Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	336,125	+T	coding (210/237 nt)	PP_0278 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	336,124	1	.	T	100.0%	209.9 / NA	62	D70V (GAT→GTT)	PP_0278	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base T (33/29);  total (33/29)

AACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGAT  >  NC_002947/335979‑336266                                                                                                                                                     |                                                                                                                                               aaCCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑tt                                                                                                                                              <  7:378611/148‑2 (MQ=255)    ccATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑ttacct                                                                                                                                          <  8:368827/149‑6 (MQ=255)    ccATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑ttacct                                                                                                                                          >  7:262724/1‑144 (MQ=255)         ccTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCg                                                                                                                                      <  4:147540/149‑1 (MQ=255)             aaTCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGAc                                                                                                                                    <  5:224601/147‑1 (MQ=255)              aTCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑tt                                                                                                                                              <  1:336534/135‑2 (MQ=255)              aTCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCATGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑tt                                                                                                                                              >  2:336534/1‑134 (MQ=255)                 tcCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGc                                                                                                                               >  6:80678/1‑148 (MQ=255)                 tcCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGc                                                                                                                               >  6:66574/1‑148 (MQ=255)                   cTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGcc                                                                                                                              >  2:436861/1‑147 (MQ=255)                    tACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAg                                                                                                                           >  4:347250/1‑149 (MQ=255)                    tACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAg                                                                                                                           >  2:415601/1‑149 (MQ=255)                        cgTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGgcgc                                                                                                                       <  8:191794/149‑1 (MQ=255)                               cccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGaa                                                                                                                >  6:411705/1‑149 (MQ=255)                                ccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAAc                                                                                                               <  8:262724/149‑1 (MQ=255)                                ccGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAAc                                                                                                               <  1:436861/149‑1 (MQ=255)                                      tCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATc                                                                                                         <  5:80678/149‑1 (MQ=255)                                          cGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGTGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGCCATGGCCAAGGCGCTGATGAACGATATCga                                                                                                       >  1:135789/1‑149 (MQ=255)                                          cGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATgg                                                                                                                                >  5:319858/1‑122 (MQ=255)                                          cGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATgg                                                                                                                                <  6:319858/122‑1 (MQ=255)                                                     ccTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑t                                                                                                                                               <  6:41583/95‑1 (MQ=255)                                                     ccTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑t                                                                                                                                               >  5:41583/1‑95 (MQ=255)                                                       tACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAAc                                                                                                               <  6:89874/126‑1 (MQ=255)                                                       tACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAAc                                                                                                               >  5:89874/1‑126 (MQ=255)                                                        aCGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAg                                                                                       >  6:290472/1‑149 (MQ=255)                                                          gAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGgc                                                                                     >  2:148052/1‑149 (MQ=255)                                                          gAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGgc                                                                                     >  6:164113/1‑149 (MQ=255)                                                             cATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGgcgc                                                                                   <  5:146135/148‑1 (MQ=255)                                                               tGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCAtt                                                                                <  5:66574/149‑1 (MQ=255)                                                                   tcGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAgg                                                                             >  5:393724/1‑148 (MQ=255)                                                                          tGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCaa                                                                                              >  1:325294/1‑124 (MQ=255)                                                                          tGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCaa                                                                                              <  2:325294/124‑1 (MQ=255)                                                                            aTGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATTAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCt                                                                                                                      <  7:347943/98‑1 (MQ=255)                                                                                 cTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAt                                                              >  5:51554/1‑149 (MQ=255)                                                                                 cTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAt                                                              <  3:397201/149‑1 (MQ=255)                                                                                 cTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAt                                                              >  7:105410/1‑149 (MQ=255)                                                                                  tACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGTCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCAt                                                                                 >  6:457635/1‑129 (MQ=255)                                                                                  tACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCAt                                                                                 <  5:457635/129‑1 (MQ=255)                                                                                    cctcgcgCACCAGGTGCGCGAG‑‑GGCGATATTGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTa                                                                               <  6:277376/123‑1 (MQ=255)                                                                                    cctcgcgCACCAGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTa                                                                               >  5:277376/7‑129 (MQ=255)                                                                                    cATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGAAGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGt                                                                                          <  2:306810/118‑1 (MQ=255)                                                                                    cATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGAAGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGt                                                                                          >  1:306810/1‑118 (MQ=255)                                                                                     aTCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTtgt                                                          <  5:411705/149‑1 (MQ=255)                                                                                      tCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTtgtg                                                         >  7:369373/1‑149 (MQ=255)                                                                                      tCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTtgtg                                                         <  1:148052/149‑1 (MQ=255)                                                                                      tCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTtgt                                                          >  6:274345/1‑148 (MQ=255)                                                                                      tCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTtgt                                                          <  5:274345/148‑1 (MQ=255)                                                                                       cAAGCACCTGGTGCGCGAG‑‑GGCGAGATGGAGGACGACCATAAATTCCTGGGGGCCGCCGATTACCTGTGCGACATGGCCCAGGCGCTGATGAACGATATCGAGATCACCAAGGGTAAGGCGCATTAGGCATTGCCGCGGTCATTTGTgg                                                        >  6:317551/1‑149 (MQ=255)                                                                                        aaGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTgg                                                        <  1:190829/148‑1 (MQ=255)                                                                                           cACCTGGTGCGCGAG‑‑GGCGATATGGAGCACGACCATAAAATCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGc                                                    >  7:86379/1‑149 (MQ=255)                                                                                            aCCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCg                                                   >  2:200831/1‑149 (MQ=255)                                                                                              cTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGc                                                 <  6:51554/149‑1 (MQ=255)                                                                                               tGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCTCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGTTCATTTGTCGTAGCGGcc                                                >  4:56594/1‑149 (MQ=255)                                                                                               tGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGAAGCGGTCATTTGTGGGAGCGGcc                                                >  3:301148/1‑149 (MQ=255)                                                                                                 gTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCtt                                              >  6:299562/1‑149 (MQ=255)                                                                                                        aG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTcgc                                       <  6:393724/149‑1 (MQ=255)                                                                                                        aG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTcgc                                       <  5:299562/149‑1 (MQ=255)                                                                                                                     gaggaCGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGc                                                    >  2:105938/1‑125 (MQ=255)                                                                                                                           gacCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAagca                      <  1:415601/149‑1 (MQ=255)                                                                                                                             ccATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGAGCTGATGAACGATATCGAGATCGACAAGGGTAAGGAGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCATTGCGTCGCGAATGGGCTGCAAagcagc                    >  7:390425/1‑149 (MQ=255)                                                                                                                               aTAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGccc                  >  3:397440/1‑149 (MQ=255)                                                                                                                                 aaaTTACTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCTCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCTCGAATGGGCTGCAAAGCAGccc                  <  8:105410/147‑1 (MQ=39)                                                                                                                                   aTTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGc              >  5:434074/1‑149 (MQ=255)                                                                                                                                   aTTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGc              <  3:347250/149‑1 (MQ=255)                                                                                                                                   aTTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGc              <  5:290472/149‑1 (MQ=255)                                                                                                                                          ggggCAGCCTATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGAttt         <  1:200831/147‑1 (MQ=255)                                                                                                                                               tgCCGATTACCTGTGCGACATGGACAAGGCGCTGATGAACGATATCTAGATCGCCAAGGTTAAGGCGCATTTGGCTTTGACTCGGTCATTTGTGGGATCGGCCTTGCGTCGCGAATGGGCTTCAAAGCAGCCCCGGCGATTTCag      <  8:208053/144‑1 (MQ=255)                                                                                                                                               aGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCag      >  7:208053/1‑145 (MQ=255)                                                                                                                                               aGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGAt  >  4:314458/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                               AACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAG‑‑GGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATCGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGAGAT  >  NC_002947/335979‑336266

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑