| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1426981 | NA (NA) | 6 (0.180) | 5/278 | 3.9 | NA | coding (879/1422 nt) | PP_1250 | group II intron‑encoding maturase |
| ? | NC_002947 | = 1427010 | NA (NA) | coding (908/1422 nt) | PP_1250 | group II intron‑encoding maturase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CAAGGCGGCCCGCTCTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1426829‑1426981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcagcTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGG < NC_002947/1427010‑1426864 CAAGGCGGCCCGCTCTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCTAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGG < 8:168781/148‑1 GGCGGCCCGCTCTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACCTCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCA > 7:53856/1‑148 GGCGGCCCGCTCTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCA < 2:146296/148‑1 CGGCCCGCTCTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGC > 7:51562/1‑148 CGGCCCGCTCTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGC < 4:12842/148‑1 CCGCTCTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCT > 1:119080/1‑145 TCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGA < 4:106052/147‑1 ACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCA < 7:119468/147‑1 ACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGGACGTTATGCCGTTGATGCGAAGATCTATGTACGCAGTGCCCGGGCCGGCGAACGGGTGTTGGTCAGCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAA < 7:176010/148‑1 AACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACAC < 7:20679/148‑1 AACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACAC < 2:119080/148‑1 GTCAGCTTCAGACTTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGA < 6:33498/148‑1 GTCAGCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGA > 2:75880/1‑148 GTCAGCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGA < 6:177982/148‑1 TCAGCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAG < 7:160517/148‑1 TCAGCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGACGA > 7:119177/1‑147 CAGCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGC < 5:19548/148‑1 GCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAG < 1:196439/148‑1 GCTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCA < 2:92230/147‑1 CTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGG > 5:149223/1‑148 CTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGG < 1:77145/148‑1 CTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGG > 1:172518/1‑148 CAAGGCGGCCCGCTCTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCGAGCTGGAGCGGCGGGGCCATCGCTTCGTACGTTATGCCGATGATGCGAACATCTATGTACGCAGTCCCCGGGCCGGCGAACGGGTGTTGGTCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1426829‑1426981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcagcTTCAGACGTTCTCTCAGGAAGCGCTCGACGCTGACCAACACCCGTTCGCCGGCCCGGGGACTGCGTACATAGATGTTCGCATCATCGGCATAACGTACGAAGCGATGGCCCCGCCGCTCCAGCTCGCGGTCGAGTTCGTCGAGCAGG < NC_002947/1427010‑1426864 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |