Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947195,6340CT45.4% 62.2 / 145.5 119T380T (ACC→ACT) PP_0168putative surface adhesion protein
Reads supporting (aligned to +/- strand):  ref base C (31/34);  new base T (26/28);  total (57/62)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 132 total aligned reads displayed.

ATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGG  >  NC_002947/195489‑195779
                                                                                                                                                 |                                                                                                                                                  
aTTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACaccaccacc                                                                                                                                                 >  6:122924/1‑149 (MQ=39)
      aGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑Acc                                                                                                                                          <  5:122924/149‑1 (MQ=39)
           ccGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGAc                                                                                                                                     >  3:199609/1‑149 (MQ=39)
              gCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGc                                                                                                                                  <  4:199609/149‑1 (MQ=39)
               cgaaTGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCg                                                                                                                                 <  2:446731/147‑1 (MQ=2)
                      cGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGt                                                                                                                          >  1:59521/1‑149 (MQ=17)
                        tCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCg                                                                                                                        <  6:434746/149‑1 (MQ=37)
                        tCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCg                                                                                                                        <  5:447209/149‑1 (MQ=37)
                        tCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCg                                                                                                                        <  4:339667/149‑1 (MQ=37)
                         cttcaagaaCGGTTCTCCCTTCAGCGTCACCTTCGAGAACGCCACAGGCTGTAATTTCGTGCAACAGTCCCCGTATCCGACCCCGGCTCAGACCACGATGAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCg                                                                                                                        <  8:220374/145‑1 (MQ=11)
                           acaacaACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGt                                                                                                                      >  8:356694/1‑148 (MQ=37)
                            caacaaCGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTc                                                                                                                     <  4:191238/148‑1 (MQ=17)
                            caacaaCGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTc                                                                                                                     <  1:426492/148‑1 (MQ=17)
                             aacaacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACCCCACCACCGCG‑CCCCTGCCGGCGAGCCCGTCGGTCAc                                                                                                                   >  8:76540/1‑149 (MQ=255)
                               caacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑a                                                                                                                                            >  5:130776/1‑122 (MQ=38)
                                aacGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCg                                                                                                                 >  6:298031/1‑148 (MQ=17)
                                aacGGTTCGACCGTCAGCGTCAACATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTcccag                                                                                                                 >  8:281572/1‑144 (MQ=255)
                                 acGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGaa                                                                                                               <  2:17745/149‑1 (MQ=37)
                                 acGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGaa                                                                                                               <  5:35693/149‑1 (MQ=37)
                                 acGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGaa                                                                                                               <  4:172780/149‑1 (MQ=37)
                                        gACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGgcggcg                                                                                                        <  4:282723/149‑1 (MQ=37)
                                        gACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCAGACGGCGAGCCCGTCGGACACCGAAGgcggcg                                                                                                        >  2:258576/1‑149 (MQ=255)
                                         aCCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGt                                                                                                       >  3:358132/1‑149 (MQ=17)
                                         aCCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGt                                                                                                       >  5:247742/1‑149 (MQ=17)
                                               aGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGTTCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCa                                                                                                  >  6:310284/1‑148 (MQ=255)
                                               aGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCa                                                                                                  <  5:158536/148‑1 (MQ=39)
                                                gCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGAt                                                                                                    <  3:441471/145‑1 (MQ=17)
                                                gCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGAt                                                                                                    >  4:441471/1‑145 (MQ=17)
                                                gCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACt                                                                                                >  2:52584/1‑149 (MQ=17)
                                                  gTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTa                                                                                              <  2:59521/149‑1 (MQ=17)
                                                   tCACCATCGAGAACGCCACCGCCGGTAATTTCGAGCAACAGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTac                                                                                             <  5:242839/149‑1 (MQ=255)
                                                     aCCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTaca                                                                                            <  2:51890/148‑1 (MQ=17)
                                                       cATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCt                                                                                                                                        >  2:406787/1‑102 (MQ=40)
                                                       cATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCt                                                                                                                                        <  1:406787/102‑1 (MQ=40)
                                                            agaACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGAcc                                                                                    >  4:217143/1‑149 (MQ=39)
                                                            agaACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGAcc                                                                                    <  6:246725/149‑1 (MQ=17)
                                                               aCGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTg                                                                                 <  5:298031/149‑1 (MQ=17)
                                                                 gCCACAGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCGGAGACCACGCTCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTGGGTCACCGAAGGCGGCGGGGTAACTTACACCGTGCCCCTGAg                                                                               >  2:261587/1‑149 (MQ=11)
                                                                    aCCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACGCTGACGGCGAGCCCg                                                                                                                           <  7:237589/102‑1 (MQ=255)
                                                                    aCCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCg                                                                                                                           >  8:237589/1‑102 (MQ=40)
                                                                     ccGGCGTTAATTTCGAGCATCTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAc                                                                           <  7:90742/149‑1 (MQ=255)
                                                                     ccGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAc                                                                           >  7:240731/1‑149 (MQ=39)
                                                                     caggcggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAc                                                                           <  5:226271/147‑1 (MQ=17)
                                                                      cggcggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGTTCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAcc                                                                          <  5:310284/149‑1 (MQ=255)
                                                                      aggcggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAcc                                                                          <  1:172634/148‑1 (MQ=18)
                                                                      aggcggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAAcc                                                                          <  8:331638/148‑1 (MQ=18)
                                                                        gcggTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCt                                                                        <  3:334695/149‑1 (MQ=21)
                                                                             aaTTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGccc                                                                    <  4:5638/148‑1 (MQ=17)
                                                                               tttCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGAGTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGa                                                                 <  3:417505/149‑1 (MQ=255)
                                                                               tttCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGa                                                                 >  2:325466/1‑149 (MQ=39)
                                                                               tcgcGACCAACTGACCCCCAATCCCACCCCGGCTCACACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGa                                                                 <  6:279990/146‑1 (MQ=11)
                                                                                ttCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGAc                                                                >  7:403539/1‑149 (MQ=39)
                                                                                   gAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTaca                                                                                            >  5:334002/1‑118 (MQ=17)
                                                                                   gAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTaca                                                                                            <  6:334002/118‑1 (MQ=17)
                                                                                         cTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAAc                                                       >  7:141133/1‑149 (MQ=39)
                                                                                              cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGa                                                  >  8:356481/1‑149 (MQ=12)
                                                                                              cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTg                                                   >  6:184200/1‑148 (MQ=255)
                                                                                              cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTg                                                   >  5:166466/1‑148 (MQ=255)
                                                                                              cccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTg                                                   >  4:58433/1‑148 (MQ=255)
                                                                                               ccGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCGAAACCAGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGa                                                  >  1:356730/1‑149 (MQ=11)
                                                                                                cGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGATGCCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTGACCGTGacc                                                >  5:321924/1‑147 (MQ=2)
                                                                                                cGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAggcggc                                                                                                         <  2:240565/92‑1 (MQ=37)
                                                                                                cGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAggcggc                                                                                                         >  1:240565/1‑92 (MQ=37)
                                                                                                cGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAAc                                                >  8:284809/1‑149 (MQ=255)
                                                                                                cGAACCCGACCCCGGCTCCCACCCCCATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGAGAGCCCGTCGGTCACCGATGGCGGCGTGATCACTTACACCGTGACCCt                                                                                  <  8:70411/115‑1 (MQ=11)
                                                                                                  aaTCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCt                                              <  1:444493/149‑1 (MQ=255)
                                                                                                      cGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTc                                           >  1:192507/1‑148 (MQ=255)
                                                                                                      cGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTc                                           <  8:141133/148‑1 (MQ=255)
                                                                                                       gACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCg                                                            <  8:351846/130‑1 (MQ=17)
                                                                                                       gACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCg                                                            >  7:351846/1‑130 (MQ=17)
                                                                                                       gACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTcc                                          >  6:116895/1‑148 (MQ=255)
                                                                                                       gACCCCGGCTCAGACCACGATCAACGACTAGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCACCTCCGTAACCGAATGCGGCCTTATCACTTACACCGTGACCAAGAGCAACCCTGCCCAGACGCCGCTAACCCTGACCCTTTcc                                          >  2:345751/1‑148 (MQ=11)
                                                                                                           ccGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACgg                                     <  3:58433/149‑1 (MQ=39)
                                                                                                            cGGCTCAGACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGc                                    >  7:52843/1‑149 (MQ=37)
                                                                                                               cTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGc                                    >  2:193467/1‑146 (MQ=39)
                                                                                                               cTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGc                                    <  1:193467/146‑1 (MQ=39)
                                                                                                                  aGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCCGTAACCGTGAACCTGTCCAACGGCCAAAc                               >  5:80248/1‑148 (MQ=255)
                                                                                                                   gACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGa                                                  >  3:244631/1‑128 (MQ=25)
                                                                                                                   gACCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGa                                                  <  4:244631/128‑1 (MQ=25)
                                                                                                                    aCCACGATCAACGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGAt                            <  6:166466/149‑1 (MQ=255)
                                                                                                                    aCCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGAt                            <  7:356694/149‑1 (MQ=39)
                                                                                                                      cACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCt                                                                                  <  1:268014/93‑1 (MQ=33)
                                                                                                                          aTCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGt                      <  7:284809/149‑1 (MQ=39)
                                                                                                                             aaCGACTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTg                    >  2:114004/1‑148 (MQ=255)
                                                                                                                             aaCGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTg                    <  3:217143/148‑1 (MQ=39)
                                                                                                                                 aCTCGGTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCg               >  1:397804/1‑149 (MQ=255)
                                                                                                                                   tCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCggg             <  7:85832/149‑1 (MQ=39)
                                                                                                                                     ggTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGt            <  1:261587/148‑1 (MQ=255)
                                                                                                                                      gTCGACACCACTACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTa           >  2:151906/1‑148 (MQ=255)
                                                                                                                                       tCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGc                >  4:343121/1‑142 (MQ=39)
                                                                                                                                       tCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGc                <  3:343121/142‑1 (MQ=39)
                                                                                                                                         gACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAAc       >  4:336933/1‑149 (MQ=39)
                                                                                                                                           caccactacCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAAccc     <  8:52843/149‑1 (MQ=255)
                                                                                                                                           caccactacCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAAccc     <  1:114004/149‑1 (MQ=255)
                                                                                                                                           caccactacCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAAcc      >  7:425874/1‑148 (MQ=255)
                                                                                                                                           caccaccacCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGt                                            >  1:422796/1‑110 (MQ=255)
                                                                                                                                           caccaccacCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTaaaa        <  6:32461/146‑1 (MQ=39)
                                                                                                                                             ccactaccGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAg   <  2:192507/149‑1 (MQ=255)
                                                                                                                                              cactaccGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAgg  >  7:126590/1‑149 (MQ=255)
                                                                                                                                              caccaccTCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAgg  <  7:76540/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
ATTTCCAGACCCCGGCCAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCGAGAACGCCACCGGCGGTAATTTCGAGCAACTGACCCCGAATCCGACCCCGGCTCAGACCACGATCAACGACTCGGTCGACACCACCACCGCG‑ACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACTTACACCGTGACCCTGAGCAACCCTGCCCAGACGCCGGTAACCGTGAACCTGTCCAACGGCCAAACGATTACCGTTGAAGCGGGTAAAACCCAGG  >  NC_002947/195489‑195779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑