| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 353,067 | A→G | intergenic (+34/+84) | hisF → / ← cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 353,067 | 0 | A | G | 98.5% | 220.2 / NA | 65 | intergenic (+34/+84) | hisF/cbcV | imidazole glycerol phosphate synthase subunit HisF/choline/betaine/carnitine ABC transporter ATP binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (30/34); minor base T (0/1); total (30/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑AGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCC > NC_002947/352921‑353206 | ttCTGGTAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCTTCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑Tgg < 6:255414/149‑1 (MQ=255) tCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑ggg > 7:257296/1‑148 (MQ=255) tGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCAc > 7:196271/1‑149 (MQ=255) gAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGc > 8:90231/1‑149 (MQ=255) gAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGc > 1:425760/1‑149 (MQ=255) cATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑Tc < 6:153575/149‑1 (MQ=255) cATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTGCGCTGATCCATTGCCCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑Tc < 1:314226/149‑1 (MQ=255) aGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAg < 5:402895/149‑1 (MQ=255) tGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCt < 8:92715/149‑1 (MQ=255) tGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCt < 2:359538/149‑1 (MQ=255) ggcggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTTCAGCACTTCGC‑GCGCACGCCCGA‑TCCCACAGGTTTGCTgag > 6:208843/1‑148 (MQ=255) ggcggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCt < 5:208843/145‑1 (MQ=255) ggcggcCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCt > 2:95151/1‑145 (MQ=255) ccAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATctct < 6:342670/149‑1 (MQ=255) cAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACCCCCCC‑ACCCACAGGTTTGCTTAGAtcaatg > 8:161287/1‑145 (MQ=39) cATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTgg > 5:165761/1‑149 (MQ=255) ttCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGc > 1:91199/1‑149 (MQ=255) ccACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGa < 4:154485/145‑1 (MQ=255) ccACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAg < 2:425760/146‑1 (MQ=255) cACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCgg < 1:204872/148‑1 (MQ=255) cACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCgg < 7:90231/148‑1 (MQ=255) aCTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGc < 6:350597/149‑1 (MQ=255) cGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTg > 4:255310/1‑119 (MQ=255) cGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTg < 3:255310/119‑1 (MQ=255) gAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCcgc < 8:196271/149‑1 (MQ=255) acaGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTgag < 2:287180/117‑1 (MQ=255) tGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGGTTGCGGAGATCTCTGGGGGAGCGGGCGTGCCCGCGAAGGGCcgc > 3:320673/1‑149 (MQ=255) gAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCCC‑ACCCACAGGTTTGGTGAGATAGATGTGGGAGCGGGCGTGGCCGCGAAGGGCCCCGGAGc > 8:157917/1‑149 (MQ=38) ccAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGcc < 8:257296/149‑1 (MQ=255) cAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGccc > 3:87629/1‑149 (MQ=255) cAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGccc > 1:374427/1‑149 (MQ=255) cAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑GCCCCCAGGTTTGCTGAGATGTCTGTGGGAGCGGGCGTGGCCGCGACGGGCCGCGCAGC‑GGccc > 1:386754/1‑149 (MQ=38) aacgccttACAGGGCTCCGCTCGGTATCATCGTGCGCTGAGCCATTGCCGGGGCCGGCTTGGCTGCCCTTCGC‑GGCCACGCCCGC‑TCCCACTGGTGGGCTGAGATCGCTGGGGGTGCGGGGGTGCCCGCGAAGGGCCGCGAAGC‑GGccc < 4:307056/142‑1 (MQ=255) aaGGCCTACATGGCTTCGCGCGGGATAGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGccc > 5:81739/1‑148 (MQ=255) ggCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACCCCCGC‑TCCCACAGGTTTGCTGAGATATCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCaa > 8:56474/1‑149 (MQ=255) gCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAAt > 7:24985/1‑149 (MQ=255) ccTACATGGCTTCGCGCGGGATCGGCGTTCGCTCATCCATTGCCCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTCAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAAtt < 7:157917/149‑1 (MQ=38) aCATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCgg > 2:305327/1‑111 (MQ=255) aTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCCCCCCCCCACCCCACCGGTTTG‑TGAGATATCAGTTGGAGCGGGGGTGCCCGCGAACGGCCGCGAACC‑GGCCCCCATTGcat > 4:262223/1‑146 (MQ=255) aTGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGTAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTc < 8:24985/149‑1 (MQ=255) ggCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGGCCCCAATGCTTaaa > 3:374731/1‑149 (MQ=38) ttCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑GCCCCCAGGTTTGGTGAGATCTCTGTGGGCGCGGGCGGGCCCGCGCAGGGCCGCCAAGC‑GGCCCCAAATTCTTAAACCg > 8:392867/1‑149 (MQ=37) cgcgGGATCGTCGTTCGCTGATCCATTGCCCGGGGCTGCTTTGCAGCCCTGCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGc < 6:341211/106‑1 (MQ=255) cgcgGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑AGCCCCAATTGCTTCAACCGTGGt > 1:279027/1‑149 (MQ=255) tcgtTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGag < 2:374427/149‑1 (MQ=255) tGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGcgcg > 4:285586/1‑148 (MQ=255) aTCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGcgcg < 3:285586/146‑1 (MQ=255) aTCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑AGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTg < 2:279027/148‑1 (MQ=255) tCCATTGCCGGGGGCTGCTTTGCAGCCCTGCGG‑GGCCACGCCCGC‑CCCCACTGGTTTGCTTAGATCTCTGTGGGAGCGGGGGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTgg < 6:264522/148‑1 (MQ=37) ccATTGACCGGGGCTGCTTTGCAGCCCTTCGCGGGGCAC‑CCCCC‑GCCCACAGGGTTTGTGAGAAAGGAGTGGGCGCGGGCGAGCCCCCGAAGGGGAGCGAAGCGGGCGCCATTTGGTGAAACC‑TGGGTGTTTCCGGGCCGCGCGTGGt > 8:170599/1‑148 (MQ=255) aTTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTaaa < 7:56474/149‑1 (MQ=255) aTTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCCTGGTa > 4:357939/1‑147 (MQ=255) aTTGACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCCC‑TCCCACAGGTTTGGTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCCCGAAGC‑GGCCCCCATTGCTTCAACCGTGGGTGTTGCCGAGCCGCGCGTGGTa > 3:320404/1‑147 (MQ=38) gACCGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCCC‑ACCCACAAGTTTTCTGAGATATCTGTGGGAGCGGGCGTGCCCGCGAAAGGCCGCCAAGC‑GGCCCCCAATGCTTAAAACCTGGTTATTTCCGAGCAGAGCCTGGTaaaac > 8:63042/1‑146 (MQ=25) cgggggCTGCTTTGCAGCCGTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTTCCATCTCTGTGGTAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg < 7:161287/147‑1 (MQ=38) ccGGGGCTGCTTGCCCGCCGTGCGC‑GGCCACGCCCGC‑TCCCCCCGGTTTGCTCCCATCGCTGGGGTTGCGGGGGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCg < 3:262223/149‑1 (MQ=25) cGGGGCTGCTTTGCAGCCCTTCGC‑GGGCACGCCCCC‑ACCCACAGGGTTGCGGAGATATCAGTGGGAGCGGGGGTGCCCGCGAAGGGCCGCGCAGC‑GGCCCCAAATGCGTGAACCCGTGTTGTTGCCGCGCAGCGCGGGGTAAAGCGCgg > 6:237077/1‑149 (MQ=21) gctgctTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATc < 6:81739/149‑1 (MQ=255) tgctTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGtt > 5:178665/1‑114 (MQ=255) tgctTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGtt < 6:178665/114‑1 (MQ=255) tgctTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGc > 5:326217/1‑139 (MQ=255) tgctTTGCAGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGc < 6:326217/139‑1 (MQ=255) atctccccccTTCGC‑GGGCACGCCCGC‑TCCCACCGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGa < 3:73741/142‑1 (MQ=255) aGCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGACCTCTGTGGGAGCGGGCGGGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATc < 1:145369/149‑1 (MQ=255) gCCCTTCGC‑GGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTTGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATcc < 1:95151/149‑1 (MQ=255) cccTTCGC‑GGGCACGCCCGC‑TCCCACCGGTTTGCTGAGATCTCTGTGGGAGGGGGGGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATc < 5:237077/147‑1 (MQ=255) | TTCTGGAAGGGCATGCCAGCGCGGTGCTGGCGGCCAGCATCTTCCACTTTGGCGAGTACACAGTGCCGGAGGCCAAGGCCTACATGGCTTCGCGCGGGATCGTCGTTCGCTGATCCATTGACCGGGGCTGCTTTGCAGCCCTTCGC‑AGGCACGCCCGC‑TCCCACAGGTTTGCTGAGATCTCTGTGGGAGCGGGCGTGCCCGCGAAGGGCCGCGAAGC‑GGCCCCAATTGCTTCAACCGTGGTTCTTGCCGAGCAGCGCGTGGTAAAGCTCGGTATCCCCGAGTATCC > NC_002947/352921‑353206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |