| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,656,167 | G→C | 6.9% | A8A (GCC→GCG) | cysH ← | phosphoadenosine phosphosulfate reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,656,167 | 0 | G | C | 6.9% | 219.2 / 7.0 | 72 | A8A (GCC→GCG) | cysH | phosphoadenosine phosphosulfate reductase |
| Reads supporting (aligned to +/- strand): ref base G (34/33); new base C (3/2); total (37/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.78e-01 | |||||||||||
CCTGCTTGTTCAGCTTCCAGGCCATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCATCAGCACCCGCACTTTGGCGAT > NC_002947/2656022‑2656315 | ccTGCTTGTTCAGCTTCCAGGCCATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGggcggc < 5:111192/148‑1 (MQ=255) ttGTTCAGCTTCCAGGCCATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTc > 4:116661/1‑149 (MQ=255) ttCCAGGCCATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTg > 5:28019/1‑149 (MQ=255) ccAGGCCATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTgg < 3:116661/148‑1 (MQ=255) aGGCCATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGtt < 5:290936/144‑1 (MQ=255) aGGCCATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCt > 5:128582/1‑148 (MQ=255) aGGCCATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCCGCCCTGGCCGCGAc < 6:289900/133‑1 (MQ=255) aGGCCATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCCGCCCTGGCCGCGAc > 5:289900/1‑133 (MQ=255) aGGCCATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTAGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGtt > 6:290936/1‑144 (MQ=255) cATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCACTAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCtcatc < 1:68549/149‑1 (MQ=255) gACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGggcggc < 4:320695/120‑1 (MQ=255) ccacATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCt > 2:119080/1‑149 (MQ=255) cacaTCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCtcatc > 4:131643/1‑133 (MQ=255) cacaTCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCtcatc < 3:131643/133‑1 (MQ=255) cacaTCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCTCTTTCCATCtt > 6:6070/1‑149 (MQ=255) cacaTCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCtt > 3:265903/1‑149 (MQ=255) tCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCtgtg > 8:241975/1‑149 (MQ=255) cTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTgc > 5:316834/1‑149 (MQ=255) gAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTgcgc > 3:11295/1‑149 (MQ=255) aGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTc < 6:128582/149‑1 (MQ=255) agaTCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCgta < 4:265903/149‑1 (MQ=255) cacaGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAgg < 7:241975/149‑1 (MQ=255) cacaGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAgg > 7:195477/1‑149 (MQ=255) acaGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAggg > 1:303195/1‑149 (MQ=255) gTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGAt > 5:255810/1‑149 (MQ=255) atcaCCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAggg > 7:276723/1‑142 (MQ=255) atcaCCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAggg < 8:276723/142‑1 (MQ=255) ccGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAgg < 4:37333/137‑1 (MQ=255) ccGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAgg > 3:37333/1‑137 (MQ=255) cTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGTGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATc > 5:306997/1‑149 (MQ=255) cTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAAt < 1:119080/148‑1 (MQ=255) cTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATc > 4:223729/1‑149 (MQ=255) tCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCg > 8:210765/1‑149 (MQ=255) tCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCg > 6:349375/1‑149 (MQ=255) gAAGGCTATCTTGAGGATGTCCTGCGGGGACTTGTTGTCA‑TAGGTCGCGGCCAGGGCGGCGACGTAGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGt < 5:6070/148‑1 (MQ=255) gAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTg > 8:64538/1‑149 (MQ=255) cAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTa < 8:195477/149‑1 (MQ=255) gCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGTGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGAt < 6:306997/149‑1 (MQ=255) gCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGAt > 1:174215/1‑149 (MQ=255) gCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGAt < 5:349375/149‑1 (MQ=255) ttGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGGTGGTAACAAAAAAATCGTGGTCTAGATgg > 1:65101/1‑149 (MQ=255) aGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCt > 1:327126/1‑149 (MQ=255) cTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGc < 6:316834/148‑1 (MQ=255) gCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACaaaaaa > 8:70706/1‑120 (MQ=255) gCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACaaaaaa < 7:70706/120‑1 (MQ=255) gCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCt > 2:41917/1‑149 (MQ=255) cGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGccc < 7:210765/147‑1 (MQ=255) cGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCt < 6:255810/148‑1 (MQ=255) cGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCt < 3:223729/148‑1 (MQ=255) gggACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGGTGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCa < 2:65101/149‑1 (MQ=255) gggACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTg > 5:112310/1‑147 (MQ=255) ggACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAg < 1:41917/149‑1 (MQ=255) cTTTTTGGCA‑TAGTTCTCGGCGAGTGCGGCGACGGCGAAGGGTGGGCTCATCAGGCGGTTTCCATCTTGGCTGTGTCGCTCTGCGCGCGTAGTAGGGGGTTGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGt < 6:326762/149‑1 (MQ=255) gttgGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTTGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTg > 1:136997/1‑149 (MQ=255) gttgGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCt < 2:303195/148‑1 (MQ=255) gttgGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTg > 1:305331/1‑149 (MQ=255) gttgGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTg > 4:323800/1‑149 (MQ=255) gttgGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTg > 5:20492/1‑149 (MQ=255) ttgGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGc < 2:174215/149‑1 (MQ=255) ttgGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGc < 7:64538/149‑1 (MQ=255) gCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCATc < 4:11295/149‑1 (MQ=255) cA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCATCa < 6:20492/149‑1 (MQ=255) cA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCATCa < 2:305331/149‑1 (MQ=255) cA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCATCa < 3:323800/149‑1 (MQ=255) tcgacgTCGCCGCCCTGGCCGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCAt > 4:326196/6‑147 (MQ=255) a‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGAt > 6:344538/1‑118 (MQ=255) a‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGAt < 5:344538/118‑1 (MQ=255) a‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATgg < 6:347255/120‑1 (MQ=255) cgacgTCGCCGCCCTGGCCGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCATCa < 3:326196/144‑1 (MQ=255) gacgTCGCCGCCCTGGCCGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCATCAg > 5:299012/4‑148 (MQ=255) aGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCAt < 5:251298/144‑1 (MQ=255) aGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCAt > 6:251298/1‑144 (MQ=255) gCCAGGGCGGCGACGTTGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATg < 2:271366/109‑1 (MQ=255) gCCAGGGCGGCGACGTTGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATg > 1:271366/1‑109 (MQ=255) ccctggccgcGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCATCAGCACCCGCACtt < 6:299012/145‑1 (MQ=255) ggcgACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCATCAGCACCCGCACTTTGGCGAt < 6:112310/149‑1 (MQ=255) | CCTGCTTGTTCAGCTTCCAGGCCATGTCGACCAGCACCACATCCTCGGCGCCGCTGAAGGAGATCCACAGGTCATCACCGAAGTGCTCGAAGGCAAGCTTGAGGATGTCCTGCGGGGACTTGTTGGCA‑TAGGTCGCGGCCAGGGCGGCGACGTCGAAGGGTTGGCTCATCAGGCGGTTTCCATCTTGGCTGTGGCGCTGTGCGCTCGTAGTAGGGGGATGGTAACAAAAAAATCGTGGTCTAGATGGGCTCACAAGCCCTGCAGGGTCTGCATCAGCACCCGCACTTTGGCGAT > NC_002947/2656022‑2656315 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |