New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1338751	69 (1.170)	4 (0.070)	4/244	NT	5.6%	coding (1467/2037 nt)	PP_1163	FAD‑binding oxidoreductase
	?	NC_002947	= 1338779	70 (1.280)					coding (1495/2037 nt)	PP_1163	FAD‑binding oxidoreductase

ATCGGCGCGGGCGTGGGCATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTGGCCGACTTGCCGTTCCAGCAGGAACTGGCGGCCTTGCGGCAACAGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1338596‑1338751 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggctggcTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTGTTGCCGCAAGGCCGCCAGTTCCTGCTGGAACGGCAAGTCGGCCAGGCTGCGTGCGCCATGGAACAGATGAATGCGCCGGGCCTGCCCTGTCCTCAACTGCTGGCGCAGC  <  NC_002947/1338779‑1338634                                                                                                                                                                                                                                                                                                                ATCGGCGCGGGCGTGGGCATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTGGCCGACTTGCCGTTCCAGCAGGAACTGGCGGCCTTGCGGCAAC                                                                                                                                                            <  1:12463/148‑1        CGGGCGTGGGCATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTGGCCGACTTGCCGTTCCAGCAGGAACTGGCGGCCTTGCGGCAACAGGCTGGC                                                                                                                                                    >  3:105324/1‑149                 GCATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTGGCCGACTTGCCGTTCCAGCAGGAACTGGCGGCCTTGCGGCAACAGGCTGGCTCAGTGCGC                                                                                                                                           >  7:329555/1‑149                                        CTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTGGCCGACTTGCCGTTCCAGCAGGAACTGGCGGCCTTGCGGCAACAGGCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCC                                                                                                                     <  8:329555/148‑1                                             CCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTGGCCGACTTGCCGTTCCAGCAGGAACTGGCGGCCTTGCGGCAACAGGCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTG                                                                                                               >  5:154772/1‑149                                             CCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTGGCCGACTTGCCGTTCCAGCAGGAACTGGCGGCCTTGCGGCAACAGGCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTG                                                                                                               <  6:154772/149‑1                                                                                                                                                    CAGGCTGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTGTTGCCGCAAGGCCGCCAGTTCCTGCTGGAACGGCAAGTCGGCCAGGCTGCGTGCGCCATGGAACAGATGAATGCGCCGGGCCTGCCCTGTCCTCAACTGCTG         <  2:78313/148‑1                                                                                                                                                         TGGCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTGTTGCCGCAAGGCCGCCAGTTCCTGCTGGAACGGCAAGTCGGCCAGGCTGAGTGCGCCATGGAACAGATGAATGCGCCGGGCCTGCCCTGTCCTCAACTGCTGGCGCAG   >  5:187059/1‑149                                                                                                                                                           GCTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTGTTGCCGCAAGGCCGCCAGTTCCTGCTGGAACGGCAAGTCGGCCAGGCTGCGTGCGCCATGGAACAGATGAATGCGCCGGGCCTGCCCTGTCCTCAACTGCTGGCGCAGC  <  2:55093/148‑1                                                                                                                                                                                                                                                                                                                ATCGGCGCGGGCGTGGGCATCACGCCGTTGCTGGCCATGCTGCGCCAGCAGTTGAGGACAGGGCAGGCCCGGCGCATTCATCTGTTCCATGGCGCACGCAGCCTGGCCGACTTGCCGTTCCAGCAGGAACTGGCGGCCTTGCGGCAACAGGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1338596‑1338751 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggctggcTCAGTGCGCGGTGTACCTGCAGTAGATCGCCAGCCTGTTGCCGCAAGGCCGCCAGTTCCTGCTGGAACGGCAAGTCGGCCAGGCTGCGTGCGCCATGGAACAGATGAATGCGCCGGGCCTGCCCTGTCCTCAACTGCTGGCGCAGC  <  NC_002947/1338779‑1338634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.