (MQ=255) tCGTAGGGCAGGGTTTCCCAATCGGTGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGAt < 8:6754/149‑1 (MQ=255) cGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATg < 1:329631/149‑1 (MQ=255) gggCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCCGCCAGCAGCGCTggccgc > 2:115742/1‑135 (MQ=255) gggCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCCGCCAGCAGCGCTggccgc < 1:115742/135‑1 (MQ=255) ggCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCgctgc < 1:35115/127‑1 (MQ=255) ggCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCgctgc > 2:35115/1‑127 (MQ=255) gCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCg < 4:246194/115‑1 (MQ=255) ggTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGa < 2:38325/149‑1 (MQ=255) ggTGTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGa < 6:232790/149‑1 (MQ=255) gTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTggc > 4:196056/1‑125 (MQ=255) gTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTggc < 3:196056/125‑1 (MQ=255) cccAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATg < 4:202998/134‑1 (MQ=255) cccAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATg > 3:202998/1‑134 (MQ=255) cccAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGggc < 6:37083/148‑1 (MQ=255) ccAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGggcgg < 4:285103/149‑1 (MQ=255) ccAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGCTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGggcgg > 8:3936/1‑149 (MQ=255) aaTCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATgg > 8:306191/1‑132 (MQ=255) aaTCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATgg < 7:306191/132‑1 (MQ=255) ggggAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCg < 8:299207/148‑1 (MQ=255) gggAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCggg > 3:320122/1‑149 (MQ=255) ggAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCggg > 5:230046/1‑148 (MQ=255) gcagcaCGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCgg > 6:72738/1‑141 (MQ=255) gcagcaCGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCgg < 5:72738/141‑1 (MQ=255) cagcaCGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGc > 5:245196/1‑149 (MQ=255) agcaCGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGcc < 2:125554/149‑1 (MQ=255) caCGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGccc > 1:151573/1‑148 (MQ=255) cAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGgttt < 6:245196/149‑1 (MQ=255) cAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGgttt < 1:260542/149‑1 (MQ=255) aGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGgtttg < 6:230046/149‑1 (MQ=255) gTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGgtttgtt > 7:89176/1‑149 (MQ=255) gTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGgtttgtt < 4:320122/149‑1 (MQ=255) tGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTgc > 6:115727/1‑149 (MQ=255) gggCAAAGAAGCCCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCTGCACCGGGCAGGTTGCCCCAGGtttgtttg < 4:65364/146‑1 (MQ=255) gCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTgccggc > 3:156354/1‑149 (MQ=255) gCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTgccggc > 2:88002/1‑149 (MQ=255) aagaagCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGCGGGCGGCACCGGGCAGGTTGCCCCAGGTGTGTTTGACGTCCG‑t > 4:267875/1‑149 (MQ=255) agaagCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCAG‑Tg > 8:314153/1‑149 (MQ=255) cgcgcAGCTCCTGCTGCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGcc < 4:21257/148‑1 (MQ=255) agCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGcc > 8:58261/1‑149 (MQ=255) cAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACa < 8:89176/149‑1 (MQ=255) cTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTgccg > 2:292359/1‑133 (MQ=255) cTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTgccg < 1:292359/133‑1 (MQ=255) tCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTg > 7:99931/1‑93 (MQ=255) tCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTg > 8:55954/1‑149 (MQ=255) cccTGCTGCTGACGGCCGACAGCCAGGCCGCCGACCGTCTGGAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTg > 6:71013/2‑149 (MQ=25) cccTGCTGCTGACGGCCGACAGCCAGGCCGCCGACCGTCTGGAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTg > 6:335939/2‑149 (MQ=25) ccTGCTGCTGACGGCCGACAGCCAGGCCGCCGACCGTCTGGAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGc > 3:54745/1‑149 (MQ=37) ccTGCTGCTGACGGCCGACAGCCAGGCCGCCGACCGTCTGGAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGc > 6:71628/1‑149 (MQ=37) ctgctgctgACGGCCGACAGCCAGGCCGCCGACCGTCTGGAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCg < 5:71628/149‑1 (MQ=37) cTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAACCGCCAGCAGCGCTggc < 5:75877/66‑1 (MQ=255) cTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAACCGCCAGCAGCGCTggc > 6:75877/1‑66 (MQ=255) cTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGACAGCAGCAGGGTGAAGCCGCCAGCGCTCCTGGCGGCTTCGGCCATGGCAAGCCTGAGGGCCCCACCTGGCAGGTTGCCCCAGCTTAGTTTGCCGGCCC‑TGTCCGACATTAGCCGTa > 7:302447/1‑149 (MQ=255) tCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTCGCGGTAg > 6:319079/1‑149 (MQ=255) ctgACGGCCGACAGCCAGGCCGCCGACCGTCTGGAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGgc < 4:54745/147‑1 (MQ=38) cAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGgc < 7:58261/149‑1 (MQ=255) gTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTCGCGGTAGGCGCAGaa < 5:319079/149‑1 (MQ=255) ccgacagcCAGGCCGCCGACCGTCTGGAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGAAc < 5:335939/143‑1 (MQ=255) cggcggCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGAACt < 5:115727/149‑1 (MQ=255) tGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGAACTGACACgg > 2:72280/1‑148 (MQ=255) gCTGTCGGCCGTCAGCACCACGCTGAAGCGGCCAGCGCTGCTGGCGGCTACGGCGATGGCAAGGCTGAGGGCGGCACCCGGCAGGTTGCCCCACGTTTGTTTGCCGCCCG‑TGGCCGACATTTGCGGTAGCCGCAGAACTGACACgg > 4:321893/1‑146 (MQ=255) tGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGA‑GGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGAACTGACACGGGAGAtt > 4:303931/1‑149 (MQ=255) gTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGAACTGACACGGGAGAtt > 4:40361/1‑149 (MQ=255) tCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGAACTGACACGGGAGATTg < 7:55954/149‑1 (MQ=255) ggCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCGATGGCCGACATTTGCGGTAGGCGCAGaa < 1:9887/132‑1 (MQ=255) ggCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGaa > 2:9887/1‑131 (MQ=255) ggCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGAACTGACACGGGAGATTGc < 3:267875/148‑1 (MQ=255) ggCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGAACTGACACGGGAGATTGCa < 2:151573/149‑1 (MQ=255) gCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGAACTGACACGGGAGATTGccc > 8:259752/1‑147 (MQ=255) | GCGATGCGCTGGGAGATGATGTCCTGGTGCGGCGAGAACAGGTCGTAGGGCAGGGTTTCCCAATCGGGGAACGGCAGCACGGGCAGGTCTGGGGCAAAGAAGCGCAGCTCCTGCTCCAGACGGTCGGCGGCCTGGCTGTCGGCCGTCAGCAGCAGGGTGAAGCGGCCAGCGCTGCTGGCGGCTTCGGCGATGGCAAGGCTGAGGGCGGCACCGGGCAGGTTGCCCCAGGTTTGTTTGCCGGCCG‑TGGCCGACATTTGCGGTAGGCGCAGAACTGACACGGGAGATTGCAC > NC_002947/2454841‑2455130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |