New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1136258 = | 73 (1.240) | 4 (0.070) | 3/248 | NT | 5.9% | coding (717/1509 nt) | PP_0997 | sigma‑54 dependent transcriptional regulator/sensory box protein |
? | NC_002947 | 1136328 = | 58 (1.040) | coding (647/1509 nt) | PP_0997 | sigma‑54 dependent transcriptional regulator/sensory box protein |
AAGGCTTCGATGCCTTGCTGGGCGAGTCGCCGGCCATCCGCACCCTCAAGGCCCGCGCCTTACGCGTGGCTGCGCTCGATGCACCGCTGCTGGTGCATGGCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1136412‑1136258 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGG > NC_002947/1136328‑1136465 AAGGCTTCGATGCCTTGCTGGGCGAGTCGCCGGCCATCCGCACCCTCAAGGCCCGCGCCTTACGCGTGGCTGCGCTCGATGCACCGCTGCTGGTGCATGGCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTC < 4:195945/149‑1 GGCTTCGATGCCTTGCTGGGCGAGTCGCCGGCCATCCGCACCCTCAAGGCCCGCGCCTTACGCGTGGCTGCGCTCGATGCACCGCTGCTGGTGCATGGCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTCAG > 7:41502/1‑149 GCTTCGATGCCTTGCTGGGCGAGTCGCCGGCCATCCGCACCCTCAAGGCCCGCGCCTTACGCGTGGCTGCGCTCGATGCACCGCTGCTGGTGCATGGCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTCAGC < 8:85891/149‑1 GCTTCGATGCCTTGCTGGGCGAGTCGCCGGCCATCCGCACCCTCAAGGCCCGCGCCTTACGCGTGGCTGCGCTCGATGCACCGCTGCTGGTGCATGGCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTCAG > 1:69090/1‑148 TTCGATGCCTTGCTGGGCGAGTCGCCGGCCATCCGCACCCTCAAGGCCCGCGCCTTACGCGTGGCTGCGCTCGATGCACCGCTGCTGGTGCATGGCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTCAGCAG > 1:279447/1‑149 TTCGATGCCTTGCTGGGCGAGTCGCCGGCCATCCGCACCCTCAAGGCCCGCGCCTTACGCGTGGCTGCGCTCGATGCACCGCTGCTGGTGCATGGCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTCAGCAG > 5:348110/1‑149 ACCGCTGCTGGTGCATGGCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCAT > 2:354948/1‑149 CCGCTGCTGGTGCATGGCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTCAGCAGCGGTGCATCGAGTGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATC > 6:164166/1‑149 CCGCTGCTGGTGCATGGCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATC > 3:207166/1‑149 GCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTCAGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTG < 4:207166/148‑1 CCGTCAGCAGCGGTGCATCGAGTGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGG < 5:164166/149‑1 AGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTTGTGCAGGGCCGACAGGCGTTC < 4:75257/125‑1 AGCAGCGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTC > 3:75257/1‑125 AAGGCTTCGATGCCTTGCTGGGCGAGTCGCCGGCCATCCGCACCCTCAAGGCCCGCGCCTTACGCGTGGCTGCGCTCGATGCACCGCTGCTGGTGCATGGCGAGACCGGCACCGGTAAAGAACTGGTAGCCCGCGCCTGCCATGCCGTCAGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1136412‑1136258 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcagcGGTGCATCGAGCGCAGCCACGCGTAAGGCGCGGGCCTTGAGGGTGCGGATGGCCGGCGACTCGCCCAGCAAGGCATCGAAGCCTTCGGCGTGGTCGTGGTGCAGGGCCGACAGGCGTTCGCCCATACGCGAAGGTGGG > NC_002947/1136328‑1136465 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |