Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	NC_002947	4,980,585	+GGC	intergenic (‑24/+44)	PP_4387 ← / ← flgE	hypothetical protein/flagellar hook protein FlgE

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4980585	0 (0.000)	86 (1.190) +GGC	70/272	0.1	100%	intergenic (‑24/+44)	PP_4387/flgE	hypothetical protein/flagellar hook protein FlgE
	?	NC_002947	4980586 =	0 (0.000)					intergenic (‑25/+43)	PP_4387/flgE	hypothetical protein/flagellar hook protein FlgE

CGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCATTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4980442‑4980585 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGGTTTACCAGCTCGCC  >  NC_002947/4980586‑4980733                                                                                                                                                  |||                                                                                                                                                      CGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCATTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCG                                                                                                                                                     >  6:256782/1‑149                GCCGGTGACCAGGCTTTGCCATTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAAT                                                                                                                                      <  6:90663/149‑1                    gttACCAGGCTTTGCCATTGATATAACGGGGCGGGGGCTGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACA                                                                                                                                  <  4:386256/146‑1                    GTGACCAGGCTTTGCCATTGATAGAACGGGGCGGGGCCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACA                                                                                                                                  <  1:390413/149‑1                       ACCAGGCTTTGCCATTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAA                                                                                                                                >  2:381975/1‑148                       ACCAGGCTTTGCCATTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAA                                                                                                                                <  6:54951/148‑1                         CAGGCTTTGCCATTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑C                                                                                                                            >  1:106651/1‑149                                  tgctttcTAGAACGTGTGGGTGGCAGCGTGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGATCCTTCACATTCTTTGGGCAGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCA                                                                                                                    <  4:310308/141‑1                                   CATTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAAGGGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAA                                                                                                                   >  1:111477/1‑149                                   CATTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAAT                                                                                                                  <  3:130597/149‑1                                    ATTGATAGACCGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATA                                                                                                                 <  2:96816/149‑1                                    ATTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAAT                                                                                                                  >  1:404861/1‑148                                    ATTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAAT                                                                                                                  >  4:245503/1‑148                                     TTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATA                                                                                                                 >  4:273316/1‑148                                        ATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAAT                                                                                                             >  8:214676/1‑149                                         TAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATC                                                                                                            <  2:404861/149‑1                                          AGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCA                                                                                                           >  5:232382/1‑149                                           GAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCA                                                                                                           >  8:295406/1‑148                                           GAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCA                                                                                                                    >  3:310308/1‑139                                             ACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCAT                                                                                                          >  6:283080/1‑147                                                GGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGT                                                                                                     <  8:389796/149‑1                                                   CGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCACTACAATCATCAGGTCAT                                                                                                  <  5:256782/149‑1                                                   CGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCAT                                                                                                  >  2:358187/1‑149                                                      GGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCT                                                                                                >  8:369498/1‑148                                                          AGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATG                                                                                           <  5:283080/149‑1                                                            CGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGAT                                                                                         <  6:232382/149‑1                                                             GGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATG                                                                                        <  7:405798/149‑1                                                                   AGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGGCCCAAATACAAACA‑CCAAAGCCAAAACAATCAAAACGTCATCTGAATGATGGTCTG                                                                                   >  6:253954/1‑148                                                                   AGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCAT                                                                                                          >  5:270914/1‑125                                                                   AGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCAT                                                                                                          <  6:270914/125‑1                                                                     GCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCAT                                                                                >  2:268818/1‑149                                                                       AGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGA                                                                              >  3:152084/1‑149                                                                         AACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATG                                                                            <  7:295406/149‑1                                                                            CAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGGGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCAACAGGTCAACGGAATGTTGGTCTGCTTGATGGTG                                                                         >  6:431244/1‑149                                                                            CAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTG                                                                         >  3:136511/1‑149                                                                              GCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCTAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCT                                                                       >  8:157853/1‑149                                                                              GCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCT                                                                       >  4:204769/1‑149                                                                               CACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGAGAACCTTTACAATCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGGCATATGAATGAAGGTCTGCATGATGGTGCTT                                                                      >  1:311709/1‑149                                                                                ACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTT                                                                     <  5:253954/149‑1                                                                                  CAGCAA‑GGGCAAAAAGGCCAGTAACGACAGCAGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCA                                                                   <  5:106060/149‑1                                                                                    GCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGT                                                                 <  3:273316/149‑1                                                                                     CAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTG                                                                <  3:245503/149‑1                                                                                         GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGA                                                              >  4:45523/1‑148                                                                                         GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGA                                                              >  8:109305/1‑148                                                                                          GGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAA                                                            >  1:32087/1‑149                                                                                            GAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATG                                                          >  5:377303/1‑149                                                                                                  GGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTG                                                    <  1:23575/149‑1                                                                                                     CAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCGTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCA                                                 >  1:415216/1‑149                                                                                                      AGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCAT                                                >  5:253658/1‑149                                                                                                        TAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCTAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTG                                              <  7:157853/149‑1                                                                                                         AACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCATTCAGTGGAAATGGTCTTGGCATTGG                                             >  4:309144/1‑149                                                                                                          ACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGC                                            <  1:381975/149‑1                                                                                                            GACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCT                                          >  8:394337/1‑149                                                                                                             ACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTTATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTG                                         >  8:50645/1‑149                                                                                                              CAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGG                                        <  7:394337/149‑1                                                                                                              CAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGG                                        <  2:106651/149‑1                                                                                                                GCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTA                                      <  6:104433/149‑1                                                                                                                GCCGCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTA                                      <  6:377303/149‑1                                                                                                                   GCTTCATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTT                                   <  3:204769/149‑1                                                                                                                        ATTCGCGTGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCT                              <  7:214676/149‑1                                                                                                                               TGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTT                                   <  7:330131/137‑1                                                                                                                               TGAACCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTT                                   >  8:330131/1‑137                                                                                                                                   CCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATC                   <  7:369498/149‑1                                                                                                                                   CCTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATC                   <  1:243646/149‑1                                                                                                                                    CTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCA                  <  2:32087/149‑1                                                                                                                                    CTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGAT                    >  3:232560/1‑147                                                                                                                                    CTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATG                                                                            <  4:426935/91‑1                                                                                                                                    CTTCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATG                                                                            >  3:426935/1‑91                                                                                                                                      TCACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGG                >  7:109833/1‑149                                                                                                                                       CACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGG                <  4:152084/148‑1                                                                                                                                       CACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAG                 <  6:253658/147‑1                                                                                                                                       CACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTT                       <  4:342327/141‑1                                                                                                                                       CACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTT                       >  3:342327/1‑141                                                                                                                                        ACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACATCCTAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGG                <  1:358187/148‑1                                                                                                                                        ACATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGGT               <  3:309144/148‑1                                                                                                                                         CATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGGTTT             <  4:136511/149‑1                                                                                                                                         CATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGGTT              >  6:399332/1‑148                                                                                                                                          ATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCT                                >  7:75843/1‑129                                                                                                                                          ATTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCT                                <  8:75843/129‑1                                                                                                                                           TTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGGTTTAC           <  1:268818/149‑1                                                                                                                                           TTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGGTTTA            >  8:248305/1‑148                                                                                                                                           TTCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATCGTCTTGGCATTGGCCTGGTAGTTGCTCTCCGCCTTGATCAGGTTTAg           >  8:241941/1‑148                                                                                                                                            TCTTGGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGGGCGTTGATCAGGTTTAC           >  5:93086/1‑148                                                                                                                                                GGGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGGTTTACCAGCT      >  7:37771/1‑149                                                                                                                                                 GGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATC                                                                                                            >  1:373814/1‑46                                                                                                                                                 GGGCCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATC                                                                                                            <  2:373814/46‑1                                                                                                                                                    CCGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGGTTTACCAGCTCGCC  >  7:169193/1‑149                                                                                                                                                  |||                                                                                                                                                      CGAACACAGGTAGCGGCCGGTGACCAGGCTTTGCCATTGATAGAACGGGGCGGGGGCAGCGGGGGCAGGCAGAACCAGCACCAGCAA‑GGGGAACAAGGCCAGTAACGACAGCCGCTTCATTCGCGTGAACCTTCACATTCTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4980442‑4980585 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCTTTGCGGCCCCAATTACAAACA‑CCAAAGCCAATACAATCATCAGGTCATCTGAATGATGGTCTGCATGATGGTGCTTTCAGTGGAAATGGTCTTGGCATTGGCCTGGTAGTTGCTCTGCGCCTTGATCAGGTTTACCAGCTCGCC  >  NC_002947/4980586‑4980733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.