| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,474,148 | T→C | 12.6% | intergenic (‑53/+127) | PP_2167 ← / ← tal | PhoD‑like phosphatase/transaldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,474,148 | 0 | T | C | 12.6% | 177.7 / 15.6 | 77 | intergenic (‑53/+127) | PP_2167/tal | PhoD‑like phosphatase/transaldolase |
| Reads supporting (aligned to +/- strand): ref base T (28/36); new base C (4/5); total (35/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.86e-01 | |||||||||||
TTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTAT > NC_002947/2474000‑2474292 | ttGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑GGGGCAAGCCCGCCCTTACAt < 4:91346/149‑1 (MQ=255) gTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGAt < 8:105403/149‑1 (MQ=255) tAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATc < 3:296127/149‑1 (MQ=255) gTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCa < 3:103395/148‑1 (MQ=255) gACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAgtg > 7:207833/1‑149 (MQ=255) aCGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCTCCTACACTGATcgatg > 7:249514/1‑144 (MQ=39) gAGCCAGACGGCCAGCCGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGCCAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCCAGCCCGCGCGGACATGGATCAGTGTAg > 3:240959/1‑149 (MQ=255) agacggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCg < 4:223844/149‑1 (MQ=37) cggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCTCCTACACTGATCGATGTAAgggcgggc < 8:249514/149‑1 (MQ=37) cggccagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCTCCTACACTGATCGATGTAAgggcgggc < 5:125805/149‑1 (MQ=37) cagacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGc < 4:312189/149‑1 (MQ=37) gacgCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGccc < 8:207833/149‑1 (MQ=255) gtGGGGTTGCAGGCGGCGCAGTACGGGGCCGGCTATAACGTGGGGCAAGGGGTTTGGGTAGGTCATGGAAAGTTCGGGTGGCTATGGCGGCCTGTTCG‑CGGTCAAGCCCGCCCTTACATCGATCAGTGTAGTAGCGGGGTTGCCCGCGa < 4:296616/148‑1 (MQ=255) cTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGa < 6:267808/149‑1 (MQ=255) cTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCAAGCCcgctc < 2:72414/149‑3 (MQ=255) cTGGGGTTCCAGGCGGCGCAGTACCGGGCAGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATAGATCCGGGTAGGAGCGGGCTTGGAcgcg > 6:361400/1‑148 (MQ=255) ggTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCt > 8:302572/1‑136 (MQ=255) ggTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCt < 7:302572/136‑1 (MQ=255) gTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAgg < 2:110902/149‑1 (MQ=255) ttCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGc > 8:165717/1‑137 (MQ=255) ttCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGc < 7:165717/137‑1 (MQ=255) ccAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCtt > 3:209053/1‑133 (MQ=25) ccAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCtt < 4:209053/133‑1 (MQ=25) ccAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCAGTTAG‑CGGGCAAGCCCGCCCTTAGAAAGAAAAATGGATGAGCGGGCGTGCCCGCGCACAGGccc > 8:64421/1‑149 (MQ=255) cAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTGGCCCGCGAACAGGCCCGAG‑AATTCaa < 5:9289/149‑1 (MQ=255) gTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATa < 3:286698/149‑1 (MQ=255) ccGGGCCGGCGAGAACGAGGGTCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGc < 7:7589/116‑1 (MQ=255) ccGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGc > 8:7589/1‑116 (MQ=255) ccGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATacac < 7:132406/149‑1 (MQ=255) gCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCAGTTAC‑CGGGCAACCCCGCCCATAAAAAGATAAGTGTATGAGCGGGCTTTCCCGCCCACAGGGCCCAG‑AAATAAATACCCAAc > 6:71623/1‑148 (MQ=255) cGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCtt > 8:46482/1‑109 (MQ=255) cGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCtt < 7:46482/109‑1 (MQ=255) aGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGTCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGcaaa < 7:64421/149‑1 (MQ=255) gggCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTTTTAG‑CCGGCAAACCCGCCCTTACATAGATAAGTGTATGAGCGGGCATTCCCCCGAACACGCCCCAG‑AATTCAAAAAAAAAA‑TAAGGCGTTGcaaaa > 2:25770/1‑147 (MQ=255) gggCAACGGGTTAGGGGAGGTCATCGACAGCGCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAGCAATTCAATACACAAC‑TAAGGCGTGGcaaa < 1:25770/148‑1 (MQ=255) ggTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGC < 5:71623‑M1/149‑1 (MQ=255) ttAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTgg < 3:227165/133‑1 (MQ=255) gggAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCATACATCGATCAGTGTAGGAGCGGGCTTGACCGCGAACAGGCCCGAG‑AAATCAATACACAAC‑TAATGCGGGGCAAACAAAACGGGCGGaaa > 8:262397/1‑148 (MQ=39) gAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCga < 6:259321/101‑1 (MQ=255) gAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTAG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCga > 5:259321/1‑101 (MQ=255) aTCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGgaagtgttcag > 1:49506‑M1/1‑137 (MQ=255) aTCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGaa < 7:192499/148‑1 (MQ=255) aTCGACAGCTCGGGTGGCTATGGCGGCCTGTTAG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AAATCAATAAACAAA‑AAAGGCGGGGCAAACAAAACGGGCGGAAAATACTGaa > 8:192499/1‑148 (MQ=38) aTCGACAGCTCGGGTGGCTATGGCGGCCTGTTAG‑CGGGCAAGCCCGCCCGTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑AAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGaa > 2:22578/1‑148 (MQ=255) aTCGACAGCTCGGGTGGCTATGGCGGCCTGATCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCTAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGaa < 5:361400/148‑1 (MQ=255) aTCCACAGCTCGGTGGGCTATGGCGGCCGGTCCG‑CGGCCAAGCCCGCCCTTAAAACGATCAGTGTCGCAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGaa < 3:168144/148‑1 (MQ=255) aGCTCGGGTGGCTATGGCGGCCAGTTAGCCGGGAAACCCCCCCCTTA‑AAAGATAAAGGTTTGAGCGGGCTTTGCCCCGGACACGCCCGCG‑AATTTAAAAAACAACAAAAGGGGGGGCAAAAAAAACGGCGGGAAAAAATTGAAAACtac > 8:28146/1‑147 (MQ=255) ggggggCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGaaaa < 3:181070/130‑1 (MQ=255) gTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCccgcccgt < 7:241362‑M2/149‑9 (MQ=255) tgccTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTc < 3:297246/146‑1 (MQ=255) gCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGgaagtgttcagtattttccgcccgttt < 2:49506‑M1/148‑28 (MQ=255) gCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAg < 8:241362/149‑1 (MQ=255) cgacctcggcCTGTTCG‑CGGGCAAGCCCTCCCTTACCTCGATCAGTGTAGGTGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAgg < 8:254750/143‑1 (MQ=39) tGGCGGCCTGTGCG‑CGGGCACCCCCGCCATAAAATCCCCCAGTGACGGCGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGgaagtgttcagtattttccgcccgttttgt < 5:51138‑M1/147‑31 (MQ=255) ggcCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGCG‑AAGTCCATACACAAC‑TAAGGCGTGGCATACAACACGGGCGGAAAATACTGAACACGTCCCGCCCGTCAgg > 7:254750/1‑142 (MQ=38) ccTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACg > 5:171195/1‑148 (MQ=255) cTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGaa < 7:262397/149‑1 (MQ=255) tGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAAc > 4:182966/1‑149 (MQ=255) g‑cgGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTa > 8:237969/1‑148 (MQ=255) gggCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTAt > 6:140494/1‑147 (MQ=255) gCAAGCCCGCTCCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAgg > 8:65274/1‑149 (MQ=37) aaGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTAt < 6:34899/143‑1 (MQ=255) aaGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTAt > 5:34899/1‑143 (MQ=255) aaGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGAGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCGCGCCCGTCAGGCAAACACGAACTGTATCAGccc < 4:240959/149‑1 (MQ=255) aGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCt > 8:28858/1‑149 (MQ=255) gcccgctcCTACACTGATCGATGTAAGGGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCtt > 1:230126/1‑149 (MQ=37) gcccgcccTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAaca > 4:228965/1‑131 (MQ=255) gcccgcccTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAaca < 3:228965/131‑1 (MQ=255) cgcccTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCtttt > 4:56083/1‑148 (MQ=255) cgcccTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTc < 3:56083/149‑1 (MQ=255) gcccTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCtttt > 3:279127/1‑147 (MQ=255) cTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGc > 6:177093/1‑148 (MQ=255) ttACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTa > 1:341334/1‑149 (MQ=255) aCATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGc < 4:101473/116‑1 (MQ=255) aCATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGc > 3:101473/1‑116 (MQ=255) aCATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTAt > 3:201072/1‑148 (MQ=255) aCATCGATCAGTGTAGGAGCGGACTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGgaagtgttcagtattttccgcccgtt > 4:266182‑M1/1‑86 (MQ=255) aCATCGATCAGTGTAGGAGCGGACTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGgaagtgttcagtattttccgcccgtt < 3:266182‑M1/112‑27 (MQ=255) | TTGGGTAGTGACGAGCCAGACGGCCAGACGCTGGGGTTCCAGGCGGCGCAGTACCGGGCCGGCGAGAACGAGGGGCAACGGGTTAGGGGAGGTCATCGACAGCTCGGGTGGCTATGGCGGCCTGTTCG‑CGGGCAAGCCCGCCCTTACATCGATCAGTGTAGGAGCGGGCTTGCCCGCGAACAGGCCCGAG‑AATTCAATACACAAC‑TAAGGCGTGGCAAACAAAACGGGCGGAAAATACTGAACACTTCCCGCCCGTCAGGCAAACACGAACTGTATCAGGCCTTTTCAGCTAT > NC_002947/2474000‑2474292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |