| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,070,248 | +GA | intergenic (+48/+94) | aroP‑I → / ← PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,070,246 | 1 | . | G | 86.9% | 183.7 / 22.6 | 61 | intergenic (+46/+96) | aroP‑I/PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| Reads supporting (aligned to +/- strand): ref base . (4/4); new base G (21/32); total (25/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| * | NC_002947 | 1,070,246 | 2 | . | A | 86.9% | 179.6 / 23.0 | 61 | intergenic (+46/+96) | aroP‑I/PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger‑like protein |
| Reads supporting (aligned to +/- strand): ref base . (4/4); new base A (21/32); total (25/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGT‑‑GATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGCAAC > NC_002947/1070098‑1070384 || ccTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCtgt < 4:39526/149‑1 (MQ=255)ccTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCtgt > 6:162149/1‑149 (MQ=255) aCGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGT‑‑Ga < 1:373302/147‑1 (MQ=255) gccgccGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGT‑‑Gagatc < 1:325579/149‑5 (MQ=255) ccgccgATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGT‑‑Gagatc > 6:110201/1‑144 (MQ=255) cgccgATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGT‑‑Gagatc > 7:167970/1‑143 (MQ=255) cgccgATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGT‑‑Gagatc > 8:333407/1‑143 (MQ=255) gccgATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGT‑‑Gagatcgag < 7:333407/149‑8 (MQ=255) aTTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGcgcc < 6:60044/149‑1 (MQ=255) gCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCc‑‑gcgc > 5:160875/1‑149 (MQ=255) cATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCc‑‑gcgcg < 3:100229/149‑1 (MQ=255) aTCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCgcgg < 7:173639/149‑1 (MQ=255) cGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCgcggg‑cgg > 4:112879/1‑149 (MQ=255) aTGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCGGATCGGGTTTGTGCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCCCGCG‑CGGCGCt < 5:217790/148‑1 (MQ=38) tGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCg < 3:355752/149‑1 (MQ=255) gCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGa > 2:358194/1‑149 (MQ=255) gCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGa > 7:62500/1‑149 (MQ=255) cTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCATC‑GCCTGTGAGATCGAGCGCC‑‑GCCCGCG‑CGGCGCTCGa < 6:24120/148‑1 (MQ=37) tGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGAtc > 3:140317/1‑149 (MQ=255) aTCCCGGCATGGATCGCTGTGCTGTGGCTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGAtct < 2:265693/148‑1 (MQ=255) cGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGT‑‑Gagatc < 2:418331/117‑5 (MQ=255) cGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGT‑‑Gagatc > 1:418331/1‑113 (MQ=255) ggCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAgg < 5:227805/149‑1 (MQ=255) gCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGc < 5:293344/149‑1 (MQ=255) aTGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGa > 7:19658/1‑149 (MQ=255) tCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGGTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGaaa < 5:110201/149‑1 (MQ=255) cGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAg > 7:182492/1‑149 (MQ=255) gctgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGAGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTa > 4:185056/1‑147 (MQ=255) tgtgGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAgg > 7:14423/1‑149 (MQ=255) gggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCAt > 8:299052/1‑149 (MQ=255) ggtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCAt < 8:19658/148‑1 (MQ=255) gtggCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGc < 8:46647/149‑1 (MQ=255) tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCc‑‑gcgcg < 6:405092/101‑1 (MQ=255) tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCc‑‑gcgcg > 5:405092/1‑101 (MQ=255) tttCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTg > 7:213646/1‑149 (MQ=255) aaGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTggcgg < 8:182492/149‑1 (MQ=255) aGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTggcggc < 2:113070/149‑1 (MQ=255) gCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGaaa > 2:309322/1‑124 (MQ=255) gCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGaaa < 1:309322/124‑1 (MQ=255) aagaagGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGAGCGAGCGCC‑‑GCGCGGGCCTGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCt < 1:327227/148‑1 (MQ=255) ggCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGc > 7:244081/1‑125 (MQ=255) ggCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGc < 8:244081/125‑1 (MQ=255) ggCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGAGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGt < 3:185056/149‑1 (MQ=255) cTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTc < 8:167970/149‑1 (MQ=255) cGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTccc < 4:280142/149‑1 (MQ=255) gCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTcccc < 7:299052/149‑1 (MQ=255) gCCAAGGGCTGATCGGGTTTGTTCGTAAGGTGTATGCCGTTAGGGTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTCTTCAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTcc < 1:116581/149‑1 (MQ=38) ccAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCAt > 3:413461/1‑149 (MQ=255) ccAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCAt > 3:119189/1‑149 (MQ=255) cAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATg < 6:160875/149‑1 (MQ=255) tCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAt < 4:119189/148‑1 (MQ=255) gggTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAtgct < 4:377321/149‑1 (MQ=255) gggTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAtgct > 3:377321/1‑149 (MQ=255) gggTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAtgct > 3:352306/1‑149 (MQ=255) gTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAAtgctgc > 7:386749/1‑149 (MQ=255) tAAGGGGTATGCCGTTAGGTTTTCGGCAGCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGcc > 1:10926/1‑148 (MQ=38) gTATGCCGGTAGGTTTTCGGC‑GCCTGTGAGATCGAGCCCCTTGCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgcac < 1:358194/149‑1 (MQ=38) tGCCGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAgcacgcac < 8:14423/148‑1 (MQ=255) cGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGccc > 6:44662/1‑117 (MQ=255) cGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGccc < 5:44662/117‑1 (MQ=255) cGTTAGGTTTTCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAgtg < 8:62500/149‑1 (MQ=255) ttttCGGC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACa < 3:112879/149‑1 (MQ=255) ggC‑GCCTGTGAGATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGCAac < 5:162149/149‑1 (MQ=255) || CCTGACGCCGCCGATTCGCATCTCGGTAATGCTGATCCCGGCATGGATCGCTGTGCTGTGGGTGGCTTTCAAGCTGAAGAAGGCTCGCCAGGCCAAGGGCTGATCGGGTTTGTTCGTAAGGGGTATGCCGTTAGGTTTTCGGC‑GCCTGT‑‑GATCGAGCGCC‑‑GCGCGGG‑CGGCGCTCGATCTC‑ACAGGCGATGAAAGCCTAAAGGCATGCGTCTGGCGGCCCTGACGCGTTCCCCTTCCATGCCCCTCAATGCTGCCTCCGCCAAGCACGCACAGTGGTGTACAGCAAC > NC_002947/1070098‑1070384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |