Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 4,732,885 | 0 | G | A | 58.4% | 40.4 / 80.1 | 78 | A917V (GCT→GTT) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
Reads supporting (aligned to +/- strand): ref base G (16/16); new base A (22/23); total (39/39) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
GGGGCTTTGATCTCGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGGTGTAAGGGGCGA > NC_002947/4732738‑4733032 | ggggCTTTGATCTCGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAg < 3:298493/148‑1 (MQ=255) ggggCTTTGATCTCGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGc > 2:378803/1‑149 (MQ=255) tgCTTTGATCTCGATAGCCATTATCTGTGTTTCCTTAAATTCTGTATCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTATCCACAGGCTGGCGCGGCAGAAACGt < 7:325900/148‑1 (MQ=255) gCTTTGATCTCGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTc < 2:415226/149‑1 (MQ=255) gATCTCGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGa < 3:369826/148‑1 (MQ=255) aTCTCGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGAcc > 4:224124/1‑149 (MQ=255) gATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCg < 2:114732/145‑1 (MQ=255) cATTATCTGTGTTTCCTTAAATTAGGGTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTGCTGCTGTTCGGCGTGCTTGGAAGCGTAACCCCAGGCTGGCGCGGGAGGACCGGCGCGCGCGGCGGATTc > 8:160448/1‑147 (MQ=255) aTTATCTGTGGTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAg < 4:22747/149‑1 (MQ=255) tCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGAc < 3:183188/148‑1 (MQ=255) tgtTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTg > 6:28310/1‑149 (MQ=255) tttCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGcc > 1:95118/1‑149 (MQ=255) ttAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCttgtt > 1:156172/1‑149 (MQ=255) ttAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCttgtt > 3:362723/1‑149 (MQ=255) aaaTTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTtgttgt > 6:351255/1‑149 (MQ=255) aaaTTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCttgtt < 2:95118/147‑1 (MQ=255) aaTTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTtgtg > 1:15434/1‑149 (MQ=255) aaTTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTtgttgt < 6:195563/148‑1 (MQ=255) aaTTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTtgttgt < 2:156172/148‑1 (MQ=255) aTTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTgg < 4:362723/149‑1 (MQ=255) ttCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCCGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTtgtg > 5:278376/1‑147 (MQ=255) tttCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGcc > 6:318308/1‑148 (MQ=255) tttCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGcc > 4:5085/1‑148 (MQ=255) cAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAg < 7:340071/148‑1 (MQ=255) gggTGCTCGAAGGCGTTAGACAGTTAAGGCGTCTTGCAGCTGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGAGCAGTGCCTTGTTGTGGCGGCCCAgg < 3:262721/147‑1 (MQ=255) aGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGa < 5:28310/149‑1 (MQ=255) ggTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGGCTTGGCGGCCCAGGa > 1:143571/1‑148 (MQ=255) gTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATa > 7:196379/1‑149 (MQ=255) ctGCGCGAACTCGTTAGACAGTGAAGGCGTCTTGCCGCAGTATTTCCTGCTGTTCGGCGTGCTTCGAAGAGTAACCACAGGCTGGCGCGGCAGAAGCGTAGCGACCGGCGTATTACAGGACCAGTGACTAGTAGAGGCGGCACAgtgtc > 4:251627/2‑145 (MQ=255) gcgAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGgc > 5:67874/1‑149 (MQ=255) cGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCAtgtg < 8:196379/149‑1 (MQ=255) gTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCCGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATgtgg < 6:278376/149‑1 (MQ=255) gACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTgct < 2:183736/149‑1 (MQ=255) aaGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTgctggctg < 5:189194/147‑1 (MQ=255) aaGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTgctggctg > 6:189194/1‑147 (MQ=255) aGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGctgctg > 3:311256/1‑149 (MQ=255) gCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTa < 2:15434/149‑1 (MQ=255) gTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTAc > 3:170505/1‑148 (MQ=255) tCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCa < 5:318308/149‑1 (MQ=255) gcagcaGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGgcg > 1:378000/1‑149 (MQ=255) gcagcaGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTc > 1:245232/1‑67 (MQ=255) gcagcaGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTc < 2:245232/67‑1 (MQ=255) gcagcaGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGgc < 6:67874/148‑1 (MQ=255) agcagTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGcc > 1:240845/1‑149 (MQ=255) gTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGcc > 3:41365/1‑145 (MQ=255) gTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGcc < 4:41365/145‑1 (MQ=255) gTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTgg > 2:204910/1‑149 (MQ=255) ccTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATa < 7:146230/104‑1 (MQ=255) ccTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATa > 8:146230/1‑104 (MQ=255) ctgctgTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCg < 3:224124/149‑1 (MQ=255) ctgTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCgg < 1:378803/147‑1 (MQ=255) cGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTc < 4:311256/148‑1 (MQ=255) cGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTc < 1:195154/148‑1 (MQ=255) cGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTc < 2:240845/148‑1 (MQ=255) gTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGGCGCCTGGTACa < 8:271468/134‑1 (MQ=255) gTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGGCGCCTGGTACa > 7:271468/1‑134 (MQ=255) ttCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCAt > 4:136656/1‑131 (MQ=255) ttCGAAGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCAt < 3:136656/131‑1 (MQ=255) cGAAGCGTAACAACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCCTATTCCAGGACCAGTGCCTTCTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGa > 2:221534/1‑149 (MQ=255) aaGCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCAGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGAcc > 8:365301/1‑149 (MQ=255) aGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCg > 3:367102/1‑149 (MQ=255) gCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCg > 2:388578/1‑148 (MQ=255) gCGTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGc < 3:5085/149‑1 (MQ=255) gTAACCACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCAt > 1:269813/1‑149 (MQ=255) ccACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCtt > 4:183064/1‑149 (MQ=255) ccACAGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCtt > 1:315418/1‑149 (MQ=255) cacaGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGaca < 5:56437/133‑1 (MQ=255) cacaGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGaca > 6:56437/1‑133 (MQ=255) cacaGGCTCGCGCGGCAGAAACGTCGCGACGGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCgg < 7:254320/121‑1 (MQ=255) acaGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCtt > 5:415294/1‑147 (MQ=255) caGGCTGGCGCGGCAGAAACGTCGCGACCAGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAg < 7:365301/149‑1 (MQ=255) aGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCt < 3:127713/126‑1 (MQ=255) aGGCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCt > 4:127713/1‑126 (MQ=255) gCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATATGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATc < 1:86428/114‑1 (MQ=255) gCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATc > 2:86428/1‑114 (MQ=255) gcgcGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGgtg > 7:3588/1‑149 (MQ=255) cgGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCA‑ACCTCAAGCATGCGGTCTGgtgtca < 2:143571/149‑3 (MQ=255) ggCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGGTGTAAg < 4:367102/149‑1 (MQ=255) aGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGGTGTAAGGGGCGa < 2:378000/149‑1 (MQ=255) | GGGGCTTTGATCTCGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAGGCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGGTGTAAGGGGCGA > NC_002947/4732738‑4733032 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |