New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2301453 = | 0 (0.000) | 108 (1.620) | 64/274 | 0.1 | 100% | intergenic (‑97/‑234) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
? | NC_002947 | 2925429 = | NA (NA) | intergenic (‑177/+388) | PP_2563/PP_2564 | antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase |
TGGCTGGTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCC > NC_002947/2925284‑2925570 | tggctggTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑Ca > 2:278354/1‑149 (MQ=255) gctggTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CAcc > 2:79866/1‑149 (MQ=255) tggTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTATCGGTTGTTCCAT‑GGGAGAT‑CACCCa > 6:296793/1‑149 (MQ=255) acaACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CGCCCAGcccgg > 5:9410/1‑146 (MQ=255) acaACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTc > 4:209667/1‑149 (MQ=255) caACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTcc < 6:418821/149‑1 (MQ=255) aaCGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCg < 5:166259/149‑1 (MQ=255) gCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGc > 3:338955/1‑149 (MQ=255) ggctggctGATGGCGCCAATATTTGAAGGCTGCGTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTc < 4:298960/149‑1 (MQ=255) ggctggctGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTc > 1:391559/1‑149 (MQ=255) gctggctgATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCg < 7:27340/149‑1 (MQ=255) gctgATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTTCGGGCTGCGCTGTCGcaca < 2:124835/149‑1 (MQ=255) gctgATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGcaca < 6:40025/149‑1 (MQ=255) tgATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAg > 3:332555/1‑148 (MQ=255) tGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATCGGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCaa < 1:79866/149‑1 (MQ=255) gcgcCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCaaa > 3:352867/1‑147 (MQ=255) gcCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAg > 2:318899/1‑148 (MQ=255) gcCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAg > 7:273078/1‑148 (MQ=255) cAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGTCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGTAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGAt < 1:257383/149‑1 (MQ=255) cAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGATTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGAt < 7:219400/149‑1 (MQ=255) aaTATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATg > 7:248545/1‑149 (MQ=255) atatTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATgc < 7:251335/149‑1 (MQ=255) tttGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGATGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCa > 5:409247/1‑149 (MQ=255) atgCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACTGGTTAGCGGTTGTTCCAT‑GGGAGATCCACCCAGCCCTTCCTGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGAc < 1:318899/147‑1 (MQ=255) gacTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTACCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGt > 4:184537/3‑149 (MQ=255) gCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTc < 4:338955/149‑1 (MQ=255) cTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCa < 4:332555/149‑1 (MQ=255) cGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCa < 8:273078/149‑1 (MQ=255) gATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCAc < 5:296793/149‑1 (MQ=255) gCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCga > 6:103176/1‑149 (MQ=255) gTCCAGGGCCGCAAGCGTGCCCCCAAAAAACCCTGCTAACCCGACGGGATAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCAGGGCTGCGCAGTCGGACAGCAAACAGGATGCGCATGACGTCACTGCTGGACTGACATGGAGAtg > 2:374035/1‑148 (MQ=25) aGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAg > 2:313315/1‑148 (MQ=255) gggCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGaa < 3:209667/149‑1 (MQ=255) cGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGc < 1:278354/149‑1 (MQ=255) cccATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACt > 6:355077/1‑148 (MQ=255) cATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGAt > 8:51298/1‑149 (MQ=255) aTAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATc > 8:88075/1‑149 (MQ=255) tAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATcc > 6:335003/1‑149 (MQ=255) aaaaCCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCg > 2:64379/1‑149 (MQ=255) aaaCCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCgg < 5:335003/149‑1 (MQ=255) aaCCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGaaaa < 4:103573/128‑1 (MQ=255) aaCCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGaaaa > 3:103573/1‑128 (MQ=255) caaccgCTAACCCGTCGGGTTAGCAGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCggg > 4:391156/6‑148 (MQ=255) tAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAg > 8:211276/1‑149 (MQ=255) aaCCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAgc < 4:352867/149‑1 (MQ=255) aCCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAgcc < 7:51298/149‑1 (MQ=255) gACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGcc > 2:398094/1‑123 (MQ=255) gACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGcc < 1:398094/123‑1 (MQ=255) gggTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAAt < 7:211276/149‑1 (MQ=255) ggTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAAt < 6:409247/148‑1 (MQ=255) gTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATAc > 2:148457/1‑149 (MQ=255) aGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTc > 5:273846/1‑112 (MQ=255) aGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTc < 6:273846/112‑1 (MQ=255) gcagttgttCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACttt < 3:391156/145‑1 (MQ=38) ttgttCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTAt < 5:355077/149‑1 (MQ=37) ccAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTc > 4:344707/1‑149 (MQ=33) aT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTccc < 3:184537/149‑1 (MQ=32) | TGGCTGGTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCAT‑GGGAGAT‑CACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATGCGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCCC > NC_002947/2925284‑2925570 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |