| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 278,744 | +A | intergenic (‑239/+75) | PP_0224 ← / ← sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 278,742 | 1 | . | A | 94.4% | 233.3 / 5.4 | 72 | intergenic (‑237/+77) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (0/4); new base A (30/38); total (30/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑T‑AA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCT > NC_002947/278598‑278885 | tCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑T‑aaac < 4:17045/149‑3 (MQ=255)tCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑T‑aaac > 6:363420/1‑147 (MQ=255)tCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑T‑aaa < 6:304562/148‑2 (MQ=255) cGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑ttaacc > 3:35094/1‑144 (MQ=255) tACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGc > 3:180845/1‑149 (MQ=255) cAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTc < 2:227697/149‑1 (MQ=255) cTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTa > 2:148083/1‑149 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTacag < 5:106207/149‑2 (MQ=255) tagcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTacaca < 8:131846/147‑1 (MQ=255) cAGACGTGTGCTGGTGCGGTGGTGCGGTATATATTCCGTAATGATTTATAAAATTTTTATGAACTAACTTTTTTGAATATTTATAGAAGGGGGATTTGTTGCAGAGGTGCCTGGCTCTTCGCTGG‑TAAA‑‑CCCGCTCCTACACACATGcc < 5:159286/149‑1 (MQ=255) gtgtGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGTAATATTTATAGAAGGGGGATTTGTTACAGATGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAg < 7:25639/149‑1 (MQ=255) gtgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGAt < 4:242940/149‑1 (MQ=255) cTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCtg > 5:380059/1‑149 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCtgtg < 5:110427/148‑1 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCtgtg > 7:114489/1‑148 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGc < 8:146628/149‑1 (MQ=255) tccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCC‑GGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCt > 2:360885/1‑135 (MQ=255) tccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCC‑GGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCt < 1:360885/135‑1 (MQ=255) ggtggtccggtATATATACGCTAATGATTTATAAAATTTTTATGAACTTACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTg < 5:140871/149‑1 (MQ=255) ggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTg < 7:309680/149‑1 (MQ=255) ttgtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTa < 5:183598/147‑1 (MQ=255) tggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTa < 8:396802/149‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAg < 2:21977/148‑1 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAg < 6:69513/148‑1 (MQ=255) ccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑t > 1:383521/1‑103 (MQ=255) ccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑t < 2:383521/103‑1 (MQ=255) cggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGc < 1:216164/149‑1 (MQ=255) gtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg > 2:279015/1‑149 (MQ=255) tatataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGACGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGt < 6:380059/148‑1 (MQ=255) tataCCCTAATTATTTAAAAAATTTTTATGAACTAACTTTTTGTAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTa < 8:289380/149‑1 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAc > 8:206330/1‑149 (MQ=255) cccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcg < 5:363420/149‑1 (MQ=255) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCAGCTCCTACAAACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcgc > 3:360001/1‑149 (MQ=255) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑ACCGCTCCTACCCACCTGCCACAAGAAGTGTGCACTGTAGGAGCGGGTGTACgcgc > 4:345464/1‑149 (MQ=255) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑ACCGCTCCTAAACACAAGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCagc > 4:191401/1‑149 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAg < 8:157859/131‑1 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAg > 7:157859/1‑131 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcgcg > 6:174177/1‑148 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCATACACACATGCCTAAAGATCTGTGCAATGTAGGAGCGGGTTTAACcgct > 7:312101/1‑147 (MQ=255) tAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAA‑GGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGa > 2:297119/1‑148 (MQ=255) aTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGaaa < 8:114489/149‑1 (MQ=255) ttaTTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTc < 8:347974/93‑1 (MQ=255) tGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTc > 7:347974/1‑95 (MQ=255) aTTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAggg < 5:96775/149‑1 (MQ=255) ttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGcc > 6:406208/1‑149 (MQ=255) tataAAATTTTTATGAACTAACTTTTTGCAATATTTATCGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGcc < 7:355433/148‑1 (MQ=255) ataAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCg > 7:213172/1‑148 (MQ=255) aaaaaaTTTTTATTAAATAACTTTTTGTAATATTTATATATGGGGTATTTTTTACAGAGGTGCCGGGCTCTTCGCGGT‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTCGTAGGGGTTTTACCCGCGAAAGGGCCg < 4:180845/146‑1 (MQ=255) aTTTTTATTAATTAAATTTTTGTAATATTTTTTGAAGGGGTATTTGTTACTGAGGTGCCGGGGTCTTCGCGGT‑TAAA‑‑CCCGCTCCTACAAACATGCCTCAATTTCTGTGCAGTGTTGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAg < 8:312101/149‑1 (MQ=255) aTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAg < 6:354997/149‑1 (MQ=255) tttttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAgg > 6:220019/1‑149 (MQ=255) tttttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCCTCGCGGG‑TAAA‑‑CCCCCTCCTACACACATTCATAAAGATCTGTTCACTGTAGTAGCGGGTTTACCCGCGAAAGTGCCGG‑AAAAgg > 3:179719/1‑149 (MQ=255) ttttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑AACGCTCCTACAAAAAATCCTAAATATATGTGGACAGTTTGAGCGGGTTTAACCGCGAAAGGGCCGG‑AACAGGt > 3:422659/1‑149 (MQ=255) ttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGtt < 5:174177/148‑1 (MQ=255) ctaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCtgt < 2:354102/97‑1 (MQ=255) ctaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCtgt > 1:354102/1‑97 (MQ=255) ctaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑ACCGCTCCTACACACATGACTCAAGATCTGTGCACTGTAGGAGCGGGTTTAACCGCGAAAGGGCCGG‑AACAGGTTTACTCg > 1:423543/1‑147 (MQ=255) ataactTTTTGTAATATTTATATAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGTAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGa < 8:213172/148‑1 (MQ=255) tttttGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCg > 4:106275/1‑149 (MQ=255) ggAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCt < 4:152240/85‑1 (MQ=255) aaTTTTTATAGATGGGGCATTTGTAACCGAGGGGCGGGGCTTTCCGGGGGAA‑AA‑‑CCCGCTACACCACACTTGCCTAAATTTGTTTGCACTGTCGGAGGGTTTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTcc < 4:422659/148‑1 (MQ=255) aaTATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTccc > 4:261738/1‑149 (MQ=255) atatTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTCCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTccc < 1:148083/148‑1 (MQ=255) ataGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAAc > 6:135390/1‑149 (MQ=255) ataGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTACTACACACATGGCTCAAGATCTGTGGACTGTAGGAGCGGGTTTTCCCGCGAAAGGGCCGG‑AACAGGTTTTCTCGGATGCCGCAGTCCCGATGaaa > 5:15090/1‑148 (MQ=255) taGAA‑GGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGTAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAAc < 1:297119/148‑1 (MQ=255) ggATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAg < 3:106275/149‑1 (MQ=255) ttttttaaCAGGGGTGCGGGGCTCTTCGGGGT‑T‑AAC‑CCCGCCCCTACACACTTGCCTCAATATCTGTGCACTTTCGTTGGGGTTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGa < 2:423543/141‑1 (MQ=255) aTTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGaa > 3:56217/1‑149 (MQ=255) tttGTTACAGAGGTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAAc > 7:294156/1‑149 (MQ=255) ggTGCCGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACg < 7:206330/149‑1 (MQ=255) gTGCCGGGGTCGTCGCGGG‑A‑AAC‑CCCGCTCCTACACACATGCCTCAAGTTCGTTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACg < 4:179719/148‑1 (MQ=38) ccGGGCTCTTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGctc < 1:279015/148‑1 (MQ=255) ggggCTCTGCG‑GGG‑T‑AACCCCCGCTCCTACACACAGCCCACAAGATCTGTCCAGTGTCGGCGGGGTTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGctct < 7:155787/147‑1 (MQ=255) ctctTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttcctt < 5:135390/149‑1 (MQ=255) tctTCGCGGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttccttc > 6:436462/1‑149 (MQ=255) cgcgGG‑TAAA‑‑CCCGCTCCTACCCACATGCCTCACGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCg < 3:345464/146‑1 (MQ=255) cgGG‑TAAA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCt > 4:390725/1‑149 (MQ=255) | TCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGG‑T‑AA‑‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGG‑AACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGCT > NC_002947/278598‑278885 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |