| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,884,812 | C→G | 7.1% | P93A (CCG→GCG) ‡ | PP_2540 → | short‑chain dehydrogenase/reductase family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,884,812 | 0 | C | G | 7.1% | 266.9 / 7.6 | 84 | P93A (CCG→GCG) ‡ | PP_2540 | short‑chain dehydrogenase/reductase family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base C (38/40); new base G (3/3); total (41/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
TGGAGCAGACCGCCAGCGAGTTGCGCAGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTC > NC_002947/2884666‑2884957 | tGGAGCAGACCGCCAGCGAGTTGCGCAGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAGGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCg > 1:173408/1‑149 (MQ=255)tGGAGCAGACCGCCAGCGAGTTGCGCAGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGCTGGCCCg > 6:46759/1‑149 (MQ=255) gAGCAGACCGCCAGCGAGTTGCGCAGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGc > 8:48893/1‑148 (MQ=255) ccGCCAGCGAGTTGCGCAGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCgggg < 6:120250/149‑1 (MQ=255) ccGCCAGCGAGTTGCGCAGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCgggg < 6:19365/149‑1 (MQ=255) cGCCAGCGAGTTGCGCAGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCggggg > 5:164073/1‑149 (MQ=255) ccAGCGAGTTGCGCAGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGAc > 5:23818/1‑149 (MQ=255) gAGTTGCGCAGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCAG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCg > 6:360022/1‑149 (MQ=255) cgcAGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGAtt < 7:330146/148‑1 (MQ=255) aGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCGGGCCACCggcg > 5:8552/1‑130 (MQ=255) aGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCGGGCCACCggcg < 6:8552/132‑3 (MQ=255) aGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTgggg > 4:128381/1‑149 (MQ=255) ggCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCGGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGc < 6:195450/149‑1 (MQ=255) gCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCg > 3:40603/1‑149 (MQ=255) gCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCGGCTTTGGCGGCCAGCCCCCAGGGACAAATTAGGGTAAAAAACCCCGGTGGCCCCCCCCCGGGGGAATTACGTGATTggggg > 1:282234/1‑149 (MQ=255) tGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGtga > 5:25311/1‑149 (MQ=255) gCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATACCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAAAGCCGGTGGCCCGCCACCGGGGGACTTCCGt > 3:259959/1‑134 (MQ=255) cccGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGtgatg < 6:164073/149‑1 (MQ=255) ccGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTcc > 3:73877/1‑130 (MQ=255) ccGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTcc < 4:73877/130‑1 (MQ=255) cGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGAc < 6:23818/149‑1 (MQ=255) gggAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACt < 6:25311/149‑1 (MQ=255) gggAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACt < 4:112546/149‑1 (MQ=255) aaTCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAGGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACACTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGc < 5:101964/149‑1 (MQ=255) ggTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTACCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACt < 3:270583/140‑1 (MQ=255) ggTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTACCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACt > 4:270583/1‑140 (MQ=255) cATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCt < 3:128381/149‑1 (MQ=255) cATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCt > 2:76576/1‑149 (MQ=255) tACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTgg < 7:240866/149‑1 (MQ=255) ccGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGAc < 4:146410/149‑1 (MQ=255) gCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGtgat > 6:207640/1‑123 (MQ=255) gCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGtgat < 5:207640/123‑1 (MQ=255) gCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCaa < 4:40603/149‑1 (MQ=255) gCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCaa < 2:282234/149‑1 (MQ=255) ggCGATGTTGCCGATCCCAGGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACAt < 2:173408/149‑1 (MQ=255) gCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGAtt < 4:281114/108‑1 (MQ=255) gCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGAtt > 3:281114/1‑108 (MQ=255) gTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCAc > 8:315607/1‑149 (MQ=255) ttGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGAAGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACg > 5:32591/1‑149 (MQ=255) tGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGGCTGGCTGAAGGCGCTGGACGCCAACATGCTCACGc > 2:148700/1‑149 (MQ=255) ccGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGc < 8:219158/141‑1 (MQ=255) ccGATCCCAAGGTGCGCCAGGCGCAG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGc > 7:219158/1‑141 (MQ=255) cGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCGGGCCACCggcgt < 8:83779/86‑4 (MQ=255) cGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCGGGCCACCggcgt > 7:83779/1‑83 (MQ=255) cGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCa > 6:212784/1‑149 (MQ=255) aTCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATc < 1:76576/149‑1 (MQ=255) cAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGTGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGc > 5:58787/1‑149 (MQ=255) cAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGCCTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGc < 1:148700/149‑1 (MQ=255) gcTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCggtgg < 7:315607/149‑1 (MQ=255) tG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGa > 7:267792/1‑135 (MQ=255) tG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGa < 8:267792/135‑1 (MQ=255) ggcggcCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGTGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGat < 6:58787/148‑1 (MQ=255) cggcCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCggtgg > 4:61312/1‑141 (MQ=255) cggcCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCggtgg < 3:61312/141‑1 (MQ=255) cggcCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGatggc < 5:46759/149‑1 (MQ=255) tGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCggtggt < 4:262445/137‑1 (MQ=255) tGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCggtggt > 3:262445/1‑137 (MQ=255) cccGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGcc < 7:48893/148‑1 (MQ=255) gCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGa < 7:316972/119‑1 (MQ=255) gCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGa > 8:316972/1‑119 (MQ=255) gTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGtgat > 3:242963/1‑66 (MQ=255) gTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGtgat < 4:242963/66‑1 (MQ=255) gTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTgg > 2:326162/1‑149 (MQ=255) gTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTgg > 3:35464/1‑149 (MQ=255) gTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTgg > 8:97592/1‑149 (MQ=255) aTTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTgg > 5:273320/1‑149 (MQ=255) ttCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCATGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCg < 6:3947/102‑1 (MQ=255) ttCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCATGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCg > 5:3947/1‑102 (MQ=255) gTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTTGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGggt < 5:360022/149‑1 (MQ=255) gTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGggt > 6:356581/1‑149 (MQ=255) aacaacGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGggtggt > 3:305405/1‑149 (MQ=255) aacaacGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGggtggt < 5:356581/149‑1 (MQ=255) acaacGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGggtggt > 7:179540/1‑148 (MQ=255) aacGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGGGTGGTGaa < 4:35464/149‑1 (MQ=255) aacGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGGGTGGTGaa < 5:212784/149‑1 (MQ=255) ccGGTGGCGGGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGGGTGGTGAatat > 6:278042/1‑148 (MQ=255) ccGGTGGCGGGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGGGTGGTGAATATc < 5:278042/149‑1 (MQ=255) cGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGatggcatgg < 7:40799/116‑1 (MQ=255) cGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGatggcatgg > 8:40799/1‑116 (MQ=255) ggCCCGCCACCGGGTGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCGACATGCTCACGCCCAGCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGGGGTTTTGGCCGGGTGGTGAATATCACCTc < 2:313408/149‑1 (MQ=255) ggCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGatg < 5:52356/106‑1 (MQ=255) ggCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGatg > 6:52356/1‑106 (MQ=255) gCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTAGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATGAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGggtg < 3:88907/134‑1 (MQ=255) gCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTAGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGggtg > 4:88907/1‑134 (MQ=255) | TGGAGCAGACCGCCAGCGAGTTGCGCAGGGCCTGCCCGGGAATCGAGGTCCATACCGTGGCAGGCGATGTTGCCGATCCCAAGGTGCGCCAGGCGCTG‑‑TTGGCGGCCTGCCCGCAGGTCGACATTCTGGTCAACAACGCCGGTGGCCCGCCACCGGGGGACTTCCGTGATTGGGGGCGTGATGACTGGCTGAAGGCGCTGGACGCCAACATGCTCACGCCCATCGAGCTGATCAAGGCGGTGGTAGATGGCATGGCCGAGCGTGGTTTTGGCCGGGTGGTGAATATCACCTC > NC_002947/2884666‑2884957 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |