| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,456,871 | C→T | 6.6% | intergenic (+122/‑59) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,456,871 | 0 | C | T | 6.6% | 223.0 / 3.9 | 77 | intergenic (+122/‑59) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (37/34); new base T (3/2); total (41/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.76e-01 | |||||||||||
TGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGC > NC_002947/2456724‑2457019 | tgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGccc < 8:306672/149‑1 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAATGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTa < 7:34797/149‑1 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTg > 2:213838/1‑147 (MQ=255) cGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAg < 4:294121/149‑1 (MQ=255) gTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGGGCAG‑CGATAATCCTGTAGGAGCgg < 4:188059/148‑1 (MQ=37) gTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGGGCAG‑CGATAATCCTGTAGGAGCgg > 3:188059/1‑148 (MQ=37) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTAcc < 4:42629/149‑1 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTTcc > 7:258941/1‑149 (MQ=255) gATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCgg < 1:154487/137‑1 (MQ=255) gATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCgg > 2:154487/1‑137 (MQ=255) ttCGCTTGTAAGGCAATGAAAAACCGGCAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGaa < 7:319158/148‑1 (MQ=255) ttCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCCCTACTA‑CAGGATTAT‑AGCTGCCCCTGTAGGAGCGGGTTTACCcgcg > 8:319158/1‑146 (MQ=255) tCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTGTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTTT‑GGCTGCCCCGGTAGGAGCGGGTTTTCCCGCGaa > 1:276806/1‑147 (MQ=38) ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CCGGATTAT‑CGCTGACCCTGTAGGAGCGGGTTTTCCCGCGAAGGGGc > 8:325942/1‑148 (MQ=255) ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGaa < 5:151730/143‑1 (MQ=255) ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGaa > 6:151730/1‑143 (MQ=255) gTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCa < 2:261981/148‑1 (MQ=255) aGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTATCCGCTGCCCCTGTAGGAGCGGGTTTACCcgcg < 1:212791/137‑1 (MQ=255) aGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑AAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCcgcg > 2:212791/1‑136 (MQ=255) ggCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTTT‑CGGTGCCCCGGTTGGGGCGGGTTTTCCCGCGAAGAGGCCAGGAcc > 3:93264/1‑149 (MQ=38) aaTGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCgg > 1:15818/1‑148 (MQ=255) aTGAAAACCCGGTACCCTTGGGGTTCCCGTTTTTTTTTTTTCTTTATGTGTGTTGGCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CCGCATTCT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGc < 6:142816/138‑1 (MQ=25) aTGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTACTA‑CAGGAATAT‑AGCTGCCACTGTAGGGGCGGGTTTAACCGGGAAGAGGCCatatccg > 5:142816/1‑140 (MQ=38) aTGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCGCCTA‑CAGGATTAT‑CGCTGGCCCGGTAGGAGCGGGTTTTGCCGCGAAGAGGCCAGCCCCGGc > 3:104637/1‑148 (MQ=38) aaaCGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTTAAAACGCTCCTA‑GAGGATTAT‑AGGTGCCCCTGTAGGAGCCGGTTTACCCCCCCAGAGGCCAGCACCGGCAAcc > 5:99770/1‑146 (MQ=38) aaCGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACCAGGGGCAG‑CGATAATCCTGTAGGAGCggg < 1:26119/115‑1 (MQ=21) aaCGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGGGCAG‑CGATAATCCTGTAGGAGCggg > 2:26119/1‑114 (MQ=21) ggAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAcc > 2:91108/1‑149 (MQ=255) aCCTTGGGGTTCCGGTTTTTTTTTATTCTGATTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa < 8:258941/149‑1 (MQ=255) aCCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa < 7:325942/149‑1 (MQ=255) gggTTCCGTTTTTTTTTTATTCTTAATGTGGGTTGCCAGTGCCGGCCCTTTCGGGGGTAACCCCGCTCCTA‑CAGCATTTT‑CGATCCCCCTGTTGTTGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTgc < 6:99770/149‑1 (MQ=25) ggTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTgcg < 2:15818/149‑1 (MQ=255) ccGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCACCTA‑AAGGATTAT‑CGCTGCCCCTGTTGGAGCGGGTTTTCCCGCGAAGAGGCCCGCACCGGCAACCGCGAAACCAAAAAGTGCGCCCAg > 6:140707/1‑149 (MQ=37) gTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCTA‑AAGGATTAT‑AGCTGCCCCTGTAGGAGCGGGTTTAACCGCGAAGAGGCCAGCACCGGCCACCGAGAAACCCTACTGTGCGCACAGcc > 3:318659/1‑149 (MQ=39) gTTTTTTTTTATTCTCAATGGGTGTGGTCCGTGCCGCCCCTTTCGCGGGAAACCCCGCCCCTA‑CCGGATTAT‑CGCTCCCCCTGTCGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGcc < 4:93264/149‑1 (MQ=37) ttttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCTACCGAGAAACCCTACTGTGCGCACAGCCCTa < 1:213838/148‑1 (MQ=255) tatATTCTTAATGTGTGTTGTCTGGGCGGGCCCTTTCGCGGTTAAACCCGCTCATA‑CAGGATTAT‑CGCTGCCCCTTTAGGAGGGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGt < 1:309074/147‑1 (MQ=255) gAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCGCCGGTAGGAGCGGGGTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctg > 7:224047/1‑149 (MQ=255) aaTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTTTTGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACCCCCCAACTGTTCATTctgc > 2:80400/1‑149 (MQ=38) aaTGTGTGTTGTCAGTGCCGGCCCTTTCGCAGGTAAACCCCCACCTA‑CAGGATTAT‑AGCTGCCCCAGTAGGAGCCGGTTTAACCGCGAAGAGGCCCGCACCGGCAACCCACAAACCCAACAGTGCGCACCGCCCGACAGTTCATTctgc > 4:168010/1‑149 (MQ=255) ttttgtgtTGTATGTGCCGGCCCTTTCGCGTGTAACCCCTCTCCTA‑CATTATTAT‑CGCTGCCCCTGTAGGAGCGGTTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTctgc < 5:213099/145‑1 (MQ=38) gtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTAc < 5:213896/77‑1 (MQ=255) gtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTAc > 6:213896/1‑77 (MQ=255) ttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCTA‑CAGGATTAT‑AGCTGCCCCTGTAGGAGCCGGTTTACCCGCGAAGAGGCCAGCACCCGCAACCGAGAAACCCTACAGTGCGCACAGCCCTACAGTTCATTATGCTGCTACt > 2:73039/1‑148 (MQ=38) ccgTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCg < 4:318659/147‑1 (MQ=255) gTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCAACTCTGCGCACAGCCCAACTGTTCATTCTGCTGCTACTAACCGc > 8:271611/1‑148 (MQ=255) tGCCGGCCCTTTCGCGGGTAAACCGGCTCCTA‑CTGGATTAT‑CGCTGCCCCTGTAGGAGGGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCt < 7:271611/149‑1 (MQ=255) ggCCCTTTCGCGGGTAAAACCCCTACAA‑CAGGATTAT‑ACCATCCCCAGTAGGAACCGGTTTAACCCCCAACAGGCCACCACCGGCAACCCACAAACCCAACAGTGCGCACACCCCAAAAGTTCATTATGATGGTACTCACCGCCAGCaa > 6:189237/1‑149 (MQ=255) gCCATTTCGCGGTTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAc < 7:27727/149‑1 (MQ=255) gcgGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACt < 4:127269/110‑1 (MQ=255) gcgGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACt > 3:127269/1‑110 (MQ=255) gcgGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGccc > 4:294619/1‑149 (MQ=255) aaaCCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCga > 6:204892/1‑76 (MQ=255) aaaCCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCga < 5:204892/76‑1 (MQ=255) aaCCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTg > 7:135918/1‑149 (MQ=255) ccGCTCCTA‑CAGGGGCAG‑CGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAg > 5:258136/1‑149 (MQ=37) ccGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTg > 6:264374/1‑146 (MQ=255) ccGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTg < 5:264374/146‑1 (MQ=255) a‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 7:38934/1‑149 (MQ=255) a‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 8:142231/1‑149 (MQ=255) a‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg > 2:159448/1‑149 (MQ=255) cAGGATTTA‑CGCTGCCCCTGTAGGAGCTGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTgg < 5:189237/147‑1 (MQ=255) cAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa < 8:228471/125‑1 (MQ=255) cAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCaa > 7:228471/1‑125 (MQ=255) cAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTggg < 8:38934/148‑1 (MQ=255) aGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGcccc < 6:302229/130‑1 (MQ=255) aGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGcccc > 5:302229/1‑130 (MQ=255) ggATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtgg < 1:91108/149‑1 (MQ=255) gATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa > 5:20812/1‑136 (MQ=255) gATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGa < 6:20812/136‑1 (MQ=255) gATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtg > 6:288463/1‑147 (MQ=255) gATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCAGGCGCTCCAGggtg < 5:288463/147‑1 (MQ=255) gATTAT‑CGCTGCCCCTGTAGGAGCGGGCTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGggtggt < 3:294619/149‑1 (MQ=255) aT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGa > 4:38520/1‑149 (MQ=255) t‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAc < 8:135918/149‑1 (MQ=255) t‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGAc > 8:246213/1‑149 (MQ=255) cTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa > 8:17110/1‑61 (MQ=255) cTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTa < 7:17110/61‑1 (MQ=255) ccccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATggg < 3:38520/149‑1 (MQ=255) ccccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATggg < 1:159448/149‑1 (MQ=255) ccccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATggg > 6:87516/1‑149 (MQ=255) ccccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTACAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATg < 5:140707/147‑1 (MQ=255) cccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGgc < 5:87516/149‑1 (MQ=255) | TGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTA‑CAGGATTAT‑CGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGC > NC_002947/2456724‑2457019 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |