| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 278,744 | +A | intergenic (‑239/+75) | PP_0224 ← / ← sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 278,742 | 1 | . | A | 93.1% | 220.8 / 9.1 | 72 | intergenic (‑237/+77) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (0/5); new base A (33/34); total (33/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.81e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑AA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGC > NC_002947/278598‑278884 | tCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑aaac > 3:175160/1‑147 (MQ=255) gCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑AA‑accc < 4:175160/149‑2 (MQ=255) tACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑Gc > 1:15024/1‑149 (MQ=255) tACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑Gc > 1:21135/1‑149 (MQ=255) gCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTcc > 4:29069/1‑148 (MQ=255) cTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTa > 1:1391/1‑149 (MQ=255) gATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTaca > 2:28276/1‑149 (MQ=255) aTCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTacac < 1:28276/149‑1 (MQ=255) tagcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTacaca < 4:56018/147‑1 (MQ=255) tCGCGACAGACGTGTGCTGTTCCGTTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGTGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTacac < 4:285806/148‑1 (MQ=255) cgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACAt < 8:36814/149‑1 (MQ=255) cGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCaa < 2:15024/149‑1 (MQ=255) cGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCaa < 2:21135/149‑1 (MQ=255) tgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGAt < 2:73701/148‑1 (MQ=255) taccggtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATc > 6:184700/5‑149 (MQ=255) tggtccggtggtccggTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCtgt > 4:47845/1‑149 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCtgt < 2:199915/147‑1 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCtgt < 3:4598/147‑1 (MQ=255) tccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTacac > 2:211143/1‑128 (MQ=255) tccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTacac < 1:211143/128‑1 (MQ=255) ccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATTCCGCAAGATCTGTGCAc > 7:60172/1‑149 (MQ=255) cggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCAc < 6:306640/148‑1 (MQ=255) gtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCtgt < 6:302325/142‑1 (MQ=255) gtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCtgt > 5:302325/1‑142 (MQ=255) cggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTa < 3:221228/144‑1 (MQ=255) cggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTa > 4:221228/1‑144 (MQ=255) gtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg < 1:112523/149‑1 (MQ=255) tatatataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCggg < 3:29069/149‑1 (MQ=255) tatataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑ACC‑CCTCCTAAACAAATTCCGAAAAATAAGTGCAAAGTTGGAGCCGGtt > 5:37835/1‑149 (MQ=255) atataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCt > 3:167584/1‑105 (MQ=255) atataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCt < 4:167584/105‑1 (MQ=255) ataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAc > 2:299874/1‑149 (MQ=255) taCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAcc < 4:68725/149‑1 (MQ=255) taCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAc < 8:34110/148‑1 (MQ=255) taCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTACTACACACATGCCTCAAGATATGTGCACTGTAGGAGCGGGTTTAcc > 1:291458/1‑149 (MQ=255) aCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGTCTCTTAGCGGGTAAA‑CAC‑GCTCCTACAAACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAccc > 5:375407/1‑149 (MQ=255) aCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGGCGCAAGATCTGTGCACTGTAGGAGCGGGGTTAccc > 4:270162/1‑149 (MQ=255) cccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAccc < 3:47845/148‑1 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGcc > 4:94381/1‑107 (MQ=255) gATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGcc < 3:94381/107‑1 (MQ=255) tataAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCg > 6:347640/1‑149 (MQ=255) ataAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGTGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAATATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCg > 5:89471/1‑148 (MQ=255) aaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGaa > 3:186527/1‑147 (MQ=255) aaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑ACC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGaa > 1:150732/1‑147 (MQ=255) aaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGAATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTc > 4:242686/1‑100 (MQ=255) aaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGAATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTc < 3:242686/100‑1 (MQ=255) ttttATCACCAACCTTTTTTTAATTTTTATACATGGGGGATTTGTTCCAGCGGTGCCGGGCTCTTCGCGGTA‑AACCCC‑GCTCCAACACACTTCCCTCATTTTCTTTCCACTTTCGGCGGGGGTTTACCCGCGAAAGGGCCGGAACAgg < 4:186527/148‑1 (MQ=255) cctatctctaactTTTTGTAATATTTTTAGATGGGGTTTTTGTTACAGTGGTGCCGGGCTCTTCGCGGTTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTTGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGtt < 4:299724/141‑1 (MQ=255) taaataattTTTTGTAATTTTTATCGAGGGGGTTTTTTTTCCCGTGGTGCCGGGCTCTGCGGGTTA‑AACCCC‑GCTCCAACACACTTGCCTCATTATTTGTCCATTTTTGGTGGGGTTTAACCCGCGAAAGGGCCGGAACAGGTTTACt < 6:37835/144‑1 (MQ=255) aaataactTTTTGAAATATTTATCCACGGGGGATTTGTTCCAGCGGTGCCGGGCTTTTCGCGGGT‑AACCCC‑GCTCCAACACACATCCCTCACCATCTGGCCACTGTCGCCGGGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTc < 8:5745/145‑1 (MQ=255) ctaactTTTTGGAATATTTATAGAAGGGGTTTTTGTTACAGTGGTGCCGGGCTCTTCGCGGGT‑AA‑CCCGGCTCATACACACATGCCTCAAGATCTGTGCACTGTAGGAGGGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGa < 4:136831/149‑1 (MQ=255) taactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGtt > 3:299724/1‑140 (MQ=255) taactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAg > 6:91137/1‑149 (MQ=255) actTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGTGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAgg < 6:89471/148‑1 (MQ=255) ctTTTTGTATTATTTATAGACGGGGGTTTTGTTCCAGCGGTGCCGGGCTCTGCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCATTATCTGTGCACTGTAGTAGGGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGcc < 2:150732/149‑1 (MQ=255) ggAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCtgt > 5:236461/1‑87 (MQ=255) ggAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCtgt < 6:236461/87‑1 (MQ=255) gAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTcc > 7:191742/1‑149 (MQ=255) aaTATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTccc > 5:292558/1‑149 (MQ=255) tatTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGa < 2:1391/149‑1 (MQ=255) tttATACAAGGGGGATTTGTTACAGAGGGGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAg < 1:156538/148‑1 (MQ=39) ttATAGAAGGGGGATTTGTTACAGAGGGGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCgg < 6:79749/116‑1 (MQ=255) tataGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAg > 7:120189/1‑120 (MQ=255) tataGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAg < 8:120189/120‑1 (MQ=255) gAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTg < 8:191742/149‑1 (MQ=255) aaGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTgc < 3:270162/149‑1 (MQ=255) aaGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTgc > 7:83943/1‑149 (MQ=255) aaGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTgc < 5:184700/149‑1 (MQ=255) tGTTACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTg > 2:75617/1‑149 (MQ=255) ttACAGAGGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGc < 5:347640/148‑1 (MQ=255) agagGTGCCGGGCTCTTCGCGGGTAAA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgcg > 6:323926/1‑148 (MQ=255) cgcgGGTAAA‑CCC‑GCTCCTACACACATGCCTCACCATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCgg < 8:60172/147‑1 (MQ=255) gcgGGTAAA‑CCC‑GCTCCTACACACATGCCTCATGATCTGTGCACTGTAGGAGCGGGGTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGgcgc > 1:76225/1‑149 (MQ=255) | TCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCGGGCTCTTCGCGGGT‑AA‑CCC‑GCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGC > NC_002947/278598‑278884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |