| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_002947 | 5,555,608 | +GCC | intergenic (‑84/+87) | PP_4887 ← / ← PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5555608 | 2 (0.030) | 64 (0.890) +GCC |
52/272 | 0.5 | 97.0% | intergenic (‑84/+87) | PP_4887/PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | 5555609 = | 2 (0.030) | intergenic (‑85/+86) | PP_4887/PP_4888 | hypothetical protein/methyl‑accepting chemotaxis transducer | |||||
GTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAG‑CG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCT > NC_002947/5555465‑5555757 | tgtcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccc < 8:397521‑M2/1‑1 (MQ=255) tcactgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCg < 3:132456‑M2/3‑1 (MQ=255) actgtgcaggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaagtccttttgtcatgtgtcgccgccagcatagcgacaccgctccggtgtgggagcggccttgtgtcgcgaacgggccgcatagcggccCGGGc > 8:42167‑M2/145‑149 (MQ=255) aggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTcc > 2:48661‑M2/138‑149 (MQ=255) ggaaattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCcg < 1:398715‑M2/13‑1 (MQ=255) aattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCgt < 8:202212‑M2/16‑1 (MQ=255) aattcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttggaatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCgt < 8:196498‑M2/16‑1 (MQ=255) tcaggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTa > 3:170034‑M2/131‑149 (MQ=255) aggtcggccttggcagcgattatgcgggctgacatgagcaactgcttttgtcatgtgtcgccgacaggatagaaacaccgctctggggtgggagcgggcttgtgtggcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATg < 8:120773‑M2/21‑1 (MQ=255) aggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTAt < 4:170034‑M2/20‑1 (MQ=255) aggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTAt < 3:211744‑M2/20‑1 (MQ=255) ggtcggcctgggcagctattagtcgggctgacatgagcaattccttttgtcatttttcgcctacagcatagcaacacccctcaggtgtgggagcggccttgtgtcgataaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGc < 8:228449‑M2/22‑1 (MQ=255) ggtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGc < 4:375328‑M2/22‑1 (MQ=255) gtcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGc > 2:305348‑M2/127‑148 (MQ=255) tcggcctgggcagtgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGcaa < 6:171954‑M2/24‑1 (MQ=255) tcggcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGcaa < 3:271125‑M2/24‑1 (MQ=255) gcctgggcagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGcaaca > 6:346659‑M2/123‑148 (MQ=255) gcatcgaatagtcgggcggtaatgctgaactgcttttgtcatgtttcgccgacatcatagcaacaccgctcaggtgtgggatcggccttgtgtcgcgaaacggccgcatatcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTgg < 7:42167‑M2/33‑1 (MQ=255) cagcgattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTACGCGTGTATGCAACAAA‑CCTggg > 3:82569‑M2/116‑149 (MQ=255) gattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTAt > 8:17659‑M2/112‑131 (MQ=255) gattagtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTAt < 7:17659‑M2/20‑1 (MQ=255) gtcgggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAAATTACGCGTGGATGGAACAAA‑CCTGGGGCTGCTATg > 4:310138‑M2/107‑149 (MQ=255) gggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCa < 8:23906‑M2/45‑1 (MQ=255) ggcggacatgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtagcgaaagggccgcaaagcggccCCCGCAATTTACGCGTGTATTCAACAAA‑CCATGGGCTGCTATTCAGc > 4:362845‑M2/103‑149 (MQ=255) catgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTc < 4:50288‑M2/53‑1 (MQ=255) atgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTcg < 5:346659‑M2/54‑1 (MQ=255) atgagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTcg < 4:207645‑M2/54‑1 (MQ=255) gagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATg > 1:226417‑M2/94‑114 (MQ=255) gagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATg < 2:226417‑M2/21‑1 (MQ=255) gagcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTcgc > 4:313845‑M2/94‑148 (MQ=255) agcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGa < 3:313845‑M2/57‑1 (MQ=255) gcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGgctgct > 2:115648‑M2/92‑131 (MQ=255) gcaactccttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGgctgct < 1:115648‑M2/40‑1 (MQ=255) cttttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGc < 1:48661‑M2/65‑1 (MQ=255) ttgtcatgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGcc < 1:29635‑M2/66‑1 (MQ=255) tgtgtcgccgacagcatagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAACCCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAg < 1:305348‑M2/74‑1 (MQ=255) tCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTTTAGCCAAAAGGCCCCAAAGCCGCC‑CCCGCAAATTACCCGGGGTTTCAACAAA‑ACAGGGGGTTCGATGGAGCCCGTTAGCGCCACCACGGCCACAAAGGaacc > 8:393969/1‑146 (MQ=255) catagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCtt > 3:333446‑M2/62‑148 (MQ=255) tagcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAg < 2:51182‑M2/90‑1 (MQ=255) gcaacaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGc < 8:258474‑M2/92‑1 (MQ=255) acaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTcgc > 5:75627‑M2/55‑109 (MQ=255) acaccgctcaggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTcgc < 6:75627‑M2/55‑1 (MQ=255) cGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCCCAAAG‑CGGCCCCGGCAAATTGCGCGTGTATTGAACAAA‑ACTGGGGCAGGAAAGCCGCCCAGTCGCGACACCAAGCCCACAAAGGACCGCGCCGGCTTCCGGCCCCGAAc > 6:200955/1‑149 (MQ=12) aggtgtgggaggggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGcc < 7:52085‑M2/104‑1 (MQ=255) aggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTgg < 3:362845‑M2/102‑1 (MQ=255) aggtgtgggagcggccttgtgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCAGGGGCTGCTATGCAGCCCTTTCGCGACACACGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGcc > 4:368830‑M2/46‑149 (MQ=255) gtgtggtagaggacttgtgtcgagaaagggccgcatagcggccCCGGCAATTTCCGGGTGTATGCAACAAA‑CCTGGGGCTGCTCTGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAActgtc < 3:314425‑M2/103‑3 (MQ=255) tgtcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGa < 7:125146‑M2/123‑1 (MQ=255) tcgcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgc > 2:190245‑M2/25‑149 (MQ=255) gcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACaa < 5:379492‑M2/71‑1 (MQ=255) gcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACaa > 6:379492‑M2/23‑93 (MQ=255) gcgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgccg > 6:373910‑M2/23‑149 (MQ=255) cgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgccgc < 4:333446‑M2/128‑1 (MQ=255) cgaaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgccgc > 3:148579‑M2/22‑149 (MQ=255) aaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCa < 3:310138‑M2/130‑1 (MQ=255) aaagggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACT‑GCCCAGGCTGGCGCGCAGCTGAGCCGCCAg < 5:20674‑M2/130‑1 (MQ=255) gggccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAgccgc > 5:73135‑M2/17‑144 (MQ=255) gccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatca < 1:175208‑M2/135‑1 (MQ=255) gccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGat > 6:414064‑M2/15‑147 (MQ=255) ccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatcat > 2:79383‑M2/14‑149 (MQ=255) ccgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatcat > 7:3649‑M2/14‑149 (MQ=255) cgcatagcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGatcatc < 7:393969‑M2/137‑1 (MQ=255) agcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGgcgc > 6:383737‑M2/8‑122 (MQ=255) agcggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGgcgc < 5:383737‑M2/115‑1 (MQ=255) cggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACACGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCAcc < 3:368830‑M2/144‑1 (MQ=255) cggccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCAcc < 5:414064‑M2/144‑1 (MQ=255) ccCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTg < 1:79383‑M2/147‑1 (MQ=255) cCCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGc > 7:159383‑M2/2‑149 (MQ=255) ccGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTCTGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCt < 5:200955/149‑1 (MQ=255) | GTCACTGTGCAGGAAATTCAGGTCGGCCTGGGCAGCGATTAGTCGGGCGGACATGAGCAACTCCTTTTGTCATGTGTCGCCGACAGCATAGCAACACCGCTCAGGTGTGGGAGCGGCCTTGTGTCGCGAAAGGGCCGCATAG‑CG‑‑‑CCGGCAATTTCCGCGTGTATGCAACAAA‑CCTGGGGCTGCTATGCAGCCCTTTCGCGACACAAGGCCCACAAAGGACCGCGCAGGCTTCAGGCCCGGAACTGGCCCAGGCTGGCGCGCAGCTGAGCCGCCAGATCATCCAGCACCTTGCT > NC_002947/5555465‑5555757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |