| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,826,825 | G→C | 8.0% | A80P (GCA→CCA) | PP_2479 → | cytochrome c family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,826,825 | 0 | G | C | 8.0% | 232.2 / 9.4 | 75 | A80P (GCA→CCA) | PP_2479 | cytochrome c family protein |
| Reads supporting (aligned to +/- strand): ref base G (34/35); new base C (3/3); total (37/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.55e-01 | |||||||||||
GGGCGAATACCTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTATCTCGACAGCCTG > NC_002947/2826677‑2826971 | gggCGAATACCTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTg > 4:164855/1‑149 (MQ=255)gggCGAATACCTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTg > 1:296422/1‑149 (MQ=255) tACCTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGAc < 2:294951/149‑1 (MQ=255) cTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGa > 7:216001/1‑149 (MQ=255) aCGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTCCATGCACCGATgt < 4:132035/149‑2 (MQ=255) gcgcgcTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGAc > 2:17830/1‑148 (MQ=255) cgcgcTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGa < 2:296422/149‑1 (MQ=255) tGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCg > 1:206056/1‑149 (MQ=255) ccAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTc > 8:229900/1‑146 (MQ=255) ccAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTc < 7:229900/146‑1 (MQ=255) cAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCa < 1:17830/149‑1 (MQ=255) cTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTg < 8:32400/149‑1 (MQ=255) tgtgGCTTGCCATACCGTGCCTGGCGGTCAACCCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTgcg > 1:46856/1‑149 (MQ=255) tgtgGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTgcgc > 1:206021/1‑149 (MQ=255) tgGCTTGCCATACCGTGCCTGGCGGTCAA‑CGCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACTTTACCCCTGACCCGCATACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTg < 4:234648/149‑1 (MQ=255) gCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGt < 5:55551/137‑1 (MQ=255) gCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGt > 6:55551/1‑137 (MQ=255) ccATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCg < 2:229008/149‑1 (MQ=255) cATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCgg > 2:336834/1‑149 (MQ=255) cATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGATGCAGACCgg > 8:258872/1‑149 (MQ=255) gTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGAc < 7:299238/110‑1 (MQ=255) gTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCACGGACCCGCAAACCGGCATCGGTGCATGGAc > 8:299238/1‑110 (MQ=255) a‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGc < 2:46856/149‑1 (MQ=255) ccTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGAc > 5:167696/1‑140 (MQ=255) ccTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGAc < 6:167696/140‑1 (MQ=255) ttCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ac > 7:43457/1‑147 (MQ=255) cGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTAcc < 3:123317/149‑1 (MQ=255) gtTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACtactac < 7:55788/141‑1 (MQ=255) gtTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACtactac > 8:55788/1‑141 (MQ=255) ttGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGttt > 5:90646/1‑149 (MQ=255) aGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTccc < 2:206021/149‑1 (MQ=255) aGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTcc < 6:90646/148‑1 (MQ=255) gTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTAcc < 4:261608/137‑1 (MQ=255) gTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTAcc > 3:261608/1‑137 (MQ=255) gTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTccc > 5:286610/1‑148 (MQ=255) ttCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTg < 6:32294/112‑1 (MQ=255) cAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCACGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTg < 6:325637/110‑1 (MQ=255) cAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCACGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTg > 5:325637/1‑110 (MQ=255) aaGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATAc < 8:216001/149‑1 (MQ=255) gCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTcc < 7:306845/141‑1 (MQ=255) gCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTcc > 8:306845/1‑141 (MQ=255) cTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTcc > 4:302404/1‑129 (MQ=255) cTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTc > 1:220891/1‑149 (MQ=255) ccAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGCAACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTcgc < 1:248487/142‑1 (MQ=255) ccAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTcgc > 2:248487/1‑141 (MQ=255) ccAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATgc > 8:116848/1‑147 (MQ=255) cAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGt > 3:238892/1‑61 (MQ=255) cAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGt < 4:238892/61‑1 (MQ=255) cAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGAc > 3:281099/1‑148 (MQ=255) cccGGACCCGCAAACCGGCATCGGTGGATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGa > 1:186110/1‑149 (MQ=255) cccGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGa > 4:157988/1‑149 (MQ=255) cGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATc < 4:281099/149‑1 (MQ=255) cccGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCTGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAgg < 7:258872/149‑1 (MQ=255) cccGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAgg < 8:43457/149‑1 (MQ=255) cccGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAgg < 1:336834/149‑1 (MQ=255) ccGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAgg < 6:342638/148‑1 (MQ=255) ccGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAgg > 5:342638/1‑148 (MQ=255) gCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGAc < 6:236297/130‑1 (MQ=255) gCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGAc < 8:32129/130‑1 (MQ=255) gCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGAc > 5:236297/1‑130 (MQ=255) gCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGAc > 7:32129/1‑130 (MQ=255) gCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGtt < 2:220891/149‑1 (MQ=255) cAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTa < 6:286610/149‑1 (MQ=255) aaCCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATc < 8:164426/130‑1 (MQ=255) aaCCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATc > 7:164426/1‑130 (MQ=255) tcgtcATCGGTCCATGCACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTAtctc > 6:348769/5‑149 (MQ=255) cGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑ATC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTAtctc < 1:109397/148‑1 (MQ=255) cGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTAtctc > 2:109397/1‑148 (MQ=255) gtcATCGGTCCATGCACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCaa > 8:10806/3‑107 (MQ=255) gtcATCGGTCCATGCACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCaa < 7:10806/105‑1 (MQ=255) tcATCGGTCCATGCACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTc < 2:8374/111‑1 (MQ=255) tcATCGGTCCATGCACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTc > 1:8374/2‑112 (MQ=255) gCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTATCTCGAc < 7:116848/149‑1 (MQ=255) cATCGGTGCATGGACCCATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTATCTCGACa < 8:59923/149‑1 (MQ=255) gTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCATGGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTATCTCGACAGCCt > 1:100321/1‑149 (MQ=255) gTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTATCTCGACAGCCTg > 5:95254/1‑149 (MQ=255) gTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTATCTCGACAGCCTg > 2:236387/1‑149 (MQ=255) | GGGCGAATACCTGACGCGCGCTGCCAACTGTGTGGCTTGCCATACCGTGCCTGGCGGTCAA‑CCCTTCGCCGGTGGTGTTGAGTTCAAGCTGCCGTTCGGCTCGCTGTTTTCGCCCAACATTACCCCGGACCCGCAAACCGGCATCGGTGCATGGACCGATGACGAGTTCGTCAGTGCGCTGCAGACCGGCATTGGCCGTGACGGCA‑AGC‑ACTACTACCCGGCGTTTCCCTATACCTCCTACAGCAAAATGTCGCGCGATGACATCCTCGCGATCAAGGGTTATCTCGACAGCCTG > NC_002947/2826677‑2826971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |