| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1107606 | 57 (0.970) | 4 (0.070) | 4/252 | NT | 7.2% | coding (758/1047 nt) | hisC | histidinol‑phosphate aminotransferase |
| ? | NC_002947 | = 1107644 | 48 (0.850) | coding (796/1047 nt) | hisC | histidinol‑phosphate aminotransferase | |||||
GTTACCCAGACGCTGTCGAAGTCGCGCTCGCTGGCGGGGCTACGAGTGGGCCTGGCGGTGGGGCATCCGGACCTGATCGAGGCGTTGGAGCGGATCAAGAACAGCTTCAACTCCTATCCACTGGACCGTGCAGCTATCGTCGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1107458‑1107606‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcAGGTTTCCTCGAAGTACTCACGGTCTTCGAACGCCACCGCCGCGCCGACGATAGCTGCACGGTCCAGTGGATAGGAGTTGAAGCTGTTCTTGATCCGCTCCAACGCCTCGATCAGGTCCGGATGCCCCACCGCCAGGCCCACTCGT < NC_002947/1107644‑1107499 GTTACCCAGACGCTGTCGAAGTCGCGCTCGCTGGCGGGGCTACGAGTGGGCCTGGCGGTGGGGCATCCGGACCTGATCGAGGCGTTGGAGCGGATCAAGAACAGCTTCAACTCCTATCCACTGGACCGTGCAGCTATCGTCGGCGCGGC > 8:275527/1‑149 GCGCTCGCTGGCGGGGCTACGAGTGGGCCTGGCGGTGGGGCATCCGGACCTGATCGAGGCGTTGGAGCGGATCAAGAACAGCTTCAACTCCTATCCACTGGACCGTGCAGCTATCGTCGGCGCGGCAGGGTTCCTCGAAGTACTCACGG > 8:227937/1‑149 TGGGCCTGGCGGTGGGGCATCCGGACCTGATCGAGGCGTTGGAGCGGATCAAGAACAGCTTCAACTCCTATCCACTGGACCGTGCAGCTATCGTCGGCGCGGCAGGTTTCCTCGAAGTACTCACGGTCTTCGAACGCCACCGCCGCGCC < 3:331628/149‑1 GGCCTGGCGGTGGGTCATCCGGAGCTGATCGAGGCGTTGGAGCGGAGCTAGAACAGCTTCAACTCCTATCCACTGGACCGTGCAGCTATCGTCGGCGCGGCAGGTTTCCTCGAAGTACTCACGGTCTTCGAACGCCACCGCCGCGCCGA < 8:335352/149‑1 GCGGTGGGGCATCCGGACCTGATCGAGGCGTTGGAGCGGATCAAGAACAGCTTCAACTCCTATCCACTGGACCGTGCAGCTATCGTCGGCGCGGCAGGTTTCCTCGAAGTACTCACGGTCTTCGAACGCCACCGCCGCGCCGACGATAG < 7:227937/149‑1 GCGGCAGGTTTCCTCGAAGTACTCACGGTCTTCGAACGCCACCGCCGCGCCGACGATAGCTGCACGGTCCAGTGGATAGGAGTTGAAGCTGTTCTTGATCCGCTCCAACGCCTCGATCAGGTCCGGATGCCCCACCGCCAGGCCCACT < 7:47441/148‑1 CGGCAGGTTTCCTCGAAGTACTCACGGTCTTCGAACGCCACCGCCGCGCCGACGATAGCTGCACGGTCCAGTGGATAGGAGTTGAAGCTGTTCTTGATCCGCTCCAACGCCTCGATCAGGTCCGGATGCCCCACCGCCAGGCCCACTCG < 7:17935/149‑1 GGCAGGTTTCCTCGAAGTACTCACGGTCTTCGAACGCCACCGCCGCGCCGACGATAGCTGCACGGTCCAGTGGATAGGAGTTGAAGCTGTTCTTGATCCGCTCCAACGCCTCGATCAGGTCCGGATGCCCCACCGCCAGGCCCACTCGT > 3:207942/1‑149 GTTACCCAGACGCTGTCGAAGTCGCGCTCGCTGGCGGGGCTACGAGTGGGCCTGGCGGTGGGGCATCCGGACCTGATCGAGGCGTTGGAGCGGATCAAGAACAGCTTCAACTCCTATCCACTGGACCGTGCAGCTATCGTCGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1107458‑1107606‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcAGGTTTCCTCGAAGTACTCACGGTCTTCGAACGCCACCGCCGCGCCGACGATAGCTGCACGGTCCAGTGGATAGGAGTTGAAGCTGTTCTTGATCCGCTCCAACGCCTCGATCAGGTCCGGATGCCCCACCGCCAGGCCCACTCGT < NC_002947/1107644‑1107499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |