New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	996780 =	52 (0.880)	4 (0.070)	4/248	NT	8.3%	coding (816/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit
	?	NC_002947	996841 =	39 (0.700)					coding (755/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit

ACGCGCCGGCTGCGGGCCAGCAGCAAAAACGGGGTGAAGGCCGTGGCCGGCACGGGCCGCAGAACGTCGACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/996931‑996780 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccaccACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCCGCAGCCGGCGCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGG  >  NC_002947/996841‑996988                                                                                                                                                                                                                                                                                                              ACGCGCCGGCTGCGGGCCAGCAGCAAAAACGGGGTGAAGGCCGTGGCCGGCACGGGCCGCAGAACGTCGACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTCC                                                                                                                                                         <  3:40247/149‑1    CGCCGGCTGCGGGCCAGCAGCAAAAACGGGGTGAAGGCCGTGGCCGGCACGGGCCGCAGAACGTCGACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTCCACC                                                                                                                                                      <  6:50923/149‑1                                     AAGGCCGTGGCCGGCACGGGCCGCAGAACGTCGACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTCCAC                                                                                                                                                       >  6:198521/1‑115                                     AAGGCCGTGGCCGGCACGGGCCGCAGAACGTCGACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTCCAC                                                                                                                                                       <  5:198521/115‑1                                                                      ACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTC                                                                                                                                                          <  4:35746/79‑1                                                                      ACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTC                                                                                                                                                          >  3:35746/1‑79                                                                           AATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTCC                                                                                                                                                         >  4:351578/1‑75                                                                           AATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTCC                                                                                                                                                         <  3:351578/75‑1                                                                                          GTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCC                                                                                                           >  1:309392/1‑106                                                                                          GTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCC                                                                                                           <  2:309392/106‑1                                                                                            GGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCCGCAGCCGGCG                                                              >  2:333833/1‑149                                                                                                                               ACGCCGCGGGCCCAGGCCTGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCCGCAGCCGGCGCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTAC                           <  1:333833/149‑1                                                                                                                                                  GTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCCGCAGCCGGCGCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACA        <  1:178766/149‑1                                                                                                                                                  GTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCCGCAGCCGGCGCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACA        <  7:278362/149‑1                                                                                                                                                  GTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCCGCAGCCGGCGCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAA          >  3:268155/1‑147                                                                                                                                                     CACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCCGCAGCCGGCGCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGC      <  6:17002/148‑1                                                                                                                                                      ACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCCGCAGCCGGCGCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCC    >  3:145405/1‑149                                                                                                                                                       CCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCCGCAGCCGGCGCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCG   <  1:91040/149‑1                                                                                                                                                        CACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCCGCAGCCGGCGCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGG  >  6:186398/1‑149                                                                                                                                                                                                                                                                                                              ACGCGCCGGCTGCGGGCCAGCAGCAAAAACGGGGTGAAGGCCGTGGCCGGCACGGGCCGCAGAACGTCGACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCCAACCTCAAGGACGCCGCGGGCCCAGGCCTGTCCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/996931‑996780 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtccaccACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCCGCAGCCGGCGCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGG  >  NC_002947/996841‑996988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.