New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	673144 =	62 (1.050)	3 (0.050)	3/252	NT	5.3%	coding (376/777 nt)	PP_0574	LuxR family transcriptional regulator
	?	NC_002947	673185 =	48 (0.850)					coding (335/777 nt)	PP_0574	LuxR family transcriptional regulator

CAACGGCAGCCAGCGCACGTTCGAAGCCATCATGTTGACAGGGCGTGCCGAGAAACAGGACTTGATCCGGGCGATACGCGAAGGTTTTGCCGATTACTACCAGAAGCCGATGGACCTTGATGAACTGCTGGCAGGCGTCCGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/673289‑673144 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcTTCTGGTAGTAATCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCG  >  NC_002947/673185‑673327                                                                                                                                                                                                                                                                                                   CAACGGCAGCCAGCGCACGTTCGAAGCCATCATGTTGACAGGGCGTGCCGAGAAACAGGACTTGATCCGGGCGATACGCGAAGGTTTTGCCGATTACTACCAGAAGCCGATGGACCTTGATGAACTGCTGGCAGGCGTCCGTCGGC                                                                                                                                                 >  5:245395/1‑146                                                       ACAGGACTTGATCCGGGCGATACGCGAAGGTTTTGCCGATTACTACCAGAAGCCGATGGACCTTGATGAACTGCTGGCAGGCGTCCGT                                                                                                                                                     <  3:262460/88‑1                                                       ACAGGACTTGATCCGGGCGATACGCGAAGGTTTTGCCGATTACTACCAGAAGCCGATGGACCTTGATGAACTGCTGGCAGGCGTCCGT                                                                                                                                                     >  4:262460/1‑88                                                                                                    CCAGAAGCCGATGGACCTTGATGAACTGCTGGCAGGCGTCCGTCGGCTTCTGGTAGTAATCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCG                                           >  5:318507/1‑149                                                                                                      AGAAGCCGATGGACCTTGATGAACTGCTGGCAGGCGTCCGTCGGCTTCTGGTAGTAATCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCCGTCATCATGATGGCTTCGAACGTGCGCTGGCTGCCGTT                                         >  7:250949/1‑149                                                                                                          GCCGATGGACCTTGATGAACTGCTGGCAGGCGTCCGTCGGCTTCTGGTAGTAATCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATT                                     >  1:171648/1‑149                                                                                                                                              TCGGCTTCTGGTAGTAATCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGATCGATGCCATCCCG  >  7:123153/1‑148                                                                                                                                                                                                                                                                                                   CAACGGCAGCCAGCGCACGTTCGAAGCCATCATGTTGACAGGGCGTGCCGAGAAACAGGACTTGATCCGGGCGATACGCGAAGGTTTTGCCGATTACTACCAGAAGCCGATGGACCTTGATGAACTGCTGGCAGGCGTCCGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/673289‑673144 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcTTCTGGTAGTAATCGGCAAAACCTTCGCGTATCGCCCGGATCAAGTCCTGTTTCTCGGCACGCCCTGTCAACATGATGGCTTCGAACGTGCGCTGGCTGCCGTTGATTTCCTTCAAGGCGCGCACCAGCTCGATGCCATCCCG  >  NC_002947/673185‑673327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.