| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,493,696 | G→A | 5.7% | intergenic (+36/+78) | PP_2186 → / ← PP_2187 | formate dehydrogenase subunit delta/universal stress protein family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,493,696 | 0 | G | A | 5.7% | 272.7 / 3.4 | 87 | intergenic (+36/+78) | PP_2186/PP_2187 | formate dehydrogenase subunit delta/universal stress protein family protein |
| Reads supporting (aligned to +/- strand): ref base G (36/46); new base A (3/2); total (39/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
GCAGCATTTGCAGAGCTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCAC > NC_002947/2493549‑2493833 | gcagcaTTTGCAGAGCTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGc > 6:288021/1‑149 (MQ=255) cagcaTTTGCAGAGCTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGcc > 7:250523/1‑149 (MQ=255) agcaTTTGCAGAGCTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCg < 3:256600/149‑1 (MQ=255) agcaTGTGCAGAGCTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCg < 3:65781/149‑1 (MQ=255) aTTTGCAGAGCTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGc > 3:129698/1‑148 (MQ=255) aTTTGCAGAGCTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGc > 7:17047/1‑148 (MQ=255) gCAGAGCTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAAt < 5:52658/148‑1 (MQ=255) agagCTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAAtgtg < 8:17047/149‑1 (MQ=255) agCTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTgg < 8:250523/148‑1 (MQ=255) cTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGt < 2:46857/149‑1 (MQ=255) ttCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGtt > 7:200254/1‑149 (MQ=255) gACGCCGGCGATGCGTCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAAt > 7:72837/1‑149 (MQ=255) gACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAAt > 8:141802/1‑149 (MQ=255) tgCCGGCGCATCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTACCGGCGAATGTGGCGTTGAAATc > 4:233753/2‑148 (MQ=255) gCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCaa < 7:110122/149‑1 (MQ=255) ccGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAAt < 1:89602/149‑1 (MQ=255) ggCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGa < 5:66972/149‑1 (MQ=255) gATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGc < 7:285673/149‑1 (MQ=255) tGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCAt < 6:239656/149‑1 (MQ=255) gcCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTcg > 6:205262/1‑149 (MQ=255) ccGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTcgc > 4:334010/1‑149 (MQ=255) tctgCTGTCGGAATGGTGGGTGGCCCATGCGGGGTAGGTGATTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCATCGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTcgcg < 6:210881/144‑1 (MQ=255) cAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGt < 7:141802/149‑1 (MQ=255) cAGCTGGCGGAATGGAGCGAGGCCCATCCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTCGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTTGCGTGGAAATCAATGACGCATTCGCGGGt < 3:299961/149‑1 (MQ=255) cTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGCGGCTAGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGAGTTGAAATCAATGACGCAtaagcg > 5:210881/1‑138 (MQ=255) tGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCgg > 5:191075/1‑143 (MQ=255) tGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCgg < 6:191075/143‑1 (MQ=255) gCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAAc < 8:72837/147‑1 (MQ=255) ggAATGGTGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGc < 5:288021/149‑1 (MQ=255) ggAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGt < 1:203705/141‑1 (MQ=255) ggAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGt > 2:203705/1‑141 (MQ=255) gAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTa > 3:262182/1‑148 (MQ=255) gAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTCACCCGCGAATGCGTCATTGATTTCAACGCCACATTCGCCGGCAAAcc < 3:32048/140‑1 (MQ=21) gAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTCACCCGCGAATGCGTCATTGATTTCAACGCCACATTCGCCGGCAAAcc > 4:32048/1‑140 (MQ=21) gAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAgg < 7:16065/149‑1 (MQ=255) gCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGc > 2:276260/1‑149 (MQ=255) gCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGc < 1:276260/149‑1 (MQ=255) ccATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCt < 3:334010/149‑1 (MQ=255) ccATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCt < 8:162828/149‑1 (MQ=255) aTGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGc < 7:106187/149‑1 (MQ=255) cGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCata < 8:200254/149‑1 (MQ=255) cGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTACCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCat < 3:233753/148‑1 (MQ=255) gggAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTg > 1:304990/1‑149 (MQ=255) gAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGcc < 4:262182/149‑1 (MQ=255) gggCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCTATGACGCATTCGCGGGTGAACCCGCTCCTAc > 1:285054/1‑127 (MQ=255) gggCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTAc < 2:285054/127‑1 (MQ=255) cTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACt > 2:18127/1‑147 (MQ=255) ttGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTc > 5:215187/1‑103 (MQ=255) ttGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTc < 6:215187/103‑1 (MQ=255) ttGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAg > 5:294041/1‑149 (MQ=255) ttGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAg > 3:248173/1‑149 (MQ=255) cGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTa > 4:268941/1‑116 (MQ=255) cGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTa < 3:268941/116‑1 (MQ=255) cGAAGGTGCGGGAGGCGTTGGGCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGGGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCcgcg < 5:205262/148‑1 (MQ=255) aaGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGc > 3:130408/1‑149 (MQ=255) catctgtcGTTGGTATAGATTGCCGGGTGGCAACGGAAGCTTGGTGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAg < 6:246074/139‑1 (MQ=38) ggAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCg < 4:130408/149‑1 (MQ=255) gTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAgggg < 7:40710/107‑1 (MQ=255) gTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAgggg > 8:40710/1‑107 (MQ=255) gTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGt < 1:18127/149‑1 (MQ=255) gTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAAGGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAg > 5:246074/1‑138 (MQ=255) ggTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTgg < 4:248173/148‑1 (MQ=255) tAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGAt > 3:122117/1‑149 (MQ=255) aGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGc > 1:105643/1‑111 (MQ=255) aGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGc < 2:105643/111‑1 (MQ=255) gACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCat > 4:287749/1‑105 (MQ=255) gACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCat < 3:287749/105‑1 (MQ=255) gACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATgg > 4:330808/1‑149 (MQ=255) aCTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGc < 3:330808/149‑1 (MQ=255) tCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCtt > 8:244849/1‑149 (MQ=255) tCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCtt > 5:162515/1‑149 (MQ=255) ccGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTc < 6:162515/148‑1 (MQ=255) cGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGc < 2:36030/144‑1 (MQ=255) cGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGc > 1:36030/1‑144 (MQ=255) gcggcAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCAc < 6:294041/149‑1 (MQ=255) cAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCtt < 7:244849/149‑1 (MQ=255) aaCGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTg > 1:138031/1‑95 (MQ=255) aaCGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTg < 2:138031/95‑1 (MQ=255) ggAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGt > 4:79312/1‑123 (MQ=255) ggAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAg > 6:177703/1‑148 (MQ=255) aaCCTTGGGGCGGGTTTGCCAGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCAc > 2:131739/1‑149 (MQ=255) ccTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCa < 3:161882/149‑1 (MQ=255) gtaggagCGGGTTCACCCGCGAATGCGTCATTGATTTCAACGCCACATTCGCCGGCAAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAg > 6:60286/7‑149 (MQ=18) ttGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGc < 6:85514/121‑1 (MQ=255) ttGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTc > 7:53101/1‑130 (MQ=255) gggCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGcac < 7:304045/148‑1 (MQ=255) gggCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGcac < 2:304990/148‑1 (MQ=255) | GCAGCATTTGCAGAGCTTCTGGACGCCGGCGATGCGCCGGCAGCTGGCGGAATGGAGCGAGGCCCATGCGGGGGAGGGGCTTGATCCGAAGGTGCGGGAGGCGTTGGTCTAGACTCCCGGGCGGCAACGGAACCTTGGGGCGGGTTTGCCGGCGAATGTGGCGTTGAAATCAATGACGCATTCGCGGGTGAACCCGCTCCTACAAGGGGCCTGCATATTGCCTACTCAGCCGCGGGCCAGCTCCGCCAGGTGGGCGATGGCTTCCTCACTCTTGAGCACCAGCAC > NC_002947/2493549‑2493833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |