| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 350502 = | 50 (0.850) | 4 (0.070) | 4/256 | NT | 7.3% | coding (548/633 nt) | hisB | imidazoleglycerol‑phosphate dehydratase |
| ? | NC_002947 | 350539 = | 53 (0.920) | coding (585/633 nt) | hisB | imidazoleglycerol‑phosphate dehydratase | |||||
AAGCGCCTTGGCCACCGAGTGCAGGTTACCCATGCCATAGTCGATTACGGCTACCGTTTGCATTTACAGGCACCCTTTGGTGGAAGGCATCTGCCCGGCCATACGCTCGTCGAGGGTGATGGCCATGCGCAGAGCGCGGCCGAAAGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/350650‑350502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctCGACGAGCGTATGGCCGGGCAGATGCCTTCCACCAAAGGGTGCCTGTAAATGCAAACGGTAGCCGTAATCGACTATGGCATGGGTAACCTGCACTCGGTGGCCAAGGCGCTTGAGCACGTAGGTGCCGGTAAAGTGCT > NC_002947/350539‑350676 AAGCGCCTTGGCCACCGAGTGCAGGTTACCCATGCCATAGTCGATTACGGCTACCGTTTGCATTTACAGGCACCCTTTGGTGGAAGGCATCTGCCCGGCCATACGCTCGTCGAGGGTGATGGCCATGCGCAGAGCGCGGCCGAAAGCCT > 5:178008/1‑149AAGCGCCTTGGCCACCGAGTGCAGGTTACCCATGCCATAGTCGATTACGGCTACCGTTTGCATTTACAGGCACCCTTTGGTGGAAGGCATCTGCCCGGCCATACGCTCGTCGAGGGTGATGGCCATGCGCAGAGCGCGGCCGAAAGC < 2:263342/147‑1 TCGTCGAGGGTGATGGCCATGCGCAGAGCGCGGCCGAAAGCCTCGACGAGCGTATGGCCGGGCAGATGCCTTCCACCAAAGGGTGCCTGTAAATGCAAACGGTAGCCGTAATCGACTATGGCATGGGTAACCTGCACTCGGTGGCCAAG > 1:330884/1‑149 TCGAGGGTGATGGCCATGCGCAGAGCGCGGCCGAAAGCCTCGACGAGCGTATGGCCGGGCAGATGCCTTCCACCAAAGGGTGCCTGTAAATGCAAACGGTAGCCGTAATCGACTATGGCATGGGTAACCTGCACTCGGTGGCCAAGGCG > 2:9239/1‑149 GGTGATGGCCATGCGCAGAGCGCGGCCGAAAGCCTCGACGAGCGTATGGCCGGGCAGATGCCTTCCACCAAAGGGTGCCTGTAAATGCAAACGGTAGCCGTAATCGACTATGGCATGGGTAACCTGCACTCGGTGGCCAAGGCGCTTGA < 2:330884/149‑1 GCCGAAAGCCTCGACGAGCGTATGGCCGGGCAGATGCCTTCCACCAAAGGGTGCCTGTAAATGCAAACGGTAGCCGTAATCGACTATGGCATGGGTAACCTGCACTCGGTGGCCAAGGCGCTTGAGCACGTAGGTGCCGGTAAAGTGCT < 1:9239/149‑1 AAGCGCCTTGGCCACCGAGTGCAGGTTACCCATGCCATAGTCGATTACGGCTACCGTTTGCATTTACAGGCACCCTTTGGTGGAAGGCATCTGCCCGGCCATACGCTCGTCGAGGGTGATGGCCATGCGCAGAGCGCGGCCGAAAGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/350650‑350502‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctCGACGAGCGTATGGCCGGGCAGATGCCTTCCACCAAAGGGTGCCTGTAAATGCAAACGGTAGCCGTAATCGACTATGGCATGGGTAACCTGCACTCGGTGGCCAAGGCGCTTGAGCACGTAGGTGCCGGTAAAGTGCT > NC_002947/350539‑350676 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |