| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 3,845,705 | +G | intergenic (‑72/+26) | PP_3394 ← / ← PP_3395 | 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,845,703 | 1 | . | G | 93.2% | 184.0 / 7.1 | 60 | intergenic (‑70/+28) | PP_3394/PP_3395 | 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (1/3); new base G (36/19); total (37/23) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
TGGCTGCTGTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GC‑‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCACCAAGCGCC > NC_002947/3845555‑3845845 | tGGCTGCTGTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTc‑gc > 3:276264/1‑149 (MQ=255) gctgctGTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTc‑gc‑‑g < 4:276264/148‑1 (MQ=255) ctgctgTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GC‑‑ggg > 1:324991/1‑148 (MQ=255) ctgctgTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GC‑‑ggg > 1:380060/1‑148 (MQ=255) cATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATc > 7:170357/1‑149 (MQ=255) aTCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGt > 4:268801/1‑147 (MQ=255) aTCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCa < 1:139764/149‑1 (MQ=255) cACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGc > 6:398247/1‑149 (MQ=255) aCTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGc > 7:365124/1‑148 (MQ=255) ttGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCAc > 3:101909/1‑149 (MQ=255) gCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCAc < 4:400708/147‑1 (MQ=255) gCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACg < 3:268801/148‑1 (MQ=255) gCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGa > 5:14043/1‑149 (MQ=255) gCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GC‑‑gg < 5:117155/127‑1 (MQ=255) gCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GC‑‑gg > 6:117155/1‑127 (MQ=255) cAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGa < 3:208978/148‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCAGGG‑CTGATCCATCGTCAGCCACGATgg < 1:238082/149‑1 (MQ=255) ctctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGAt < 5:207394/149‑1 (MQ=255) tctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGAt > 7:304867/1‑148 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑g > 6:425916/1‑149 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTATTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑g > 1:51131/1‑149 (MQ=255) tCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTGGCTGACGATGGATCa < 3:124303/139‑1 (MQ=38) tCGCGCAGGCCGACTTCATTGATTGTTAATGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTGGCTGACGATGGATCa > 4:124303/1‑139 (MQ=38) cATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTg > 3:256458/1‑146 (MQ=255) ttgattgTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTggtgga > 1:368183/1‑144 (MQ=255) tgattgTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACg > 4:121476/1‑147 (MQ=255) ttgttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGAGTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACgcagc > 7:135316/1‑148 (MQ=255) gttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCaa < 8:304867/148‑1 (MQ=255) ttgtCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTTATCCATCGTCAGCCACGATGGTTCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAggtggt > 3:33510/1‑149 (MQ=255) tCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGCTCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAg > 1:65689/1‑147 (MQ=255) tCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCa > 8:223631/1‑145 (MQ=255) tCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCa < 7:223631/145‑1 (MQ=255) tCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCa < 7:302379/149‑1 (MQ=255) gcgGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAgg > 8:180934/1‑149 (MQ=255) tctgtctgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagc > 2:39429/1‑149 (MQ=255) gtctgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagccga > 5:315223/1‑149 (MQ=255) tgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAg > 5:181367/1‑149 (MQ=255) aaGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCaa > 7:249537/1‑128 (MQ=255) aaGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCgccgagccga > 3:90169/1‑144 (MQ=255) aaGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCg > 1:240358/1‑149 (MQ=255) aaGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GC‑‑GGCCTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGc > 3:372616/1‑102 (MQ=255) aaGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GC‑‑GGCCTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGc < 4:372616/102‑1 (MQ=255) aaGCGTTGCCCAATACTAAGTGCTGTATGAGGGGCATAAAACACGTTTTTCGGG‑‑GG‑CTTAGCCTTCGTCTGCCACTATGCATCT‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACa < 2:93568/146‑1 (MQ=255) gCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGc > 7:157002/1‑146 (MQ=255) cGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CAGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAgg > 3:60683/1‑130 (MQ=255) gTTGCGCACTACTAAGCGGTGCTTGAGGGGCATAAAATACGTGTTTC‑GCG‑GG‑GTTATCCATCGTCAGCAACTATGTATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGagag < 2:368183/149‑1 (MQ=255) gcgcCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGAACCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCgt > 1:328521/1‑149 (MQ=255) gcgcAACACAAAGAGCTGGATTCCGGGCATAAAAGCGGTTTTTC‑GCG‑GG‑CTTATCCATCGTCAGCCACTTTGTATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCgt < 4:101909/149‑1 (MQ=255) aGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATAGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGcc > 1:382585/1‑149 (MQ=255) gACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCg > 5:231953/1‑149 (MQ=255) tAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTc > 7:355333/1‑149 (MQ=255) tttgtGGTTGACGGGCATAAAATACGTGTTTCGGG‑‑GG‑CTTATCCATCGTCATCCACGTTGGTTCATGCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTcgc < 2:51131/145‑1 (MQ=255) gCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCgcgc < 6:315223/148‑1 (MQ=255) gCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCgcgc < 3:121476/148‑1 (MQ=255) gCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCa > 3:339555/1‑149 (MQ=255) gCTGGATGACGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCa > 7:385819/1‑149 (MQ=255) aCGGGCATAAACGACTTGTTTC‑GCG‑GG‑ATGATCCTTGGTCAGCCAGGTGGGATCT‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGAt < 8:385819/148‑1 (MQ=255) aCGGGCAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGAt < 4:339555/148‑1 (MQ=255) cAGAAAAGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCGGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGaa > 5:366846/1‑149 (MQ=255) aaaaGACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAAtt > 7:217747/1‑148 (MQ=255) atgACGTGTTTC‑GCG‑GG‑GTTATCCATGGTCAGCCACTATGTATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCAc < 6:231953/147‑1 (MQ=255) gACGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCACCa < 6:181367/149‑1 (MQ=255) aCGTGTTTC‑GCG‑GG‑CTTATCCTTCGTAAGCCAGGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCACCa < 6:366846/148‑1 (MQ=255) cGTGTTTC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCACCaa < 2:328521/148‑1 (MQ=255) gtgtTTC‑GCG‑GG‑CAGATCCAAAGTCAGCACCCATGGATCA‑ACCCGCCCCCATCCAGGCCGGTGAACGCAACAACAGGTGGTCAAGCACGCGCCGAGCCGACAGCGAGAGCGTGTGACCGTAGCGCAAGCAGATGACGCATTCACCAAgc > 2:2335/1‑149 (MQ=255) tttC‑GCG‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCACCAAGCGcc > 5:418996/1‑149 (MQ=255) | TGGCTGCTGTCGGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGACGTGTTTC‑GC‑‑GG‑CTGATCCATCGTCAGCCACGATGGATCA‑GCCCGCGCCCTGCCAGGCCGGTGCACGCAGCAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCACCAAGCGCC > NC_002947/3845555‑3845845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |