| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4808174 = | 6 (0.080) | 27 (0.490) | 19/208 | 3.2 | 53.2% | intergenic (‑283/‑272) | PP_4234/dsbD‑II | bifunctional aldehyde oxidase/xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| ? | NC_002947 | = 5988935 | 43 (0.780) | intergenic (+229/‑317) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CAATGGGCGGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAA > NC_002947/4808036‑4808320 | cAATGGGCGGAATTCGCGCTTTGGCGGGGAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTATCCGCGCCTGGGAGGTGGTCGCCGGGAGAGTTTCAGCGGCTCGGTGATCGAGCGACGCACGCGAGgcg > 6:312911/1‑149 (MQ=37) ctaaTTCGCGCTTTGGCGGGTAGGTCTTTGGCGGTAGGGTTGCTGCGCGTGGTAGGTGTTCGCCGGGGGTTTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCgcgg < 8:370221/147‑1 (MQ=25) ttCTCGCTTTGTCGGTTAGTTGTTTGGCGGTAGTTTTTCAGCGCCTGGTAGGTGTTCGCCGGTTGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCgcgggtaa < 1:309361/149‑4 (MQ=21) gcgcTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTACGCCGGGAGAGTTTCAGCGACTGGGAGATCGAGCGCCGCCCGCGAGGCGCTACgcgggtaaacc > 5:325688/1‑143 (MQ=38) cgcTTTTGCGCGTAGGTTTTGGGCGGTAGGCTTTCTGCGGCTGGTAGGTGTTCGGCGGGCGTTTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCgcgggtaaaccc < 1:177492/149‑8 (MQ=18) gtgtTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGGCTGGGAGATCGAGCGCCGCAcgcgcgg > 7:381350/1‑81 (MQ=25) gggtttacccgcGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCGCAAAATTCCAACGCCGCCTCCCCTCGATAATc > 3:397327/8‑148 (MQ=255) gtttacccgcGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCcaa < 1:22363/144‑1 (MQ=255) tacccgcGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCcaaca > 3:91576/3‑148 (MQ=255) acccgcGAAGCGCAGCGCGGGCGGCTCTCGATCTCAGAGGGGCTGAAAATGCTCCGGCAATCTCCTCTATATTCAACCCCCTTCCTCTCAAAATTCCCACGCCGACCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCcaacaa < 6:161749/147‑1 (MQ=25) | CAATGGGCGGAATTCGCGCTTTGGCGGGTAGGTGTTTGGCGGGAGGTTTTCAGCGCCTGGGAGGTGTTCGCCGGGGGATTTTCAGCGCCTGGGAGGTGTTCGCCGGGAGAGTTTCAGCGCCTGGGAGATCGAGCGCCGCCCGCGAAGCGCCGCGCGGGCGGCGCTCGATCTCACAGGCGCTGAAAATCCTCCGGCAAACACCTCAAAATTCCAACGCCGTCCACTCAAAATTCCAACGCCGCCCCCTCAAAATTCCAACGCCGCCTCCCCTCGAAAATCCAACAA > NC_002947/4808036‑4808320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |