| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1120328 | 61 (1.040) | 4 (0.070) | 4/244 | NT | 6.5% | intergenic (‑70/‑232) | pepA/PP_0982 | cytosol aminopeptidase/YjgP/YjgQ family permease |
| ? | NC_002947 | = 1120403 | 58 (1.060) | intergenic (‑145/‑157) | pepA/PP_0982 | cytosol aminopeptidase/YjgP/YjgQ family permease | |||||
CGAGCTTGCGGTTTTCACCTACCGGAAGGACCAGTGTGGCGGTTTTTACGGATGCAGCAGCTACGCTTTTTACAACCAGTTCCATGTCAGGATCCCCGAATGATCGATACGAATGGCGCTGTGTGTTCCAGCGCTCTGGACGGGCCTGGCCGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1120174‑1120328‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgcgtACGAAGGCGCACATCGGGGTTGTCAGCACGCTTGCCACAGGCTCAAACTGGCAGCTTTTCCGCTGGTGCGCGACGACGCGGCCAGGCCCGTCCAGAGCGCTGGAACACACAGCGCCATTCGTATCGATCATTCGGGGATCCTGACAT < NC_002947/1120403‑1120257 CGAGCTTGCGGTTTTCACCTACCGGAAGGACCAGTGTGGCGGTTTTTACGGATGCAGCAGCTACGCTTTTTACAACCAGTTCCATGTCAGGATCCCCGAATGATCGATACGAATGGCGCTGTGTGTTCCAGCGCTCTGGACGTGCCTGG > 6:264501/1‑149CGAGCTTGCGGTTTTCACCTACCGGAAGGACCAGTGTGGCGGTTTTTACGGATGCAGCAGCTACGCTTTTTACAACCAGTTCCATGTCAGGATCCCCGAATGATCGATACGAATGGCGCTGTGTGTTCCAGCGCTCTGGACGGGCCTGG > 5:13647/1‑149 cAGCGTGCGGTTATCACCTACCCGAAGGACCAGTGTGGCGGTTTTTACGGATCCCCCAGCTACGCTTTTAACAACCAGTTCCATGTCAGGATCCCCGAATGATCGATACGAATGGCGCTGTGTGTTCCAGCGCTCTGGACGGGCCTGGC < 8:53058/148‑1 CTTGCGGTTTTCACCTACCGGAAGGACCAGTGTGGCGGTTTTTACGGATGCAGCAGCTACGCTTTTTACAACCAGTTCCATGTCAGGATCCCCGAATGATCGATACGAATGGCGCTGTGTGTTCCAGCGCTCTGGACGGGCCTGGCCGC > 4:9900/1‑149 CCTACCGGAAGGACCAGTGTGGCGGTTTTTACGGATGCAGCAGCTACGCTTTTTACAACCAGTTCCATGTCAGGATCCCCGAATGATCGATACGAATGGCGCTGTGTGTTCCAGCGCTCTGGACGGGCCTGGCCGCGTACGAAGGCGCA > 3:138797/1‑149 GGATGCAGCAGCTACGCTTTTTACAACCAGTTCCATGTCAGGATCCCCGAATGATCGATACGAATGGCGCTGTGTGTTCCAGCGCTCTGGACGGGCCTGGCCGCGTACGAAGGCGCACATCGGGGTTGTCAGCACGCTTGCCACAGGCT > 6:79644/1‑149 GATCCCCGAATGATCGATACGAATGGCGCTGTGTGTTCCAGCGCTCTGGACGGGCCTGGCCGCGTACGAAGGCGCACATCGGGGTTGTCAGCACGCTTGCCACAGGCTCAAACTGGCTGCTTTTCCGCTGGTGCGGGAGGACGCGGCCA < 4:138797/149‑1 ATCCCCGAATGATCGATACGAATGGCGCTGTGTGTTCCAGCGCTCTGGACGGGCCTGGCCGCGTACGAAGGCGCACATCGGGGTTGTCAGCACGCTTGCCACAGGCTCAAACTGGCAGCTTTTCCGCTGGTGCGCGACGACGCGGCCAG < 5:79644/149‑1 GCGTACGAAGGCGCACATCGGGGTTGTCAGCACGCTTGCCACAGGCTCAAACTGGCAGCTTTTCCGCTGGTGCGCGACGACGCGGCCAGGCCCGTCCAGAGCGCTGGAACACACAGCGCCATTCGTATCGATCATTCGGGGATCCTGA > 1:169909/1‑148 GCGTACGAAGGCGCACATCGGGGTTGTCAGCACGCTTGCCACAGGCTCAAACTGGCAGCTTTTCCGCTGGTGCGCGACGACGCGGCCAGGCCCGTCCAGAGCGCTGGAACACACAGCGCCATTCGTATCGATCATTCGGGGATCCTGA > 2:175482/1‑148 GTACGAAGGCGCACATCGGGGTTGTCAGCACGCTTGCCACAGGCTCAAACTGGCAGCTTTTCCGCTGGTGCGCGACGACGCGGCCAGGCCCGTCCAGAGCGCTGGAACACACAGCGCCATTCGTATCGATCATTCGGGGATCCTGACAT > 3:46301/1‑149 CGAGCTTGCGGTTTTCACCTACCGGAAGGACCAGTGTGGCGGTTTTTACGGATGCAGCAGCTACGCTTTTTACAACCAGTTCCATGTCAGGATCCCCGAATGATCGATACGAATGGCGCTGTGTGTTCCAGCGCTCTGGACGGGCCTGGCCGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1120174‑1120328‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccgcgtACGAAGGCGCACATCGGGGTTGTCAGCACGCTTGCCACAGGCTCAAACTGGCAGCTTTTCCGCTGGTGCGCGACGACGCGGCCAGGCCCGTCCAGAGCGCTGGAACACACAGCGCCATTCGTATCGATCATTCGGGGATCCTGACAT < NC_002947/1120403‑1120257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |