New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 247038	1 (0.030)	30 (0.870)	27/288	0.4	63.8%	coding (1216/1911 nt)	yheS	ABC transporter ATP‑binding protein
	?	NC_002947	2177702 =	33 (0.950)					intergenic (+103/‑63)	PP_5485/PP_1931	GNAT family acetyltransferase/hypothetical protein

AGGTGAGCTGGAGCCGTTGTCGGGCCGCCTGGTTCGTGGCGAGAACCTGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/246899‑247038 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCCTGGACGACTACGTCACCGAT  >  NC_002947/2177702‑2177842                                                                                                                                                                                                                                                                                           AGGTGAGCTGGAGCCGTTGTCGGGCCGCCTGGTTCGTGGCGAGAACCTGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCTGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGT                                                                                                                                       <  2:72600/148‑1   GTGAGCTGGAGCCGTTGTCGGGCCGCCTGGTTCGTGGCGAGAACCTGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGT                                                                                                                                     <  1:147542/148‑1           GAGCCGTTGTCGGGCCGCCTGGTTCGTGGCGAGAACCTGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGC                                                                                                                             >  1:115191/1‑148                      GGGCCGCCTGGTTCGTGGCGAGAACCTGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGT                                                                                                                   >  8:16122/1‑147                       GGCCGCCTGGTTCGTGGCGAGAACCTGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGCCGACACGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTC                                                                                                                  >  1:180126/1‑147                        GCCGCCTGGTTCGTGGCGAGAACCTGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCGGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTA                                                                                                                <  8:96742/148‑1                                 TTCGTGGCGAGAACCTGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTG                                                                                                        <  6:45436/147‑1                                         GAGAACCTGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTG                                                                                               >  3:133133/1‑148                                               CTGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTG                                                                                         <  7:84536/148‑1                                                TGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGG                                                                                        >  1:11595/1‑148                                                TGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGG                                                                                        <  2:115191/148‑1                                                   CGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCGCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGG                                                                                       <  5:112908/146‑1                                                   CGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGA                                                                                     <  3:83918/148‑1                                                        GGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATC                                                                                >  2:196734/1‑148                                                          CTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCAT                                                                              <  7:43866/148‑1                                                          CTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCAT                                                                              <  2:175582/148‑1                                                              TTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCGGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAA                                                                           <  4:79588/147‑1                                                                   CCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGAT                                                                      >  4:62203/1‑147                                                                     AGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCCTCGCCCCTACCGAGCCAGACTGTGTGAAACCGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCA                                                                   >  7:89867/1‑148                                                                                      CTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTC                                                    <  2:82347/146‑1                                                                                           CGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTTGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCA                                             <  5:94210/148‑1                                                                                            GACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAG                                            <  2:11595/148‑1                                                                                                    CAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATT                                    >  1:1190/1‑148                                                                                                                    TTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCCTG                    <  5:14913/148‑1                                                                                                                    TTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCCT                     >  4:47518/1‑147                                                                                                                    TTGCAGCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGGTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCCTG                    <  2:180126/148‑1                                                                                                                         GCGCATCGCCCCTACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCCTGGACGA               >  6:147362/1‑148                                                                                                                                     TACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCCTGGACGACTACGTCACCGA   <  7:107290/148‑1                                                                                                                                     TACCGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCCTGGACGACTACGTCACCGA   <  2:26126/148‑1                                                                                                                                        CGAGCCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCCTGGACGACTACGTCACCGAT  <  3:119173/146‑1                                                                                                                                                                                                                                                                                           AGGTGAGCTGGAGCCGTTGTCGGGCCGCCTGGTTCGTGGCGAGAACCTGGCGGTAGGCTACTTTGCCCAGCACCAGCTGGACTCGCTGGACGACAAGGCCAGCCCCCTGCTGCACTTGCAGCGCATCGCCCCTACCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/246899‑247038 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAGACTGTGTGAAAACGCCCGCGGTTGTCTAACCTTCTGGTCGTCGTGACCGTGGGGACAATCATGAAGCGATTCATCGAAGGTGAGGCTCGAACGCAGGTTACATTGCTGCCGGAGTGCCTGGACGACTACGTCACCGAT  >  NC_002947/2177702‑2177842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.