| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 887381 = | 65 (1.100) | 4 (0.070) | 4/248 | NT | 6.0% | coding (415/1608 nt) | PP_0768 | TPR domain‑containing response regulator |
| ? | NC_002947 | 887456 = | 63 (1.130) | coding (490/1608 nt) | PP_0768 | TPR domain‑containing response regulator | |||||
TTGAGGAATTTTTCCAGTTCCTCGAAACGGTTGAGGTTGCGCAGGGCATCGGCCCGGTAGCGCAAGCACAAGGGCGCCAGGCGCGGATCCTTCTTGCACAGCTCGGCGCAGGCCGCCAGTACTTCGGCCGGACGGTTGCGGTCCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/887532‑887381‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctgGCGCCCTTGTGCTTGCGCTACCGGGCCGATGCCCTGCGCAACCTCAACCGTTTCGAGGAACTGGAAAAATTCCTCAAGGCCATCCTGGCCAGCCGTCCTCAGCCATGGGTATACGCCGCGTTGGGCGCACTGATGCACAAGCGTG > NC_002947/887456‑887600 TTGAGGAATTTTTCCAGTTCCTCGAAACGGTTGAGGTTGCGCAGGGCATCGGCCCGGTAGCGCAAGCACAAGGGCGCCAGGCGCGGATCCTTCTTGCACAGCTCGGCGCAGGCCGCCAGTACTTCGGCCGGACGGTTGCGGTCCAGCGC > 2:20098/1‑149TTGAGGAATTTTTCCAGTTCCTCGAAACGGTTGAGGTTGCGCAGGGCATCGGCCCGGTAGCGCAAGCACAAGGGCGCCAGGCGCGGATCCTTCTTGCACAGCTCGGCGCAGGCCGCCAGTACTTCGGCCGGACGGTTGCGGTCCAGCG > 5:270648/1‑148 GCCAGGCGCGGATCCTTCTTGCACAGCTCGGCGCAGGCCGCCAGTACTTCGGCCGGACGGTTGCGGTCCAGCGCCTGGCGCCCTTGTGCTTGCGCTACCGGGCCGATGCCCTGCGCAACCTCAACCGTTTCGAGGAACTGGAAAAATT > 4:5221/1‑148 AGGCGCGGATCCTTCTTGCACAGCTCGGCGCAGGCCGCCAGTACTTCGGCCGGACGGTTGCGGTCCAGCGCCTGGCGCCCTTGTGCTTGCGCTACCGGGCCGATGCCCTGCGCAACCTCAACCGTTTCGAGGAACTGGAAAAATTCCT > 7:171206/1‑148 CTTGCACAGCTCGGCGCAGGCCGCCAGTACTTCGGCCGGACGGTTGCGGTCCAGCGCCTGGCGCCCTTGTGCTTGCGCTACCGGGCCGATGCCCTGCGCAACCTCAACCGTTTCGAGGAACTGGAAAAATTCCTCAAGGCCATCCTG < 8:171206/147‑1 CACAGCTCGGCGCAGGCCGCCAGTACTTCGGCCGGACGGTTGCGGTCCAGCGCCTGGCGCCCTTGTGCTTGCGCTACCGGGCCGATGCCCTGCGCAACCTCAACCGTTTCGAGGAACTGGAAAAATTCCTCAAGGCCATCCTGGCCAG < 3:5221/148‑1 CCTGGCGCCCTTGTGCTTGCGCTACCGGGCCGATGCCCTGCGCAACCTCAACCGTTTCGAGGAACTGGAAAAATTCCTCAAGGCCATCCTGGCCAGCCGTCCTCAGCCATGGGTATACGCCGCGTTGGGCGCACTGATGCACAAGCGTG < 4:21192/149‑1 TTGAGGAATTTTTCCAGTTCCTCGAAACGGTTGAGGTTGCGCAGGGCATCGGCCCGGTAGCGCAAGCACAAGGGCGCCAGGCGCGGATCCTTCTTGCACAGCTCGGCGCAGGCCGCCAGTACTTCGGCCGGACGGTTGCGGTCCAGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/887532‑887381‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctgGCGCCCTTGTGCTTGCGCTACCGGGCCGATGCCCTGCGCAACCTCAACCGTTTCGAGGAACTGGAAAAATTCCTCAAGGCCATCCTGGCCAGCCGTCCTCAGCCATGGGTATACGCCGCGTTGGGCGCACTGATGCACAAGCGTG > NC_002947/887456‑887600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |